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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:872635..875737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042401 ID=XLOC_042401|Name=XLOC_042401|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3103bp|location=Sequence derived from alignment at sc0000001_pilon:872635..875737+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCTTCGACATCATCAAGTCAGACATCAAGTCAGACATCAATATCTTC
GACATCAAGTCAGACATCAATATCTCCGAAATCAATTCAGGCATCAATAT
TTTCGACATCAAGTCAGATGTCAATTCAGGCTTCAATATCTTCGACATCA
AGTCAGATGTCAATATCTACAACATCAAGTCAGACATCAATATCTTCGAC
ATCAAGTCAGACATCAACATCTTCGACATCAAGCCAGACGTCAATATCTC
CGACATCAAGTCAGACATCAATATCTTCGACATCAAGTCAGATGTCGATA
TCACAGATATCAAGTCAGACATCAATATCTCCGACATCAAGTCAGACGTC
AATATCTCCGACATCAAGTCAGACATCAATATCTTCGACATCAAGTCAGA
TGTCGATATCACAGATATCAAGTCAGACATCAATATCTCCGACATCAAGT
CAGACGTCAATATCTCCGACATCAAGTCAGACATCAAATCTTCGACATCA
AGTCAGATGTCCTCACATCAAGTCAGACATCAATATCTTCGACATCAAGT
CAGATGTCAATATCTCCAACATCAAGTCAGACATCAATATCTCCGACATC
AAGTCAGACGTCAATATTTCCGACATCAAGTCAGACATCAATATCTCCGA
CATCAAATCAGATGTCAATATCTCCAACTTCAAGTCAGACATCAATATCT
TCGACATCAAGTCAGATGTCAATATCTCCAACATCAAGTCATACATCAAT
ATCTTCGACATCATCAAGTCAGACATCAATTCAGGCATCAATATCTTCGA
CATCAAGTCAGATGTCAATATCTCCGAGATCAAGTCAGTTATCAATATCT
TCGACATCAGGTCAGACATCAATTCAGGCATCAATATCTTCGACATCAAG
TCTGATGTCAATATCTCTGACATCAATTCAAGCATCAATATCTTCGACAT
CAAGTCAGACATCAATATCTCCGACACCAAGTCAGACATTGACATCTTTA
ACGTCAAATCATATGTCAACATCTCCTTTATCAATACAGACATCAAGTCA
GATATTGACATCTTCGACGTCAAGTCAGGCATCAATATCTCCGACATCAA
TACAGCTATCAACATCTCCGACACTAAGTCAGACGTCAATATCTTCGACA
TCGAGTCAGACATCAATATTATTTTCTGATTCTGTATTCTCGACGACAAT
AACTGAAGTAGAAACTTCAAACAGAGAATCTTCTCAAGTATTTGCAACTG
CTCCAAAATCACAGCAGATGGAACCAGAGATACAAGGATCGGGCTCTTCA
TTTAGTAACACCGACTCAATATCAACATTCAGTTGGCCACAAGTTACACT
GTCATCAATGACATCTCCAGAGAATTTTACTCTAGAAATGGTTACCACAA
CAGATGCAGATCCAACAGATCTCTTATCCACGACTGGAGTACAAGAAACA
AAAGCAATGTCGAGTCCAGTACCCAATATCAATGATTCATCACTACCAAT
GACAACAGTGAATTTAATACCATCGAGTTTACCAGAAACACTAGTAAACC
AATCTCAATCAATACCGTCCACCCAGTCCTTATCACCAACACCCATTCTA
CAGGAGCATACGCCCTCTTTTCAATCGTCCATCCGATTCAATAGCGCCGT
ACCCAATAACTATTCCCAACTCCAAACAAACCAGACTATATTGTCACATT
CAAGCATATCAGGgacttcttttcttctttcactTTTCACATCCGTCAAC
TCAAACCAATTCACATGCTTGTGCCAACCTTCAGTTTCCGGCTCACCATC
GCAAACTATATTCTCTGGTATTAACAATCAAAACTCCTCTACACTTGAGA
ACAACTCAACCTCTCCTCAATTAACAGGCCCTGTCATTTCCTCATTGAAc
tccattcctatcacctccaactccattcctatcacctccAactCcattcc
tatcacctccaACtccactccTatcacctccaactccattcctatcactt
ccaactccattcctATCACCTCCAACCACCTGCAAACATCTGAGTCATCT
TCACATTTTACAGAAAATATTCAACACACAGGCATCTTTTCTTCTCGTTC
TTTCTTAACTTCTTCCGAATCAAGGAAGTATTCATCGCAAACTATATCCT
CTGGTACTAACAATCAAAACTCTTCTACTCTCGAGAACAACTCAACCTCT
CCTCAATTAACAAGCCCTGCTATTTCCTCCATGAACTCCATTCCTATCAC
TTCCAACTCCATTCCTATCACCTCCGACCACCTGCAAACATCTGAGTCAT
TCTCACATGTTACAGAAAATAACCAACACACAGCCATCTTTTCCTCTCAT
TCTTTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGCTGGTGTTCTTC
TCCTGCACCCATCCCAACACAAACTGTTCAATATTCACAATCTTTTCAAA
CCACGACTCACACCCCAACGGCTGACCAAACCAATATACATACCCCTTCA
ACCTCTCAAACCACTAACCGCCCACCAGTCGCCCACCAGACCACTACCTA
TACTTCAACTCAAACCCCAGAAACACCCCAGACCACTACtcacaaccaat
cagctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCTCTTCAAGCAAC
AATAATCAAAATCAAGCAACAACTACACTTTCATATCTAGCAACTACCAA
CCTCGTCACAAATCAACCATCGAACCCATCTCTTTCACCAGACTCCAACT
CTATTGTTCCTACACGACCTTCTTCATCCACCCAACTTCCATTTACTACC
AGTGTACGCTCCCCATCGCTGCCCTACCAACCCTCCATCACTCCATCCTT
CTCTTCATCTTCAAGTGAAGCACTACAGAGTACACCCGCCCTTCCACAGA
CCCTTTCCACCAATCAGCTCTCTACCTCCATCATGTACCCTTTTATTACT
TCCACACCACCATTTATCTCAATAATGACACTCTCCTCTCTTTCCCTTTC
TTCAGCACTGATTAAAGCGACAACTTCTTCACTCCCAAACTCTTTTCTTA
CTTTTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTTTTCTTCAAGAT
GGT Coding sequence (CDS) from alignment at sc0000001_pilon:872635..875737+ >XLOC_042401 ID=XLOC_042401|Name=XLOC_042401|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4800bp|location=Sequence derived from alignment at sc0000001_pilon:872635..875737+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCTTCGACATCATCAAGTCAGACATCAAGTCAGACATCAATATCTTC
GACATCAAGTCAGACATCAATATCTCCGAAATCAATTCAGGCATCAATAT
TTTCGACATCAAGTCAGATGTCAATTCAGGCTTCAATATCTTCGACATCA
AGTCAGATGTCAATATCTACAACATCAAGTCAGACATCAATATCTTCGAC
ATCAAGTCAGACATCAACATCTTCGACATCAAGCCAGACGTCAATATCTC
CGACATCAAGTCAGACATCAATATCTTCGACATCAAGTCAGATATCTTCG
ACATCATCAAGTCAGACATCAAGTCAGACATCAATATCTTCGACATCAAG
TCAGACATCAATATCTCCGAAATCAATTCAGGCATCAATATTTTCGACAT
CAAGTCAGATGTCAATTCAGGCTTCAATATCTTCGACATCAAGTCAGATG
TCAATATCTACAACATCAAGTCAGACATCAATATCTTCGACATCAAGTCA
GACATCAACATCTTCGACATCAAGCCAGACGTCAATATCTCCGACATCAA
GTCAGACATCAATATCTTCGACATCAAGTCAGACATCAAGTCAGACGTCA
ATATTTCCGACATCAAGTCAGACATCAATATCTCCGACATCAAATCAGAT
GTCAATATCTCCAACTTCAAGTCAGACATCAATATCTTCGACATCAAACA
TCAAGTCAGACGTCAATATTTCCGACATCAAGTCAGACATCAATATCTCC
GACATCAAATCAGATGTCAATATCTCCAACTTCAAGTCAGACATCAATAT
CTTCGACATCAAGTCAGATATTGACATCTTCGACGTCAAGTCAGGCATCA
ATATCTCCGACATCAATACAGCTATCAACATCTCCGACACTAAGTCAGAC
GTCAATATCTTCGACATCGAGTCAGACATCAATATTATTTTCTGATTCTG
TATTCTCGACGACAATAACTGAAGTAGAAACTTCAAACAGAGAATCTTCT
CAAGTATTTGCAACTGCTCCAAAATCACAGCAGATGGAACCAGAGATACA
AGGATCGGGCTCTTCATTTAGTAACACCGACTCAATATCAACATTCAGTT
GGCCACAAGTTACACTGTCATCAATGACATCTCCAGAGAATTTTACTCTA
GAAATGGTTACCACAACAGATGCAGATCCAACAGATCTCTTATCCACGAC
TGGAGTACAAGAAACAAAAGCAATGTCGAGTCCAGTACCCAATATCAATG
ATTCATCACTACCAATGACAACAGTGAATTTAATACCATCGAGTTTACCA
GAAACACTAGTAAACCAATCTCAATCAATACCGTCCACCCAGTCCTTATC
ACCAACACCCATTCTACAGGAGCATACGCCCTCTTTTCAATCGTCCATCC
GATTCAATAGCGCCGTACCCAATAACTATTCCCAACTCCAAACAAACCAG
ACTATATTGTCACATTCAAGCATATCAGGgacttcttttcttctttcact
TTTCACATCCGTCAACTCAAACCAATTCACATGCTTGTGCCAACCTTCAG
TTTCCGGCTCACCATCGCAAACTATATTCTCTGGTATTAACAATCAAAAC
TCCTCTACACTTGAGAACAACTCAACCTCTCCTCAATTAACAGGCCCTGT
CATTTCCTCATTGAActccattcctatcacctccaactccattcctatca
cctccAaGTCAGATATTGACATCTTCGACGTCAAGTCAGGCATCAATATC
TCCGACATCAATACAGCTATCAACATCTCCGACACTAAGTCAGACGTCAA
TATCTTCGACATCGAGTCAGACATCAATATTATTTTCTGATTCTGTATTC
TCGACGACAATAACTGAAGTAGAAACTTCAAACAGAGAATCTTCTCAAGT
ATTTGCAACTGCTCCAAAATCACAGCAGATGGAACCAGAGATACAAGGAT
CGGGCTCTTCATTTAGTAACACCGACTCAATATCAACATTCAGTTGGCCA
CAAGTTACACTGTCATCAATGACATCTCCAGAGAATTTTACTCTAGAAAT
GGTTACCACAACAGATGCAGATCCAACAGATCTCTTATCCACGACTGGAG
TACAAGAAACAAAAGCAATGTCGAGTCCAGTACCCAATATCAATGATTCA
TCACTACCAATGACAACAGTGAATTTAATACCATCGAGTTTACCAGAAAC
ACTAGTAAACCAATCTCAATCAATACCGTCCACCCAGTCCTTATCACCAA
CACCCATTCTACAGGAGCATACGCCCTCTTTTCAATCGTCCATCCGATTC
AATAGCGCCGTACCCAATAACTATTCCCAACTCCAAACAAACCAGACTAT
ATTGTCACATTCAAGCATATCAGGgacttcttttcttctttcactTTTCA
CATCCGTCAACTCAAACCAATTCACATGCTTGTGCCAACCTTCAGTTTCC
GGCTCACCATCGCAAACTATATTCTCTGGTATTAACAATCAAAACTCCTC
TACACTTGAGAACAACTCAACCTCTCCTCAATTAACAGGCCCTGTCATTT
CCTCATTGAActccattcctatcacctccaactccattcctatcacctcc
AactccattcctATCACCTCCAACCACCTGCAAACATCTGAGTCATCTTC
ACATTTTACAGAAAATATTCAACACACAGGCATCTTTTCTTCTCGTTCTT
TCTTAACTTCTTCCGAATCAAGGAAGTATTCATCGCAAACTATATCCTCT
GGTACTAACAATCAAAACTCTTCTACTCTCGAGAACAACTCAACCTCTCC
TCAATTAACAAGCCCTGCTATTTCCTCCATGAACTCCATTCCTATCACTT
CCAACTCCATTCCTATCACCTCCGACCACCTGCAAACATCTGAGTCATTC
TCACATGTTACAGAAAATAACCAACACACAGCCATCTTTTCCTCTCATTC
TTTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGCTGGTGTTCTTCTC
CTGCACCCATCCCAACACAAACTGTTCAATATTCACAATCTTTTCAAACC
ACGACTCACACCCCAACGGCTGACCAAACCAATATACATACCCCTTCAAC
CTCTCAAACCACTAACCGCCCACCAGTCGCCCACCAGACCACTACCTATA
CTTCAACTCAAACCCCAGAAACACCCCAGACCACTACtcacaaccaatca
gctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCTCTTCAAGCAACAA
TAATCAAAATCAAGCAACAACTACACTTTCATATCTAGCAACTACCAACC
TCGTCACAAATCAACCATCGAACCCATCTCTTTCACCAGACTCCAACTCT
ATTGTTCCTACACGACCTTCTTCATCCACCCAACTTCCATTTACTACCAG
TGTACGCTCCCCATCGCTGCCCTACCAACCCTCCATCACTCCATCCTTCT
CTTCATCTTCAAGTGAAGCACTACAGAGTACACCCGCCCTTCCACAGACC
CTTTCCACCAATCAGCTCTCTACCTCCATCATGTACCCTTTTATTACTTC
CACACCACCATTTATCTCAATAATGACACTCTCCTCTCTTTCCCTTTCTT
CAGCACTGATTAAAGCGACAACTTCTTCACTCCCAAACTCTTTTCTTACT
TTTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTTTTCTTCAAGATGG
TctccattcctATCACCTCCAACCACCTGCAAACATCTGAGTCATCTTCA
CATTTTACAGAAAATATTCAACACACAGGCATCTTTTCTTCTCGTTCTTT
CTTAACTTCTTCCGAATCAAGGAAGTATTCATCGCAAACTATATCCTCTG
GTACTAACAATCAAAACTCTTCTACTCTCGAGAACAACTCAACCTCTCCT
CAATTAACAAGCCCTGCTATTTCCTCCATGAACTCCATTCCTATCACTTC
CAACTCCATTCCTATCACCTCCGACCACCTGCAAACATCTGAGTCATTCT
CACATGTTACAGAAAATAACCAACACACAGCCATCTTTTCCTCTCATTCT
TTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGCTGGTGTTCTTCTCC
TGCACCCATCCCAACACAAACTGTTCAATATTCACAATCTTTTCAAACCA
CGACTCACACCCCAACGGCTGACCAAACCAATATACATACCCCTTCAACC
TCTCAAACCACTAACCGCCCACCAGTCGCCCACCAGACCACTACCTATAC
TTCAACTCAAACCCCAGAAACACCCCAGACCACTACtcacaaccaatcag
ctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCTCTTCAAGCAACAAT
AATCAAAATCAAGCAACAACTACACTTTCATATCTAGCAACTACCAACCT
CGTCACAAATCAACCATCGAACCCATCTCTTTCACCAGACTCCAACTCTA
TTGTTCCTACACGACCTTCTTCATCCACCCAACTTCCATTTACTACCAGT
GTACGCTCCCCATCGCTGCCCTACCAACCCTCCATCACTCCATCCTTCTC
TTCATCTTCAAGTGAAGCACTACAGAGTACACCCGCCCTTCCACAGACCC
TTTCCACCAATCAGCTCTCTACCTCCATCATGTACCCTTTTATTACTTCC
ACACCACCATTTATCTCAATAATGACACTCTCCTCTCTTTCCCTTTCTTC
AGCACTGATTAAAGCGACAACTTCTTCACTCCCAAACTCTTTTCTTACTT
TTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTTTTCTTCAAGATGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:872635..875737 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1303-2400:2006 |
| Aaloc | 409-1299:1049 |
| Aaloc | 292-405:596 |
| Aaloc | 1-291:1 |
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