|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1151316..1157627+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042393 ID=XLOC_042393|Name=XLOC_042393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6312bp|location=Sequence derived from alignment at sc0000094_pilon:1151316..1157627+ (Clytia hemisphaerica_ch_hm2_pilon)
ACATCCAATGATCATTTTCAACGATACTTTCCGACGCATGCGCATAAAGA
AGAGATGGCAAACGAAAGAACCAAACAAACGGATTTCTTCTATCTCATTG
GAAGTGAGCAAACCAACGAATCCAAACGAGCTAGAACGACAGGTATCTTT
TCAAGCTGTCACATAAGGTTGTTTTAACGTCAATTTAAAGTTGTATGAAA
GTTGTCAAAAGACTGACCAAATTCGAGAAAATTCGAAATTCCTTTTCGAT
GAACACTCCATTAAGCTTTATGGGATCGTGATGAAAtcttaatgttttgt
ttttttctaaatccACTTTTTTCAATCATCTCTGTATAAATTTCCATACC
AGCTTCGGTCAGCTCTGCAGATTCAGCTTTGGGAACACCATCACCGTGGC
TTCAATCACCCCAAGCATATTCACCACCTTTGTCTTTGAATGCCGATATA
GAAAGCCCACCAGTGCCACAGGAGGCGCAAGCACCATCGCAGAATGCAGG
TACTTAATTCTCTTTCATAATACCAAGACTATGGACATATATCCATGATG
TTTATTTATGAGTACCATAAGTAGAGTATTTTGCTACAACGTTCATTGAA
GTTTGCCCAATCCCTAACATGcacactttaatttttttgctacttgtgat
attcatgacgtaatgttttgaaCGAAGGCACCCGGAATATCCCAGGAGTT
TGtcactagttttattgtttaaattcaaaactagtggcaaaaaCCCGGTC
TTTTTAGGTGCtttcgtataaaacattacatcataaatatcatgaaCTGA
TATTCAGGTGACGTTGCACATTTCTCGAACATCATTGCGGAACGTATTCA
AACGGAAACGTTAGAAGTTGGTGAAATTAAAGGGCAAGTCTTCACTACTC
CTCATCACGACattggctaccattttgaattgaatgatgatgaagaaaaa
ttCAATGAAGGTATATATGTGCAAACAATAATAATCCCTTGCTTACTgcc
ctggtggaactttttccaaaGCGGGGAAATAAGTTCTAGCGAAATCCTTA
TGGGAATGGAGATTCAATCGTCCCAAGCTaaaaaaagctagtggggatgg
ttttggagtgaaatCTTTcacaatgaatttcgaatggggatgaaatgaga
attaatttctcagtggggctgaagtTGTAGGGTATTGTTCCCATTATAGG
GCAAAACTTTAACCAAATTTCACATTAGGGTGAGGGTCCCACCGTGTTAg
ggacacaggggtgtatacaACATTGGGATCAAATTCGATGTCTAGGATAT
AGTAGAAAGACCCTTCTAGACCCTTCAGTTCAACGACTCATAAATAAGtc
tccaaaattcaaaatgtttttaactcgAACGAAATTGTCTTTCCCGTGTG
CGTTCTCTACTGCATCCGTATTTGAGGGCTTTGTGTCAACTTCAAACTTC
AAATTCTCGTGGCTGGTTAgttcagtcggtagagcattcaccTAACAATC
CAAAATCcaaaggttgtgggttcgatccccggtcaccgctaACTCAGTGA
ATGAGTAGCTtggattgggtaatctgatctaggtggCAAgctactgggag
ctgagaggaGGTGCGGCGCTCCACCTCCCAGGTCTAGGACACTTAGAAAG
GGGTTAGACTCCCTCTGCTGATAGCCGACAGAtgatttacttacttactt
aaccATTTTAGGGGAAGTTGTTGGTCTGTTACCAGATGGTGACGACAAAG
ATAAAGGAACTCAACGTTTACGTGTTGTGAAACTAACCAGTGAAACTGCA
AGTCAATGTAATCTCAAAGGTGTTATCACCAATTCACCGTACATTGAAGC
TTACTGCCCCAAGAAGGATtgtaagtgttttttttaatataagttGCTCA
GTGAGCAACTCATAATGAGCCTAATATTCCATACTATGAGTATCAAAAAC
ACACAACTGGTAAGCTTTAAGTCAGGATTCTGTTTGTATCGAAATAATGT
CGAAACAAAGgaaaatatatcattattagaataattgaaattgaCGATGC
AATAGTCTGACTTTtctgtgtttttatttttttcttcgatgCTCATTTCC
AATTTACATTaattgcaaccaatcagctgctgTGAGACTGACTTAATGTC
AATATACCCTACAGGGATAATTTTAGGTCGAAATATCGGTAAATTCAGGA
TTGATTTTGCCTCTATAACCTTCGCCTTCTCgttcgctagatttaaaaaa
catccaaaaatttagaCCAACAGAAAGTCGTTATCAGAGCTTGGTGGTCC
TGATTAAacgattcatttcgactgtgaaatgactgaattcatgatatgta
ccactggagagtcttctgagaacttttaaaattttccacccaatacatca
cttaaacaatagaaaaagtgacgtattgggtgaaaaaaaacaacagaaaa
atttcataatttcttgaagtcattgcattagtgcatatcatgaaatAGAT
CTCCTATAATTCTTTCTCCAGCCAACAAGCGAACAATAATCATCTGTATG
TTGGGTATTGTGCCAGTACAAGTCATTGGCTCAGTTCGCGCCAGTGAATT
CTTGTATGCAGCTCCTGGACATCCAGGCTTAGCAATAAGTGGATATCATT
TGAGAAGAGAAGATAAGAGAGAAGCCAACTTGGTTGGGATTGCTGTCAAT
TCTGTTTTGACCAAGAATGAATTGTCGGTaggtttgttttttgaaatacc
CTTTATATTGAGGCCTTTCAAaacagggcccacgccatgaaattgaaatg
aatatAGAGTTTAAGGAGAAgcaaccaaaaatttttactttgcaaaaaag
gcCCCGGTGCCGTGGGCCCTGCATGACGTTCTATTCtaactctagtttag
acggtcaACTTTTTGGTTTGCTTTCCTTTATATTTTAGTTCTTCTAGAGA
GTCGTtagttcccagctggcacacaacgttgtttcaacgttcatctaacg
ttatatggacgttgtgaacgttagataaacgttgaaaaaacgttgtgtgc
cagctgggttgagATACTTTCTTCAGACACTAAGccagaaaacaaaaaca
atctgAAACTTCCTATCGACTTTCTACTGTCTATTACATCGAACGAAGGC
AAGATAGTGGGTTTTGATTCTCAGGCAACAACTTTCATTTACTCTGTATT
ATGggtcaaatattttatcaaattgtTAATGAACCGCTCTAATAAATTTG
GTTCAACAAGAATTGAAGATCTTTACTTCACCTGCCTTCAAAATACCGTG
ACCACAATAATTAAGCTTTCCCCAAAATTTAACCTGTGGAGACGAACTAT
GTCCATCTTaccatacagttgacgctctctaattcgatcttcaaggggaa
ttggattttcatcgaatatgggagcgtcgtttataagagtttcttgttga
cggggactttaaatttcatcgaataagggagcctatcgaatagtaaaacg
tcgaattagagagcgtcaactgtatttgttTACTCTCTTTTTCAGGTTGG
TGTAGTTGAAGCAGGAGTATCATTAATGCAAGCAGCCTCGCAACATTTAG
TCAATGAAAAATTGAGAGAAATGGAGACTGGCTTGGAACACAAGATTTTA
ACTGTTAAGAAATCGGCAATTCGGTGGAGAAGGGGTAATTTAAGGGATAT
TCAtgtggtttgagattttttgtcTCATAAAAAACTTCTGCAGTCCTAGC
CAAATCCTCCAAACATTTTGGTCTGATTTATTTCCCAGTTTTCAAGTCAG
AGGAACTTGAAAATTAGACTTTGAAAAATAGTTAGACAAAATGATTTGGA
GGTTTTGCTATCCAAACATGAAAGAATATGTAGGCCAAAGATCTCAAACC
ATTTAATTACCCCTTCCCTTGACAGTTTGCAGAGAGATCTTACAATTGTG
ATACATATCATATCTTATATTAGTTTGAAAGCCAATTTAACTCACTAGCC
TTTTGATGTTCAATAATACCCAGCCTTCTTTGGACGAATTTTGGGTAATT
CTAGAGTTTTAACACATCATCAAATTATACTCGAACCTTTCAATCCCGGC
TGGCACAcaacaaaacgttgtttcaacgtttatataaTGGCTTGATAATG
Ctcataacgttagataaacttagaaaaaacgttgtgtgccagctgggatg
tttcttttttaataaaaattcagaattttaaCGCTTAAGGAGACGCTGAC
AAAACATCgaccccagggggggggtaacAGTTGAGAACTGACGGGggtgt
gccccccccccccgactaTTAgtactaatttgaccaaatttcgatgtttt
tagggacacaaaatttaaattttcatattttccgacccttattGAAACTG
AGATTTGAATTCCTCATTTTCCCAACAATTAGTGTGACTtaggaaatcca
aaaaaggtacccttaagggtggcacttACCTGTACCCTCCTATTCtaact
acccccccccccccccccgggaatttgGTCTCTTTAACGGTAGCTAATCT
CGTTCCAAAGAATATCCTGATATTGGAGGATTCCTCAAAGTTAAACTCGT
TTGGCCCTGGAActgaatttttcttttcgttcATTTTCAGTGTTCACTTG
GTTAGCTGTCATTTTTGTCATCTTCTTGATCTTGGCTAGTGCTTACGTCT
TCCAACTGTATTGGCCTGGATCTGCCTATCGCAAGTACAAATGCATGCTT
GGGCACAAGGAACCCCTCTACAAAGCTCAAGTCATTTATGTACCCTACGC
CAAGCAAGACATAGTAATAACATTGAGTTgaattatcatttttctttatc
attCTTCTAACTAACCACAATCGAATTCAGAACTGGTGTCTGATTCTTTG
AGTTTAAAATGCGATGGGCTAGAATGTTCTAACCTTTCTCAAAGCAAGTA
AAAGTGATACCTTTAAGATTTGTGCCGCATTtagaatgacagattgaatt
gAGCATCTTTCACGCGGCACATTTCCCGAAAAATgtcgatagattttact
ttcaattcaGTATTTGCTTGTAAAACGCTTATCAGGCTTTTCATGGTGGG
AAATAAGTAGTTTTATCTAAGGTTTTTTCGGGGATTTCAACTTGATGGTC
CAGTTACCCTTTTCTACTTTCAACACCCCCACCCCATCCTCGAGGCAGGA
AGTGGAAAACAGTTTTTAGTTGATAGATCGTGGGTTGAAGCcaaaaaaca
aactcaaaaagttacattttactAAAGTAGTACATTTTGCTAACAttttc
agatgagatggagtttttataagatactttaataattggtcatttgaagt
aataaaaatgacccgttctttagaaaaagttacaaatttgttttattact
ggttaacgaccaaccaaatcaaaaaagaaaaaaactctatCTCGTCCCAA
CATTTTACTGTATTTAGCTCATTACAACCAACGGCATCGAATTCGAATAT
GACGAACTCATAAAAAAGATAAGAGAGCACAAAGGGGCCACGTACCGACT
TCTTGCACCAATGGTTGGTGGTATCAAAATTGGAAGTAAGCATATTATCA
TGTTATCTTCTTTGAAATGTTATCAAAATATGACCCGTTTTTTATAAAGT
TAGTCATGTtcaaaaagcttaaattttattcgtaatatggggggggggct
gcTTCTGTTCGGAGATAAAACCAATtttaatagctcctgaaataatagag
cctTTATTTGGcataaattcctaacttttatttagcttcaaaaaaaaaca
aaaacatttgacaTCTAAAAGTTTTCACACCTTGACAATGATGACATTTC
CGACAGaataaggtgtcacaaaaattgacacatttttgatacaaatttat
tctttatgtcaaatatatcgtttaaaccgtaatttattggatatttagga
taaaaaaaTGTACATGCTGAAGATCTGAAACCCTCCGATTCTCTCTTGAA
AATGAATTAATCTTTCTCATCTTATTAGAACCCAGATTTTTTCTTGGCTT
TAATCGATGTGCGTATGGGAACAGTTTTGCATACGCTAAGATGGACGGGA
CAACAGTATACAGTGGTGTGATCATGTTTGCAGTTGATGAAACTTGTACT
TACGCATTCCTCTACAATGGAGTTTATGATACTTGGACACGATTTAACTC
TGCTGGAAATGTTGAATTTCCAGGTTCTGTCAGATGTGGTCAAAATGCGA
CACTTGACTTCCCAGAAGCCAATGGTAGACGGGATATTAAACTTGAAGCA
CAAGACCCCTGa Coding sequence (CDS) from alignment at sc0000094_pilon:1151316..1157627+ >XLOC_042393 ID=XLOC_042393|Name=XLOC_042393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000094_pilon:1151316..1157627+ (Clytia hemisphaerica_ch_hm2_pilon)
ACATCCAATGATCATTTTCAACGATACTTTCCGACGCATGCGCATAAAGA
AGAGATGGCAAACGAAAGAACCAAACAAACGGATTTCTTCTATCTCATTG
GAAGTGAGCAAACCAACGAATCCAAACGAGCTAGAACGACAGACATCCAA
TGATCATTTTCAACGATACTTTCCGACGCATGCGCATAAAGAAGAGATGG
CAAACGAAAGAACCAAACAAACGGATTTCTTCTATCTCATTGGAAGTGAG
CAAACCAACGAATCCAAACGAGCTAGAACGACAGCTTCGGTCAGCTCTGC
AGATTCAGCTTTGGGAACACCATCACCGTGGCTTCAATCACCCCAAGCAT
ATTCACCACCTTTGTCTTTGAATGCCGATATAGAAAGCCCACCAGTGCCA
CAGGAGGCGCAAGCACCATCGCAGAATGCAGCTTCGGTCAGCTCTGCAGA
TTCAGCTTTGGGAACACCATCACCGTGGCTTCAATCACCCCAAGCATATT
CACCACCTTTGTCTTTGAATGCCGATATAGAAAGCCCACCAGTGCCACAG
GAGGCGCAAGCACCATCGCAGAATGCAGGTGACGTTGCACATTTCTCGAA
CATCATTGCGGAACGTATTCAAACGGAAACGTTAGAAGTTGGTGAAATTA
AAGGGCAAGTCTTCACTACTCCTCATCACGACattggctaccattttgaa
ttgaatgatgatgaagaaaaattCAATGAAGGTGACGTTGCACATTTCTC
GAACATCATTGCGGAACGTATTCAAACGGAAACGTTAGAAGTTGGTGAAA
TTAAAGGGCAAGTCTTCACTACTCCTCATCACGACattggctaccatttt
gaattgaatgatgatgaagaaaaattCAATGAAGGGGAAGTTGTTGGTCT
GTTACCAGATGGTGACGACAAAGATAAAGGAACTCAACGTTTACGTGTTG
TGAAACTAACCAGTGAAACTGCAAGTCAATGTAATCTCAAAGGTGTTATC
ACCAATTCACCGTACATTGAAGCTTACTGCCCCAAGAAGGATtGGGAAGT
TGTTGGTCTGTTACCAGATGGTGACGACAAAGATAAAGGAACTCAACGTT
TACGTGTTGTGAAACTAACCAGTGAAACTGCAAGTCAATGTAATCTCAAA
GGTGTTATCACCAATTCACCGTACATTGAAGCTTACTGCCCCAAGAAGGA
TtCCAACAAGCGAACAATAATCATCTGTATGTTGGGTATTGTGCCAGTAC
AAGTCATTGGCTCAGTTCGCGCCAGTGAATTCTTGTATGCAGCTCCTGGA
CATCCAGGCTTAGCAATAAGTGGATATCATTTGAGAAGAGAAGATAAGAG
AGAAGCCAACTTGGTTGGGATTGCTGTCAATTCTGTTTTGACCAAGAATG
AATTGTCGCCAACAAGCGAACAATAATCATCTGTATGTTGGGTATTGTGC
CAGTACAAGTCATTGGCTCAGTTCGCGCCAGTGAATTCTTGTATGCAGCT
CCTGGACATCCAGGCTTAGCAATAAGTGGATATCATTTGAGAAGAGAAGA
TAAGAGAGAAGCCAACTTGGTTGGGATTGCTGTCAATTCTGTTTTGACCA
AGAATGAATTGTCGGTTGGTGTAGTTGAAGCAGGAGTATCATTAATGCAA
GCAGCCTCGCAACATTTAGTCAATGAAAAATTGAGAGAAATGGAGACTGG
CTTGGAACACAAGATTTTAACTGTTAAGAAATCGGCAATTCGGTGGAGAA
GGGGTTGGTGTAGTTGAAGCAGGAGTATCATTAATGCAAGCAGCCTCGCA
ACATTTAGTCAATGAAAAATTGAGAGAAATGGAGACTGGCTTGGAACACA
AGATTTTAACTGTTAAGAAATCGGCAATTCGGTGGAGAAGGGTGTTCACT
TGGTTAGCTGTCATTTTTGTCATCTTCTTGATCTTGGCTAGTGCTTACGT
CTTCCAACTGTATTGGCCTGGATCTGCCTATCGCAAGTACAAATGCATGC
TTGGGCACAAGGAACCCCTCTACAAAGCTCAAGTCATTTATGTACCCTAC
GCCAAGCAAGACATATGTTCACTTGGTTAGCTGTCATTTTTGTCATCTTC
TTGATCTTGGCTAGTGCTTACGTCTTCCAACTGTATTGGCCTGGATCTGC
CTATCGCAAGTACAAATGCATGCTTGGGCACAAGGAACCCCTCTACAAAG
CTCAAGTCATTTATGTACCCTACGCCAAGCAAGACATACTCATTACAACC
AACGGCATCGAATTCGAATATGACGAACTCATAAAAAAGATAAGAGAGCA
CAAAGGGGCCACGTACCGACTTCTTGCACCAATGGTTGGTGGTATCAAAA
TTGGAACTCATTACAACCAACGGCATCGAATTCGAATATGACGAACTCAT
AAAAAAGATAAGAGAGCACAAAGGGGCCACGTACCGACTTCTTGCACCAA
TGGTTGGTGGTATCAAAATTGGAAAACCCAGATTTTTTCTTGGCTTTAAT
CGATGTGCGTATGGGAACAGTTTTGCATACGCTAAGATGGACGGGACAAC
AGTATACAGTGGTGTGATCATGTTTGCAGTTGATGAAACTTGTACTTACG
CATTCCTCTACAATGGAGTTTATGATACTTGGACACGATTTAACTCTGCT
GGAAATGTTGAATTTCCAGGTTCTGTCAGATGTGGTCAAAATGCGACACT
TGACTTCCCAGAAGCCAATGGTAGACGGGATATTAAACTTGAAGCACAAG
ACCCCTGaAACCCAGATTTTTTCTTGGCTTTAATCGATGTGCGTATGGGA
ACAGTTTTGCATACGCTAAGATGGACGGGACAACAGTATACAGTGGTGTG
ATCATGTTTGCAGTTGATGAAACTTGTACTTACGCATTCCTCTACAATGG
AGTTTATGATACTTGGACACGATTTAACTCTGCTGGAAATGTTGAATTTC
CAGGTTCTGTCAGATGTGGTCAAAATGCGACACTTGACTTCCCAGAAGCC
AATGGTAGACGGGATATTAAACTTGAAGCACAAGACCCCTGa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1151316..1157627 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1240-1521:6031 |
| Aaloc | 1120-1236:5468 |
| Aaloc | 949-1119:4643 |
| Aaloc | 808-945:3546 |
| Aaloc | 604-807:2524 |
| Aaloc | 445-600:1714 |
| Aaloc | 292-441:810 |
| Aaloc | 145-288:355 |
| Aaloc | 1-141:1 |
|
