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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:152757..154361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042375 ID=XLOC_042375|Name=XLOC_042375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1605bp|location=Sequence derived from alignment at sc0000238_pilon:152757..154361+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATTATTTCTTTCAGATGTATGATAATGGCAATATTTGAGCTATC
ACAAAACTTAAAGTCCTTTCTCCACGAAAAACTTGATGTCAGTCTCTCAA
ATCTTGTAgataattttgttgaaattgatgtAATTGGAAATTCAGTTTGT
ATCAAGAATGGTGATGTTGTTGTATTTCATGCTGAACTCAATAATGATGC
TGCAATTGGGAATGTTGTGATCAATTTGAAAGCTGTAAACAGgggatttt
tttttatcattatcaGCAACAAGGGTTGCCATGTTATTAATATGTTGGAT
AAAAAGGTACATTTTTGGTACAATGGGTGTAGCGTTGTGGTAGATGATTA
CTTGCAGAGGGGACACGATCAAATCATTATTCATCTCAGAGATAATCATT
ACATTATTactgattttgattgttgttCACATGACACAAGACATATGTCC
AAAGATCGACACGAATCGTTTATGAAAAGTCAATCGCAAGGTTTTGCTAA
TCAAGCAGTTCTCAATTCACTTCATGATAAGATATCGAGAAGTCTTAATC
ATGGACAGATATTGAAATCTAACAACCGAGAGAAAGAAAACCTAATCAAA
CAATCTTGGAATGCCTTTAAAGATATATCACTGGATCAAAAGACTTCAAC
TCCAAAGTTAGCTTCCCTTGTTCCTCTTTGCAACAAAAATAGTGTCTCAC
ACCCACAGCATCACTCACTTGAGCCACATGAAAAGTCCTTGGAAACCTTC
AAAATGGTAAAGCACTGGATTCGAAAGCTTAGTGACGGTTTTATTTTTGG
TCTTGTGTTAAAGCATACATTTGAAATGGCCCTTTGCAACTGTTCCACGT
CACTCACTTTGAAAAACCAAACAACACATACTTTATCACTTTTGTCAAAT
AGGAAGTTTACAAGTGGAGGAGAGAGTTGGAAGTTGGAATCAGAAGAACT
GTTTTTAACGTCAGTCAATTTTCCTCTGCATGGAAGTCTGACATACTATG
ATTTTGATATAAGCATTCAATTTTGTCATGATGGAcaggagaaaaaattt
ttctgttaCTATGTTGATAGTATCAAACTTGACCGGTTAAAGGTTTTATC
GCTAGAATGTGTTTCTAACAAAGACTTTAATATGAGGGACGAAGAAGATA
AGTTGTGTTATGATttacttacttacaaaaaagaatttgttttgGAATCT
AGAATAACTCATTTCCACAGCATTTTAAATCAACTGTGTCTCAAATTTAA
TTGTACTCAAATGACAGTAAACAATTTAACAATACTGAGACTAAAACATA
TCCAAggtgaaatttattttcatggtGGCAAAGTTCCCACAACAGGAACT
ATATTTGCTTTATCAAGAGAAAATGTTGCACTGCTTTTCTCAGAACTGAA
GTCCATTCTTCCAGCCGACGTATCATTCAAGTTGCAAATATCACCACAAA
AGCTGAATGAAGCACGAAAAGTATTATTGGATGAAACTGAGTATCGTATG
AGatctaatgacgtcatcattctaGATTCACCTCCAGAACATCCAAACCA
AGCCTTGCTAAATAAGATTCTCAATACAGATCGCATAATGAGTCAGATTT
TTAGT Coding sequence (CDS) from alignment at sc0000238_pilon:152757..154361+ >XLOC_042375 ID=XLOC_042375|Name=XLOC_042375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3210bp|location=Sequence derived from alignment at sc0000238_pilon:152757..154361+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATTATTTCTTTCAGATGTATGATAATGGCAATATTTGAGCTATC
ACAAAACTTAAAGTCCTTTCTCCACGAAAAACTTGATGTCAGTCTCTCAA
ATCTTGTAgataattttgttgaaattgatgtAATTGGAAATTCAGTTTGT
ATCAAGAATGGTGATGTTGTTGTATTTCATGCTGAACTCAATAATGATGC
TGCAATTGGGAATGTTGTGATCAATTTGAAAGCTGTAAACAGgggatttt
tttttatcattatcaGCAACAAGGGTTGCCATGTTATTAATATGTTGGAT
AAAAAGGTACATTTTTGGTACAATGGGTGTAGCGTTGTGGTAGATGATTA
CTTGCAGAGGGGACACGATCAAATCATTATTCATCTCAGAGATAATCATT
ACATTATTactgattttgattgttgttCACATGACACAAGACATATGTCC
AAAGATCGACACGAATCGTTTATGAAAAGTCAATCGCAAGGTTTTGCTAA
TCAAGCAGTTCTCAATTCACTTCATGATAAGATATCGAGAAGTCTTAATC
ATGGACAGATATTGAAATCTAACAACCGAGAGAAAGAAAACCTAATCAAA
CAATCTTGGAATGCCTTTAAAGATATATCACTGGATCAAAAGACTTCAAC
TCCAAAGTTAGCTTCCCTTGTTCCTCTTTGCAACAAAAATAGTGTCTCAC
ACCCACAGCATCACTCACTTGAGCCACATGAAAAGTCCTTGGAAACCTTC
AAAATGGTAAAGCACTGGATTCGAAAGCTTAGTGACGGTTTTATTTTTGG
TCTTGTGTTAAAGCATACATTTGAAATGGCCCTTTGCAACTGTTCCACGT
CACTCACTTTGAAAAACCAAACAACACATACTTTATCACTTTTGTCAAAT
AGGAAGTTTACAAGTGGAGGAGAGAGTTGGAAGTTGGAATCAGAAGAACT
GTTTTTAACGTCAGTCAATTTTCCTCTGCATGGAAGTCTGACATACTATG
ATTTTGATATAAGCATTCAATTTTGTCATGATGGAcaggagaaaaaattt
ttctgttaCTATGTTGATAGTATCAAACTTGACCGGTTAAAGGTTTTATC
GCTAGAATGTGTTTCTAACAAAGACTTTAATATGAGGGACGAAGAAGATA
AGTTGTGTTATGATttacttacttacaaaaaagaatttgttttgGAATCT
AGAATAACTCATTTCCACAGCATTTTAAATCAACTGTGTCTCAAATTTAA
TTGTACTCAAATGACAGTAAACAATTTAACAATACTGAGACTAAAACATA
TCCAAggtgaaatttattttcatggtGGCAAAGTTCCCACAACAGGAACT
ATATTTGCTTTATCAAGAGAAAATGTTGCACTGCTTTTCTCAGAACTGAA
GTCCATTCTTCCAGCCGACGTATCATTCAAGTTGCAAATATCACCACAAA
AGCTGAATGAAGCACGAAAAGTATTATTGGATGAAACTGAGTATCGTATG
AGatctaatgacgtcatcattctaGATTCACCTCCAGAACATCCAAACCA
AGCCTTGCTAAATAAGATTCTCAATACAGATCGCATAATGAGTCAGATTT
TTAGTATGTTGATTATTTCTTTCAGATGTATGATAATGGCAATATTTGAG
CTATCACAAAACTTAAAGTCCTTTCTCCACGAAAAACTTGATGTCAGTCT
CTCAAATCTTGTAgataattttgttgaaattgatgtAATTGGAAATTCAG
TTTGTATCAAGAATGGTGATGTTGTTGTATTTCATGCTGAACTCAATAAT
GATGCTGCAATTGGGAATGTTGTGATCAATTTGAAAGCTGTAAACAGggg
atttttttttatcattatcaGCAACAAGGGTTGCCATGTTATTAATATGT
TGGATAAAAAGGTACATTTTTGGTACAATGGGTGTAGCGTTGTGGTAGAT
GATTACTTGCAGAGGGGACACGATCAAATCATTATTCATCTCAGAGATAA
TCATTACATTATTactgattttgattgttgttCACATGACACAAGACATA
TGTCCAAAGATCGACACGAATCGTTTATGAAAAGTCAATCGCAAGGTTTT
GCTAATCAAGCAGTTCTCAATTCACTTCATGATAAGATATCGAGAAGTCT
TAATCATGGACAGATATTGAAATCTAACAACCGAGAGAAAGAAAACCTAA
TCAAACAATCTTGGAATGCCTTTAAAGATATATCACTGGATCAAAAGACT
TCAACTCCAAAGTTAGCTTCCCTTGTTCCTCTTTGCAACAAAAATAGTGT
CTCACACCCACAGCATCACTCACTTGAGCCACATGAAAAGTCCTTGGAAA
CCTTCAAAATGGTAAAGCACTGGATTCGAAAGCTTAGTGACGGTTTTATT
TTTGGTCTTGTGTTAAAGCATACATTTGAAATGGCCCTTTGCAACTGTTC
CACGTCACTCACTTTGAAAAACCAAACAACACATACTTTATCACTTTTGT
CAAATAGGAAGTTTACAAGTGGAGGAGAGAGTTGGAAGTTGGAATCAGAA
GAACTGTTTTTAACGTCAGTCAATTTTCCTCTGCATGGAAGTCTGACATA
CTATGATTTTGATATAAGCATTCAATTTTGTCATGATGGAcaggagaaaa
aatttttctgttaCTATGTTGATAGTATCAAACTTGACCGGTTAAAGGTT
TTATCGCTAGAATGTGTTTCTAACAAAGACTTTAATATGAGGGACGAAGA
AGATAAGTTGTGTTATGATttacttacttacaaaaaagaatttgttttgG
AATCTAGAATAACTCATTTCCACAGCATTTTAAATCAACTGTGTCTCAAA
TTTAATTGTACTCAAATGACAGTAAACAATTTAACAATACTGAGACTAAA
ACATATCCAAggtgaaatttattttcatggtGGCAAAGTTCCCACAACAG
GAACTATATTTGCTTTATCAAGAGAAAATGTTGCACTGCTTTTCTCAGAA
CTGAAGTCCATTCTTCCAGCCGACGTATCATTCAAGTTGCAAATATCACC
ACAAAAGCTGAATGAAGCACGAAAAGTATTATTGGATGAAACTGAGTATC
GTATGAGatctaatgacgtcatcattctaGATTCACCTCCAGAACATCCA
AACCAAGCCTTGCTAAATAAGATTCTCAATACAGATCGCATAATGAGTCA
GATTTTTAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:152757..154361 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1605:1 |
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