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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:157579..165410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042363 ID=XLOC_042363|Name=XLOC_042363|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7832bp|location=Sequence derived from alignment at sc0000238_pilon:157579..165410+ (Clytia hemisphaerica_ch_hm2_pilon)
ttatttttagtaacaaaaaaatatattattgaaaaaatgttaGTGAGAAG
ATTTGTGAACCAAAAAGTATTTTTAGAaggtaatgtttttgttttatttt
atgatCTGTGAGGTTAGCATATATATATCGATTTTAATTATACAATTCTC
AATGTACCTTTAATTCTGTCACTATTCATTATTTCAATATAGTACTACGA
CCAGCTTCAAGTTTCAATTTGTCATGTCATCGAAAGTATTCCGTCAAGAA
AACACCTTCAGCTATCACTCTTATGGATCATCTAAAACAAAGGATCAAGG
TTTCTTTTCTTAACATGCACATAATTAGACAACTGTTTCAAGATTTATGG
TTTTCTTTAATGATTAGAGAgagatttttgattatttttggacCTGACTC
CGAAGACTTTCCTATAGAGAGTCCAAAAAGTTACCCTTAGAGAGTGAAAT
AAAACAGGCCTAGAACGacaattttcgaaagttttcttgtccctagagag
actttattatttacttttcatgattttcataCCTTTAAAAACCTAAATGA
GATCCAAATAGGGCAAAATCCTTAGAGGGACTTTTCTatactttttgttg
tttttgtataacCCTTTGTGGAGAAATTTGGGTAGGTCAAACCTAGCACC
TATTTATCGTATTGCAAAGTTACACTTAACCTTACCCATTTGTTGgttct
aaaaattattttttatattttcaggcAACTGGACCCATAACAGTAGCAAG
CTATATGAAAGAAGCCTTAACCAATCCAGTATgggtaagaaacattttca
CTCATGTAAACCCCTGGTGATTAAAATATCTTGAACTTTTAAAAAAGAAC
GTAAAAGTCAATGTTGATTTATCTTTTAAACATTGTAGTTGAACAGTAAA
AACATTGCTGTTTGCATGCCGTTTCAACGATTTTTGACGTTTCTTCATCA
CGGTTTGTCTTTATCAAATTCGCTGGCTTTACTTTTCAATCAATGACAAA
AATAATGTCTCTGAGATTTGTTACTGGTACTATGTCGGTACAAACTTCAG
TTTTTTATGTTCATTGTGAAGCtcctttcttcaaatttttgtaatatttt
gtgAACAGGGGTACTACATGAAGACAGATGTGTTTGGTAAAGAAGGTGAT
TTCACCACATCTCCAGAAATCAGTCAAATCTTCGGAGAGGTAAATATAGT
TAAACTCTTTTATCAGATGagatattttttctaaacatcTAGTTTTCTGT
AACATTGCTGACTTGTAGGATTAATTGTTACTTAGGGAAACATTTTATCA
GTATAAAAATCGAGGTTAAGATCTGTTTTATCCCATGCATTTTGTATAca
tggtcaaaatacaaaaacatgagTAGTCAATAAATTGGTCAGAAAGTACA
TTATAGCAAGGTAGTGGTGTGTCAATTTACCTAGCTAGAAACTGTAGATT
ATCcatgaaaattggcaaaaaactcgAACTTGtttttttGGACCAGGTTC
TTTATTTAGTGGTCAACAAaaggttttttgagattttcaaaaagaatgaa
atttctaaaatgcTATTTGTAGGTGTAGGCAATGACGAATACCGTATTCT
CGATTTACATCATTCCTTTTGTGAAACAATTTACACATTGTTATTTCTTC
AGTTGATAGCGATTTGGCTTGTTCTTCAATGGTCAGAAATGAACAAACCC
ACACCCTTTCAATTGGTGGAACTTGGTCCTGGCAGAGGAACTCTGATGTC
CGATATCGTAAGAGTAAGTGTCCGAATAATTTATTTCTCGATCATACTCT
TTCAAAATGAAGTCGGTACCTGTTGCTTATTAATTTCAATAAATATAAAC
CACTTTTACGGGGGTATGTTTTCTAACGAGGTGTGGTGGTCAGAACTGAT
TACAATACAATGCCTTAAAccatgggacaagctggagtttttacaagctc
ttacgtgatttggttggtcgttaagttaattcaattactttttctaaaga
acgcgtcatctctattacttcaaatgaccaattagtgaagtatcttataa
aaactccagctcatccctaaACCATATTCAGACGTTACGCTTCTGCATCA
CTCcggtttttatgttttttggtAAGAAGTGTTCATTTTGGTTTCGAAAc
atttcggagcaagaaaacgggaCATTTCCATTTACGTTTTGCTTTTTAAC
GTATTCCTTTCTAAGTTTCGAATATTGGTATTCCACAGTCGTTTCATTTC
GGAACGATGTGGACATAGACTTAAAGACTAAAAGCATGTCATAATTTTTG
ATACCAGTTAGCCGTAACggatttgaaattcttttgacagttgaataaaa
atatgtCGCCAGTATATAGTTATATAATCTGTGAAGTTCAATCAGCGTTT
TTCTGCTCATTTGTAACATTGCACGAAGTAGCTGGTAAACTTCAATTTTG
CAGAAAGAATAGGGGTAGAGTCTCATTCATCATTTGGTCGTTACTTTATT
CTATGGTTGAATAGGTTCAGGGCTGGCGTTTGTGGTCTTGTTTGCCAATT
GCCAATGAGTTCGTGACTGCAACCTTTTCTATAACAGAGAGGCTAAAATT
TCTTATGGAAATCTCGGCAGATaagaagaaaatagacttgGATAGTTTAA
AACGGATCTAAATTGTCCCTACAAATTACTGACACAAATTAGAAAGTTAG
AATGAAGATTccgatattttcttttttcgttcaaaaaagaaaatgagcaT
GTTTCCAAAACACCACATGACTCCGCATTGAAAATCTATATACAGTGCAT
TTGCATAAATGATTCAAATTCtaatcataaaataaaataaactagTGCAT
AAATTAATATGATATGTGGAGGAGATTGAACGATTGAATATCACTCTTCT
TGTCTTTGGTACCGTTACcgttaaatattttaaaacctaATTGTTAACTT
CCCTCCTGTTGATTGTTCCATGTACCTTTAGTTTGTACAAACTATCCTGC
TTGCTCCGTTATCAAAGTCGGCTGGGTTTCTCCAATATTCTTGCAAATTA
CTGCCCCCACAATTCGAAGGCGCGCCACAAAAAGTATTCTTAAGAGGGTT
TTCAGCGTTCGTTAGCCATACTCTTCCTAACAGATCGCATCAGTTTGTTC
AAGCCAGCACCAGCTAGCGTTCTGCCATCTGAATGATACAGCTTCGCTTC
TCTCTGGATAATATTCTGTTGGAAGACCACTCTTTGTAGACGAGCTTGAA
ACAATCCGCTAGCAAGCTGTGTGTTAAAATGAGAAGCGTTTCTATCCATG
GAGGCGTTATCGAGGCGTGGCAGAAGGGCGTACACAAAGACTTGGCCAGA
GATTCGTTTGAGTAGGTTACGAATACTATTGAGCATGACCAGAGCTAGTT
CTGAAGGTGATGCAGTTCTCTGTTCTAAGTTATTTGCTCCCACCAAGATG
CAAACGCTTGTGATGTCAGTGTTAGGGTTTTCGATGACGAAATCGGTCAA
CTTTTCGAATGCTGTTTCGATGGTGTAATGCGATTTGCAGAAACTCTCCA
CGCGTTTGGTGGTATCGGATACCAAGCGTTTTTGTGAGATCATATCAAGG
GTGCTGTCTCCTAACAGAACACAGACTTCTGGTCGAATCTCACTTTGGTG
GAGCTCTTCCAGCAGACTAGTTGTCGAGCCTCGACGTCTGACGGACGCTT
TAATTTTGCCATTTGTATTGAGCGAGGAGCTTGAATGACTTCTAGGGATG
GTcgctttctttgattttgcaGAGCTAGGCGCTGATCTCGCACTATTTGA
ATTGTAGCCTAGTTTCTTGGTTTGTTCGGCCATTGTGCTGTTGCGACGAG
CGATACGTGACGTCAGAGAACGCGACGTCAGCGGATCTTCGAAgttgatt
ttgataaaatctttgcaGAGTTTGATGTCATTTTTGACGACCATAATTTC
TTCATGTAAACGAATTTTCAACTGAAGAAGTTCGTCACTGATCTCCTTTC
CATGGTGGAAAGATTTCCAATCGTCTCGATAGTGACCGCTCGGCTTCATC
GCTTTCAAATTGTAAATCTTCTCCATGCTTTCGACCGTACGGTCTTGTAT
GGCCGCTTGATCATTATCACGGATAGTTTCCTCGATGGAGACATATCTTT
TCTTATCTGTCACCACGTACATGATATTCTCCATGATGTTTAAAACTTGA
GCGCGCTCTGTCATACTTAGTCGTGATTGGTCGAGATTGTTGCGCAGGTG
ACGTAAGAAGACATCCTTATGAAGCTTGGAATCCCAGGTGTGAAGCTGTC
GGCATAAGTCTAACGCCATGATGACCTGTTGGTTCTGATTctttgtcgcc
attttgattcgAAAGTGAGAGTTCTTTCACTGTTGAAATATAACAAGGAT
TCTTCTGCcagaaattgaacttttttggTTTCTGTGTTTCTTCTAGCTTA
GGGAGAAAACACCAAACCAAACGCTGTGCAGCAACACGACCTTCTTTGAA
GCTATCGCCTATCGAATGAAGAGTTGAAATTTTCTGACGAAGAATGAAGA
AGGAAAAAAGTATAAgtatattcttgatattttatttacaaGAACATGAA
ATTTAAGAATCGAAGTTTCAAAGTAGAATAGAATTGAGATCTTCGAAGGA
GTGCGGGTCTTGCTTTACTCTAAAGCACCGGTAAAACTGGTATATGAGGT
ACGACTGATTCATCAGGACCTCACTTTTCCTTTGTCCTGTCTGTTGTTGT
AGTAAAAATATTTGTGAAATTTCTCTTACCATGGATTgtgttattcttat
aaaaagaaagtgatGGTCATTTGGGAGGGACGTCAGTCATGGAATACTAA
AATAAACTTTCATTCAGCCCAACATCATCAATTTTAATCTCAATCAGTTA
AATACCTTTCATAAGGAAAATTCGCTGCATTCAATCAAACGTACattaaa
tattgatttttcttcgtgaaaacatttttcctttttcgctTAGCGATGAA
TGGTGTCCATGTAGAATTGTTTCGCCTTTTGTTTGCTCTCGTTTCGATTC
ACAACGTAAGTGTTCTTTCACCGACGTATTTACTATTGAAAGCCAATTAT
TTAGGACCGCTTTTAAGTGGTCACCATTTTGTAAGAAAGTCTAATTAAAG
AATGGAATTTAGGATCGAAAACCATTTTACTTCCCAAAGATTTCTCCATA
TAATATTCAGCTGTCACGAATATCGAATATCTGACCAGCAAGCAAGGTCC
CTTTCTATGAATCGTTTTGAACAACCTTTAATCAAAAGGTCCCACAGACA
GTCTGTGCCAccaactcgatcgggaagaacttactctaattttttctgct
cgtttgggaagattcttcctctttgggaagttgaaaattgactgaatctT
CGTCGAAGCTGTACTatgaccggcgaaagttgaaactttttggaaagaaa
agtagactttaccgtagaaatcttgttaaattatgaaaaaactgCGTATa
cttcccaaacgggaagttcCAACCCGATAGAGTTTTCCCGTTTCTTCCCG
ATCTGGAAGTCCGTTTTTTAACTCTTACCCGTTTGGATGTCAAGTTAATT
TCCTGTTCGagaaggttcttcccattttGGAAGAATcatcccgatcgagt
tagtggcacagactgacaGACAATTCATCCATCGAACCATTCGGCAAATT
TTCATTCACTAGAGAACGTTCCTTCCATAAAACGAGATGGCTTAAATTCT
AGGAGCCTGAGGATTCcattaccttaagagaagaaattttcgcgggaaca
aaATTTCGTGGTTTTCAcggattttgcctaaaactgcgaaattaagttcc
cgcgaaattttacaaaatcgtcaatccgcgaaattaaattcccgcgaaat
ttaatttatttcacgcattcccccaaattcgtactatttcaagccttaaa
acaggttttttgcttatttaataacgcttttgaccaaaaatatcctgcaa
ccgcgaaattaaattcccgcgaatttttcgaaaatcgatgaaccgcgaaa
ttaaattcccgcgaaaaaaaataatttggccaaccgcgaaattaaattcc
cgcgaaaatttcttcccttaaggtatattcTTACAGAATTTCTCGAAAAT
GTATCAACAGTTTATCAACCAAAGAAGGCTAAAATCTAAATTCCTATAAT
AGCCTGTTAGCTGCTGTTTCTAACTCTTCGACAATCTTCCTTTCTAAGAA
ACCTATTTTcgtatgtttttttcttcaaataaatCATGATGTCATCAACG
TTGCGGTAACTTTGTCAAGAGATACTAAATTTTAGCGGTGGAGGTGCCCG
AGCCTACCAATACAAAACTTTAGGAAAATTTCGAAGATCCGTAAAATCCC
AgccaaaaacagccaaaatcaggaaaatatattttttgtaggCTCAAGGT
AATGTTTGCCGTATCTGAGCCGAGATATGTTTATAAGTGCAATACTTAAC
ATGTAATGtattttgttctttcttttgtaccCAGGTCTTTCAGCAATTCA
AAGGAAACATCGATGACAAGTTCTCCATTCATTTTGTGGAAGTCAGTGAA
AAGATGAAACAAATGCAACGCCATAACCTCAAAGTCTCCGaaaaaaaGGT
TCGTTTATTTTCTGCTTTTCATACGTTATTGtttctatcaaaaaaattta
atactgttCCCTGTTATTTCTACAACTAGACTATGCTTCTTGCATCCACC
AACTGATTCGTTTACCTGTGGTTTTGGAGGgatctgcgattcagactaca
acTATACTCAATTTACATATAGGTCGAAACAATGATAATATTCTCGCGCA
TTTTGCTTTTGTCGTATTTAATACAGGATATGATTGAGAACACGAATATC
AAGGTGAACTGGCATTCCAAAATACAAGACGTCCCAAAAGGTATTTCTAA
ACAAAGTGTCTCTCGTCATGAAATCCTGCCTTGCTTAGAATTTGATTTCC
TTCCAATGATACCATTTCATAGCAGACTAGCAAAcactttttttctcatt
tcaggTTTATCATTGTACATAGCTCACGAATTTTTCGATGCTCTCCCCGT
TCATCTGTTCCAGGTTGGTTCCAGGTTTCAAAATGATATTTATGTGTTGA
GTATGatagcctcgttttcaaaattggtTAAATGTGAATAGGGGAAATAa
tactagtttgagtaaagaaaacgatttaagttaatttcatactcaaagtt
tcatacCATCCAGAATGGAAATTTTCAGTGAAATAAGAATcggggaaaaa
taaaaaataaaaataggggAAATAATAATTAAGGGGATTATTCAAAAGGG
AATTCTCGGATCAATAACGGAAGAACTGACaattttttcacagaaaaaaG
AGGGTCATTGGAGAGAAATTCTGGTCAATTTATCATCGTAAGAAATGTTT
ATTACCTCTTTGTCGCACAAGAAGATATATCTCAATAAAGAAAATTCTTG
TATACAATTCTTAAGTAAGGTAgatacaaaagttttttttttcacgtgAA
ATAGTTACAAGACCTTTGATATGGCTATGATCTCTGCATACAAAATTCAT
CCTGATTCTTGACATGAAATTGCTCTTTGAAGGAACTTTGATTTGGCCTA
GAtttttttGAATATGTTGTATAAATCTGTTCTAACAACGACATAAGATT
TCTCTTagtatgaaaattatttttctctttcgcCTAAGTTCACAACAAGT
TTTGGAGTTTGTGACAGCGCCAGGTGCAAGTCCTTTAGCGATGTCCATGA
ATCTTCCTGAAGATGTTGATCAATGTGAGATA Coding sequence (CDS) from alignment at sc0000238_pilon:157579..165410+ >XLOC_042363 ID=XLOC_042363|Name=XLOC_042363|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000238_pilon:157579..165410+ (Clytia hemisphaerica_ch_hm2_pilon)
ttatttttagtaacaaaaaaatatattattgaaaaaatgttaGTGAGAAG
ATTTGTGAACCAAAAAGTATTTTTAGAagttatttttagtaacaaaaaaa
tatattattgaaaaaatgttaGTGAGAAGATTTGTGAACCAAAAAGTATT
TTTAGAagTACTACGACCAGCTTCAAGTTTCAATTTGTCATGTCATCGAA
AGTATTCCGTCAAGAAAACACCTTCAGCTATCACTCTTATGGATCATCTA
AAACAAAGGATCAAGTACTACGACCAGCTTCAAGTTTCAATTTGTCATGT
CATCGAAAGTATTCCGTCAAGAAAACACCTTCAGCTATCACTCTTATGGA
TCATCTAAAACAAAGGATCAAGgcAACTGGACCCATAACAGTAGCAAGCT
ATATGAAAGAAGCCTTAACCAATCCAGTATgggcAACTGGACCCATAACA
GTAGCAAGCTATATGAAAGAAGCCTTAACCAATCCAGTATggGGGTACTA
CATGAAGACAGATGTGTTTGGTAAAGAAGGTGATTTCACCACATCTCCAG
AAATCAGTCAAATCTTCGGAGAGGGGTACTACATGAAGACAGATGTGTTT
GGTAAAGAAGGTGATTTCACCACATCTCCAGAAATCAGTCAAATCTTCGG
AGAGTTGATAGCGATTTGGCTTGTTCTTCAATGGTCAGAAATGAACAAAC
CCACACCCTTTCAATTGGTGGAACTTGGTCCTGGCAGAGGAACTCTGATG
TCCGATATCGTAAGATTGATAGCGATTTGGCTTGTTCTTCAATGGTCAGA
AATGAACAAACCCACACCCTTTCAATTGGTGGAACTTGGTCCTGGCAGAG
GAACTCTGATGTCCGATATCGTAAGAGTCTTTCAGCAATTCAAAGGAAAC
ATCGATGACAAGTTCTCCATTCATTTTGTGGAAGTCAGTGAAAAGATGAA
ACAAATGCAACGCCATAACCTCAAAGTCTCCGaaaaaaaGGTCTTTCAGC
AATTCAAAGGAAACATCGATGACAAGTTCTCCATTCATTTTGTGGAAGTC
AGTGAAAAGATGAAACAAATGCAACGCCATAACCTCAAAGTCTCCGaaaa
aaaGGATATGATTGAGAACACGAATATCAAGGTGAACTGGCATTCCAAAA
TACAAGACGTCCCAAAAGGATATGATTGAGAACACGAATATCAAGGTGAA
CTGGCATTCCAAAATACAAGACGTCCCAAAAGgTTTATCATTGTACATAG
CTCACGAATTTTTCGATGCTCTCCCCGTTCATCTGTTCCAGgTTTATCAT
TGTACATAGCTCACGAATTTTTCGATGCTCTCCCCGTTCATCTGTTCCAG
aaaaaaGAGGGTCATTGGAGAGAAATTCTGGTCAATTTATCATCaaaaaa
GAGGGTCATTGGAGAGAAATTCTGGTCAATTTATCATCTTCACAACAAGT
TTTGGAGTTTGTGACAGCGCCAGGTGCAAGTCCTTTAGCGATGTCCATGA
ATCTTCCTGAAGATGTTGATCAATGTGAGATATTCACAACAAGTTTTGGA
GTTTGTGACAGCGCCAGGTGCAAGTCCTTTAGCGATGTCCATGAATCTTC
CTGAAGATGTTGATCAATGTGAGATA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:157579..165410 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-810:7740 |
| Aaloc | 673-714:7394 |
| Aaloc | 616-672:7057 |
| Aaloc | 550-612:6877 |
| Aaloc | 436-549:6535 |
| Aaloc | 325-435:1653 |
| Aaloc | 244-324:1109 |
| Aaloc | 184-243:725 |
| Aaloc | 79-183:195 |
| Aaloc | 16-75:19 |
| Aaloc | 1-15:1 |
|
