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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000217_pilon:281185..288169+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042358 ID=XLOC_042358|Name=XLOC_042358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6985bp|location=Sequence derived from alignment at sc0000217_pilon:281185..288169+ (Clytia hemisphaerica_ch_hm2_pilon)
gccAACTTGGAAGAGTTGCAGTCAGTGGAAGCAAGACAATGCTCGAACCT
TGAAACACTACTCgaagaactgaaaaataaatgtgAAGAAAAACAAGACA
CGGTGGAAGAAATCAGgtttatttttaacaatttattagtacagcggagt
ctccataagccaataccgagtttatgcaTGTGTGTTTTTACGCGACGGCG
ACGGTAAGGTTCTTATTTGGCGCGTCGCCAGGGTTTTGAGTTTATACTAT
GGGCTTTATTTCTGAGAAAACGTTTCGTTCACGtttgaatttggaaaaat
tttaacttttttctgaattgttatacaccttttcgaccgtagctgctGAT
TGCTgcgtgggcatttttttgtccgttttaccaccctaaactcgatccaa
tcctgtctataggtgcaaaaaaagactgggacggttttagggtggtaaaa
cggaagaaaaaaatgcccacgcggcaattggcggctacggtcgaaaaggt
gtattacggGTCATCCCTCCCATCCCCCTAGTGGACACAAAACTGGACTA
ATTGAATTATTCTGTGTTCTTCTTTAGCTCAGCCTTCATAAAATTCAAAT
ATGACACAGCAAAAGAATCAATCAGTACAAGAACTGGAAAACCCATTCCA
GTCAAAGTTAGTTGGcactgttttttgtttttgttttttttgcagttttt
ctgtttttatttcttcagcTGTAAGGATTGAATTAGATGTTCAAAGCACC
CTCAAAAGCCTTAGCTTTGGCTTGAGAACTAAGATAtagcttcttttttt
atttataagaaaagtgttttttttttcgccgAGGGTGAagtattcttaac
atattcttatttttcaaaatatttttcacagaGAAAACACTAGAAAAGGA
ATCCTCGATAACTACATATTGTTGTTGAGATTGTGAGAGAAAATACTAGA
ATCTGATTGGATGCGATAAAACGAGCAACAACGAAGAGTAGTTTGCAATC
AGGCGTTTGTTTAAATGTAGTGAAAACTTGTTGTGCGGTGGTTATACACG
CCTGACACTCTAGCTAGAGAAAATCCAGAATCCATAATGTTGAACATTTC
GTGGTACATGTTTTGAATCTACTTTTTCAGGATTTGGAGCAATACCAAAT
GGCCGAACAGAAAAAGGAGAACGAAGTCATCGCTGTAAGAATTAGGtttt
ttttctcgtttattaaaggttttattttttaataagagtgataccgtttg
cttactcatcaattttaatttacaagctttttcacattgaattgacacgg
atgtgaagcaagattggtcaggaaGAGGAAGGAGGCGATCGAAAAAATAt
atgcaatctgattggttaaaaagagtacaatatagcttgtattttacatg
tacaaaatataaattgacaaaaagatgttgttgcattgtagcggtagaat
caatctaacgtcactttgctacaaaagtgccctgcgcttttttccaacac
aaaaagtattttttgggtcaccgataaaccagttatcggAAAGTTGTgag
tacaatatggaaatatttcactcgtcccggattttccgtatattttcctc
gcctaaaaggctcggaaaatattgcacggaaaaatctcggaactcgttaA
ATATTTCTCATACTGTACTCACAACtttccgataactattacatatcaac
acaatataacaataggcagacactgtcctgatatgaaacatgtgtctgat
ttgaaatgggaacacttatgcaaaaataaaacttttaacaaagtattttt
ttcatattttttagaaCTTTGAAAGTTTTCATGTGAACAATCATTTACTA
CATACAAAATGATTTAACTTgttgaaaacaaaattcaaatttttaactct
tttgCTTTGCTGCTGTCAGGGGCCGCGACTCCACTTTAAAAGTGGTGGGT
CATGGTTTAATGTCTAAGGAGGTGGCACCATGGTTgccgccgacgggaga
aatttttgaaaattggccCTTCTAGACTGCTTAAGACAGGTCTTTTTCGA
GGTTTTTACTCAGAATTTAACTGAatcagtaatttttttttttgttttga
aaaaatgtggtcgggcCAAGGCCCGGGTGccccccccccACGCTGCCCCG
CGGCCCCTGGCTGTCTTTGTAAAACTTGTATCCCAATTTGCAAAATAGTA
CTTAATCATAAAAAGTTGATTACTGCAACGACGTAGAAATAAATCATATA
TACTAAAAACAGAAATTTGCAATAGAAACTTTGAAATAgacagggatttt
tctaagcactttgagctgggGGCCGTTTTTGTAAACTTAGTAGATCgaat
ttctaatatgtctgaaagGGAAATTGCTTAGCAAAGCTGTGCATTGATAA
AACTGTGGGTCTTGTGGGTGTTCAGAGGGCGAAGCTCTCAAAAACTCTTG
AATATAATATGTAGAtactaattagttttttttgctcataaacaagaaaa
aaggttaatttcgctagaaaaaatctcatttattTCGGATTGggtttcaa
aaactcaaaaatttattgAGTATTGAAGTATTGAAGATTGAGTATTTTGG
GGCGGTATACGGACATAAagaaagtgcttagaaaaatccctatTACCCTA
GTAATAATATAATTCacttaaaatttgtttttacaaGGTTCGTTTGGAGA
ATATCAAATTGAAAAACCGACTGAAGAAACGGGAACAACAGCTCAAAGCT
AAGGTAACGAAAGTTTCATAAAGAACAATACTCTGCTACGTGCCCTTTAT
ATTTCTATGAGTCCTTTTGATTAGTCAGGCGAGACGGGATTTCAATCATG
CGGTTTATGCAAATTACTGTTTTCCTAAATATCTCTGATTGCTTATAAAG
ATTTGGCTTTgaagttaaaaaatatataaacaacaataaaagaaaaacat
cgagagaagagaaaaatataaaactttcagtgtaatttactttgctaact
gggaaaaagtagtgaaacccatattgtgcgattagctcgtaatcacataa
tgaCTCGTACAAtacgaaaattgcactcgtgatttttttgcttcGAATTT
TCAttgtcctttcggactcggaaaattaacaacaaaaaaacactcGCGTA
ATTAATCTCGAGTTGCACTCGTATCACAAGTACATTAGTACGTTACATGT
ACTAATCCTCAACCATATGACTATTGCCCAAAGCAAAATAGAAACTCTCA
GAATAAACGAGTATTTACGAATTCAGCGGTAAAGGTAAGTAGCATTTTGT
AGTCCCCTTAAAAAATTGTTAGtgatattgttttttttgataCAATATTA
CTCTTATGAATATATTTTCAGGAAGAACTTGCAGAAGGTTTACACTTGAT
TGATTTTGaacaattgaaaattgaaaatcaaacatATAATGAGAAGATTG
AAGAACGTAACGAGGTAATACCATCTATCAACCTTTAGACCATATTCAGA
CGTTATGGTTTTGTATCGCTCCGGCATAGTTTCGTTACGGATTTAACACA
GTGTTTTGGAACGTTTCGTTTTGGAGAGATACGAAACCGTGACGTTCGAA
CATGGTCTAAAAGCGTGAAGAGGCTGGGTTTACCAGGCGAAGGAAGGATG
TCAAAATGTCTGAGAACGTTGCATTGATATTCTCATGGACAATTATTCAG
TGGTtcagtggcttccaggctatattctcagtcttattataacatttttt
agcgTTCCTGAGATCCTAAGATAATCTAAAGTCTCATGTTAAGACTCAGA
GTAAAACATTATGTTCCAgccgtactttaaagcacttaaaatcACTGACG
GTTTTGAGGTTACTCCCCGTAAGTGCCAAATATTATGGCGGTGATTGTAG
CCCTGGTAACGAAAACCCCTTTTCTCAATCTGATCTTTCCGATTTTTCTG
ATAGGGAAGGCTTTAGCAACGGGTTTGATCACCAGGGAGACATAAGACAG
ATTTTTGTTCTCGTTTTCTGATAGGTTTAGAAATTGCGATATTGTTTTAC
ACGTAATGACTAGGAATACTGTATACTGTGGATGTCAAAAGACaaagttg
aaagtgtttgtGTCACTTCATAACGTTATGAGAAGGGGTGTGTGGGTGTA
ATCTGGATTTCTTGCCAAAAGTATAGCACTAAAGAATGAGAgccaatttt
ttattgtttacgaGTTTACAAGATTCAACTGACACTTGACTTTTATCATA
ACCCTCTATTACctaggcacgacggaagctttttatatttaGTACgacga
atgaggaaatttaagcgattttatagcgattttcccgacgaagaggaaaa
tttcggttattttgtaaaaatctagTATGGCGGCCGCAGTAcatgccgta
cccgttgcgtcgtgtcTCTTACCCAGTTCCCTTGTGGTTTTTGAGTTGAG
AGGAATTCATTATTTCTTTGTTAGGAATTACTGAAACTTCGGAAGAAGAT
AAATTCAACAGTACAAGTATTGAcacatttaaaagaaaaactccaACATG
TTCAGGTTAGAATTGCGCTAGCCTCATTATCCTATACGATtattacaatc
atggtcgaaatatattgagaattgtGTATTTGtgtatttcaacttttcaa
gTGGCTTATTCTTAGCcctattggaacattttttgagctttttgatCTTG
TAaatcttaagtctcatgttagaATTCAGAGTTAAAGCTCCGCTTTCCAC
CCGTACTACACATTAAAATCATTCccggttttaaaattttattttgactt
aaTTCCCCTCATGTGAAAATATAATGACGCCCATCACTAGTACTAAAATT
CAGCAAAGTTGACGTGTTTACAGTATTTCCCATCTACAGTAATTCATTGC
ACTCAATCGaatctgtttttgttttgtatccAGGGAGAAAACGGTGAACA
ACGAACGAATTTACGTGATATTGAGGTCACTGTAGCTCATGTAAGTACGA
aagtctgtctgtctgtctgtctgtctgtctgtctgtctgtctatctATTT
CTCTGACCATGTTTTTCACagcttcaaaagttttaaggtcttcggccgct
aaatcgtaaaaatatgtaaaatcaggtctgcgtccgctaacagaaaaaat
atttgtggGGGCCCTCTTGAAACAGATAGGAATACAAATCCACTCCCAAT
TTACTCTGTCTAATGAGATCTCTGGCTCGTGAGCTGGGCGGTAGAGAAGG
GAGTATGACAAAGTAAGTAATTTTGAGATCGCAGTCGAGggcaacccgaa
ggctcctcttccTTTAActgtctacccaaaggtaggggagggtgccacaT
GAGCACTTTTGGAAGTCATAATTACTCGAGCTTGGAGGTCGTacccacaa
ccttgtgcaccgtagctAGATGCTCTACCTTCGTGCTATGGCCGCTTACG
AAAAAACATAGCAAAAAGCGGGTAATTGAATAATGGATCCCTGGTTTGTG
ATCTTCCTCGAACGTTTTAGACCATTTTTAGACGTTAGTGTTTCATATCG
CTTCAGTATGATATTTGTTATGAATAGGAACAGTTCATATTGATTTCGAA
ACGTTTCGGAGTAAGAAAACGGAGGAGTTCCGTTCctatgaaaatagtgg
agcgaaacctTTTCGATCCATTTTGCTTTGTATCGTCTCCTTCTTTGACA
ATTCGAGTTTCACAcagtgtttcggaaccgttttgtTTCACGGCGATACA
AAACCGTAACTGAATATTGTCTTAATCTATTTTCAAtatgtttcattttg
ttttttacagaAACGTGACCTGTTGACACGCTTGAAACAAGCACGTGACT
CCCTTCGCTTTGATAACACCAAGTTGAAGCATAAAGCTGGTCTCCTTGGA
AACAAACCGTTGTTAAGGGATTTCGAGGAACGAAAAGATGAGGTGTGTCc
acgttttgaaaattttttcaacaatcacacttttaacctttttttaattt
atacatTTGGAGTCTCTATAATTCGTACGCACAGGAGGAGCCCAAacttt
gttcgagttaaggaaatttcgagttatgaagtaaggtttACGATGaattt
ttaactgaagggaccagaaaacttaTTTATTACTTATTTGAGATACAAAT
ATGATGGTCCTATGGTTATTATTCAATTCGTATTTACCTGGGACCAAATC
TTCGTACGGGATTTTGACTGGTTGGTGTATACACTTATCAACCCTTAGGA
ACGTGATCGGCTTTTTATTAGGGGACTATGAATTTACAAGGCACAATTGT
TTTCAGCGCAAggcatttttaggcttacaaCTAAATCAAAGCAAGTAAGT
TCCCGCCAAAGCTCTAGAGACATTTTCCCTGCGGTAGAGTGAAATCTATG
TTTAGCACTTGAATAACTTGAACTATATTGACGTTACTTTTTCACTGGGT
ATCTTACATTGTTCTTAACCCTTACACTacgagggacgcgtatatgtgtc
caaaacaagccaaaatactgagtctcagacttgaggccatagctcctgac
cacttgatttaaaggggtataaaccgaatgcttttagaaagagtataaaa
atagctttccaatggtatCAAAAccatcttcaaaatcaaaagttacaagc
ttttatggcactctaaagttttgagtttaaaaaaaaaagtttagaaaaat
ttcaactttttcaaaaaaacagcgCGCACAAAGGGTTAAGAGCACTACAC
TTGTGTTTACGTTATCTTCATCGAGAAGAATTTTACTTGAACTTTCGTTA
CCAGTTTCTTCAAAAGCAGTAAGGGTTGAAAGGTGTAGTGAATAGCTTGT
TATCACTTTCTTTTTCAGAGTGAGGAATTGAGGAACCGGCTGGCAAATTT
GAGACAGAATCACATGGAGTTGAACATTAACTTGACCACTAtcagaaaga
aaattgataatgtCAAAACTATTGATATGCAGTAG Coding sequence (CDS) from alignment at sc0000217_pilon:281185..288169+ >XLOC_042358 ID=XLOC_042358|Name=XLOC_042358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1590bp|location=Sequence derived from alignment at sc0000217_pilon:281185..288169+ (Clytia hemisphaerica_ch_hm2_pilon)
gccAACTTGGAAGAGTTGCAGTCAGTGGAAGCAAGACAATGCTCGAACCT
TGAAACACTACTCgaagaactgaaaaataaatgtgAAGAAAAACAAGACA
CGGTGGAAGAAATCAGgccAACTTGGAAGAGTTGCAGTCAGTGGAAGCAA
GACAATGCTCGAACCTTGAAACACTACTCgaagaactgaaaaataaatgt
gAAGAAAAACAAGACACGGTGGAAGAAATCAGCTCAGCCTTCATAAAATT
CAAATATGACACAGCAAAAGAATCAATCAGTACAAGAACTGGAAAACCCA
TTCCAGTCAAACTCAGCCTTCATAAAATTCAAATATGACACAGCAAAAGA
ATCAATCAGTACAAGAACTGGAAAACCCATTCCAGTCAAAGATTTGGAGC
AATACCAAATGGCCGAACAGAAAAAGGAGAACGAAGTCATCGCTGATTTG
GAGCAATACCAAATGGCCGAACAGAAAAAGGAGAACGAAGTCATCGCTGT
TCGTTTGGAGAATATCAAATTGAAAAACCGACTGAAGAAACGGGAACAAC
AGCTCAAAGCTAAGGTTCGTTTGGAGAATATCAAATTGAAAAACCGACTG
AAGAAACGGGAACAACAGCTCAAAGCTAAGGAAGAACTTGCAGAAGGTTT
ACACTTGATTGATTTTGaacaattgaaaattgaaaatcaaacatATAATG
AGAAGATTGAAGAACGTAACGAGGAAGAACTTGCAGAAGGTTTACACTTG
ATTGATTTTGaacaattgaaaattgaaaatcaaacatATAATGAGAAGAT
TGAAGAACGTAACGAGGAATTACTGAAACTTCGGAAGAAGATAAATTCAA
CAGTACAAGTATTGAcacatttaaaagaaaaactccaACATGTTCAGGAA
TTACTGAAACTTCGGAAGAAGATAAATTCAACAGTACAAGTATTGAcaca
tttaaaagaaaaactccaACATGTTCAGGGAGAAAACGGTGAACAACGAA
CGAATTTACGTGATATTGAGGTCACTGTAGCTCATGGAGAAAACGGTGAA
CAACGAACGAATTTACGTGATATTGAGGTCACTGTAGCTCATaAACGTGA
CCTGTTGACACGCTTGAAACAAGCACGTGACTCCCTTCGCTTTGATAACA
CCAAGTTGAAGCATAAAGCTGGTCTCCTTGGAAACAAACCGTTGTTAAGG
GATTTCGAGGAACGAAAAGATGAGaAACGTGACCTGTTGACACGCTTGAA
ACAAGCACGTGACTCCCTTCGCTTTGATAACACCAAGTTGAAGCATAAAG
CTGGTCTCCTTGGAAACAAACCGTTGTTAAGGGATTTCGAGGAACGAAAA
GATGAGAGTGAGGAATTGAGGAACCGGCTGGCAAATTTGAGACAGAATCA
CATGGAGTTGAACATTAACTTGACCACTAtcagaaagaaaattgataatg
tCAAAACTATTGATATGCAGTAGAGTGAGGAATTGAGGAACCGGCTGGCA
AATTTGAGACAGAATCACATGGAGTTGAACATTAACTTGACCACTAtcag
aaagaaaattgataatgtCAAAACTATTGATATGCAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217_pilon | genome | sc0000217_pilon:281185..288169 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-798:6869 |
| Aaloc | 550-681:5811 |
| Aaloc | 493-549:4934 |
| Aaloc | 412-492:4475 |
| Aaloc | 319-411:3372 |
| Aaloc | 253-318:2688 |
| Aaloc | 199-252:1131 |
| Aaloc | 121-198:579 |
| Aaloc | 4-117:1 |
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