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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:217855..219529- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042347 ID=XLOC_042347|Name=XLOC_042347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1675bp|location=Sequence derived from alignment at sc0000238_pilon:217855..219529- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTGGATGATAACTGGATTTGTCTTCAAAGGTAAGAATCCAAAATT
CGGGTGTTTTACTATCAGTTTTCTCTTTATATAGAATGTGTAGCCTGGAT
GTGAATCTATTGTCCAACTGACTAGGATTTTCTTTAAGTTTATTCACTTC
GAGGCCAAGCAAAACCAAACATAATTTCTGAGTCCTGACTTTGCTCAGGG
TCAGGGGGTTTCAAATTATGAATACTAGACAACATCATAAAATGACGTCA
CAGTATCTCTCTAAATATTAAAATATTTGACGTCAATTATTTGTCGTTCA
AAATAATCTCTCATTTTGAAATCGACTAGTGGTCTAGTCGATTGTCCTGT
CAGTAGAATAGTATTTAATAGTAATAATTTTGCAATTTCTTTGAAAATGG
AATGGTCTGATCAAGTTCAACGTTTTCAGTGCCATTCATTGAATAAAAAT
TCATTTTCTTCATCTGTTTGGATTCTGTACGAAGATGCAGGAAGAAGATA
TTCAAGAAGGTCAGCTTTTGGACATTGTGTCTTTATTGCTGACCAAGTCT
TCAAAAATACTTCCAACCAACAACGTCATGTCTTTGGAGGTGACACAACA
CGTGGATCAACGAGTTCCTTCAAAGCATTGGCAAACAAGAACAAATTTGG
GTTTATTTCTGATGAATCTTCCGTTTCCTTCAGGAACCGCTCATTGATTA
CAGCTGCATGCGGGGAAAGCATCGTTCCATCATTGCCACTACACGAAAGG
CGATACAGTCAACCTTCAGACGGAATTGATGAGTTGACTTCCGCCTTTCA
ACGTCTTTCAGTAAACGGCTCCCCGCCCATTGATCCGCCCACAGCACCCA
TCGTGCAAACAGCAGCACCCATTGATCCGCCCACAGCACCCATCGTGCAA
GCAGCAGCACCCATTGAGCCGCCCGCAGCACTTATCGCGCAATCCACAAC
ACCAGTTGAAAATTCATTAACAGCTAATGAGATAACCACAGCATTCTCTT
CAACTATAAGCGACCACACTACCACAATCACCACCGGACACGCTTTACCC
GACTTCGAATCCACCGACCTCATTGATGCTCTTGAACAGGAATCAGCTGA
AGCGATGGGCGGCACCCACGGTGGCGGTCAACCTCTAGTGGCGGGTGCAA
TCACAAATGGGTTCTCCTCTAATGAGGAGTACTATCAATTTCTTCAGCTC
ATGCTGACTGCTGTCAATCAGGTGAGACATCCATTACAACAGTTGAAATT
TCCTTTAAAAGTCCTCTGGATTCAACCTGGAAAACGTGCAGCGTTTTTGA
CATTCCGTGTTTTTTTATATTTAGATACCGGCAGGTGCTCAAAATTGAGG
GAAACTCAATTATAAATCTTTTTCGACAAAATACTCCCGAAAATATCTTT
TTTAACCCGATTCTTTTCCCATATTTTCTCTTGTAGGGTATTGAATTTAA
TCCTGTTTAAAATGATTCATTTTTCAGCTGCAACAAGAACTCTTGATGGA
AGAGCGTGCTGAACAGGCTGCAAGAGACGCACGGGCCGCACGGGCTCTTC
GTGATCTTGCTGCGAACGAAAACCGCGCTCAACCCATTCGACACGCTCGA
CGAAGAAGACGTCGCGAAGAAATGGAGGGCCTCGAGAATGATCCTAACGC
CGCTAAACGGCGCCGAAGACTTTAA Coding sequence (CDS) from alignment at sc0000238_pilon:217855..219529- >XLOC_042347 ID=XLOC_042347|Name=XLOC_042347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000238_pilon:217855..219529- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTGGATGATAACTGGATTTGTCTTCAAAGATGTTGTGGATGATAA
CTGGATTTGTCTTCAAAGATGCAGGAAGAAGATATTCAAGAAGGTCAGCT
TTTGGACATTGTGTCTTTATTGCTGACCAAGTCTTCAAAAATACTTCCAA
CCAACAACGTCATGTCTTTGGAGGTGACACAACACGTGGATCAACGAGTT
CCTTCAAAGCATTGGCAAACAAGAACAAATTTGGGTTTATTTCTGATGAA
TCTTCCGTTTCCTTCAGGAACCGCTCATTGATTACAGCTGCATGCGGGGA
AAGCATCGTTCCATCATTGCCACTACACGAAAGGCGATACAGTCAACCTT
CAGACGGAATTGATGAGTTGACTTCCGCCTTTCAACGTCTTTCAGTAAAC
GGCTCCCCGCCCATTGATCCGCCCACAGCACCCATCGTGCAAACAGCAGC
ACCCATTGATCCGCCCACAGCACCCATCGTGCAAGCAGCAGCACCCATTG
AGCCGCCCGCAGCACTTATCGCGCAATCCACAACACCAGTTGAAAATTCA
TTAACAGCTAATGAGATAACCACAGCATTCTCTTCAACTATAAGCGACCA
CACTACCACAATCACCACCGGACACGCTTTACCCGACTTCGAATCCACCG
ACCTCATTGATGCTCTTGAACAGGAATCAGCTGAAGCGATGGGCGGCACC
CACGGTGGCGGTCAACCTCTAGTGGCGGGTGCAATCACAAATGGGTTCTC
CTCTAATGAGGAGTACTATCAATTTCTTCAGCTCATGCTGACTGCTGTCA
ATCAGATGCAGGAAGAAGATATTCAAGAAGGTCAGCTTTTGGACATTGTG
TCTTTATTGCTGACCAAGTCTTCAAAAATACTTCCAACCAACAACGTCAT
GTCTTTGGAGGTGACACAACACGTGGATCAACGAGTTCCTTCAAAGCATT
GGCAAACAAGAACAAATTTGGGTTTATTTCTGATGAATCTTCCGTTTCCT
TCAGGAACCGCTCATTGATTACAGCTGCATGCGGGGAAAGCATCGTTCCA
TCATTGCCACTACACGAAAGGCGATACAGTCAACCTTCAGACGGAATTGA
TGAGTTGACTTCCGCCTTTCAACGTCTTTCAGTAAACGGCTCCCCGCCCA
TTGATCCGCCCACAGCACCCATCGTGCAAACAGCAGCACCCATTGATCCG
CCCACAGCACCCATCGTGCAAGCAGCAGCACCCATTGAGCCGCCCGCAGC
ACTTATCGCGCAATCCACAACACCAGTTGAAAATTCATTAACAGCTAATG
AGATAACCACAGCATTCTCTTCAACTATAAGCGACCACACTACCACAATC
ACCACCGGACACGCTTTACCCGACTTCGAATCCACCGACCTCATTGATGC
TCTTGAACAGGAATCAGCTGAAGCGATGGGCGGCACCCACGGTGGCGGTC
AACCTCTAGTGGCGGGTGCAATCACAAATGGGTTCTCCTCTAATGAGGAG
TACTATCAATTTCTTCAGCTCATGCTGACTGCTGTCAATCAGCTGCAACA
AGAACTCTTGATGGAAGAGCGTGCTGAACAGGCTGCAAGAGACGCACGGG
CCGCACGGGCTCTTCGTGATCTTGCTGCGAACGAAAACCGCGCTCAACCC
ATTCGACACGCTCGACGAAGAAGACGTCGCGAAGAAATGGAGGGCCTCGA
GAATGATCCTAACGCCGCTAAACGGCGCCGAAGACTTTAACTGCAACAAG
AACTCTTGATGGAAGAGCGTGCTGAACAGGCTGCAAGAGACGCACGGGCC
GCACGGGCTCTTCGTGATCTTGCTGCGAACGAAAACCGCGCTCAACCCAT
TCGACACGCTCGACGAAGAAGACGTCGCGAAGAAATGGAGGGCCTCGAGA
ATGATCCTAACGCCGCTAAACGGCGCCGAAGACTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:217855..219529 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-969:199 |
| Aaloc | 37-771:1190 |
| Aaloc | 1-33:1676 |
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