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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:305532..311162- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042334 ID=XLOC_042334|Name=XLOC_042334|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5631bp|location=Sequence derived from alignment at sc0000144_pilon:305532..311162- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTATTTTTCAATTAAGAAGAATTGGTCTTCCTCCATCAGTTGAAGA
TGCTAGAAGTACATACACGTGAGTACTGTCTTCTCCCATTTTATTGAAAT
ATTTGGTACTCTTTTTGTCTTTCTAAACTATCTCTTTTTAAATAGAAATT
AAAGCTATGGCTGTCCACTGAAAAAATACCTGTTTACTAAAAATAAATTC
TGCTCTTTTGCAAATTAAACAATAGATTTTGAACTCCAAACATATTTCTA
TATTTAGATTCATTTTTGCTTCAAAGCAATGTGTGAAGAACTTCAGTGGT
CTACCAGGTCAGATAGCTAAGTCTCTGTAATGCTGTACTTGATCTTTCAG
AATAAAAGGAGATTCTTACATTGGACGTGGTAAAGATGTTGATATCTTTC
TTGATTCAAACATCCGAAAAGGATTGATTTCCAGAGCACATTCACACATC
TTAAAGCAATCCTCTGAAGATGGAAATGATATTTACTCTTTACATGATAC
AAGTTTGAATGGAACTTATGTGAACGATACTCGAATCAAAGGACCACAAG
TGCTGAAAGATGGCGATCGAGTTGTATTTGGACATTTGAGAGGTGCAATT
ATTGACCCAGGTGAATATGCACCACAAAATGAAACTGAATTTCTTTTCTT
GGTAAGTTTAATCAAATGAGGTTTTTATAGTAGATGATTTTGATTTTCCT
GCAGTATTTCCAGAATACTATCACTGCAAGAAAATTCGGGCCCATGTCTA
TTGTCATTTTAGAAATTTTTTCATTTCAAATTTGGGTTTTTGCCTGAAAA
ATGGCTCTTAGCAGGGATTTTATTTCCATAATGGCAGACATAGACGCATC
CCAGACCCAAATTATTTTGATTTCCCTGGAGTATCTCCAGAATACTATCA
CTGCATAAAAAAATTCAGTCAGCATTTAAACTCAGTTTGTAGAAGCTTGC
CTTAAAAAATGCTATTTTTTAATAATTATGATTTTTTTTTGCTAAAAAGC
GATTTTTGAAGACGCCATTATGAATTTTTGAAAAAAGTGAAAAACTTGAA
ATTCATTTTGCTTAAAGACTTTATTGAAGACTTCCATCTCTAAAAATTTC
AGACATGTGATTTAATCAGTTTAAAGTTTATGAACTTGCAAAATTGGCCT
TAAAAAGCATTTTGCTACCCAAAATTGGCTTAAAACGGCTCGTTTAGGGC
TCCAATGGGCACAATTATCAACCCAATATGATTATTTTGTTGTTTCTTCA
TAAAATTTAGTACAGGAAATGAAAAAAATAAGATTTGCAATAGTTTTGAC
ATATTTACAGGCCTGAAAAGGCCAGAAAATGCAATTTTTTCCAATTTTTG
CTTGTGGTGCGAATCAGTACCCCCAGGGGGGTTCGGCCAATTTTGGACTT
CTGACCTTAAAAATTGCGCATAATGCCTCACAATAGGTTAAATTTTCTTA
AAAAAACACTACATCTTGAATTTTCTGACTTTCACATTTGACGCCCCACC
CTAATAGTGCTGACTTTGAGACTTTCTTTTTGGTCAATTTTGGGATTTGA
AATTTTTGAGGAAACGGGTCCAGGTAAATTTCCAGGCCTTTTCTGCTACT
AGATAACGGTGGCAGAAACTCAATCTTTGCTTGAATTTTGAAACTCAATC
CTAATTTTTGTACATGACCCATGAGAATCATGTCAGAAGTTTGATGTCTT
AGGCCCTTATTGACAGAAAAAGCTTAATTCTCTGTGTTTTAATAGTTCCT
AACTAATTAAACAGGGTTGATTATTTTGTTCTTCGAAAAATTCAAACTCA
ATCTTTGAAATAAAAACGGTAGCAGCTCAAAACCCTGGAAATTTGCCTGA
TTTGAGTCTAATATTTCAAAATCTTGTGGTACTTTTCCAAGTGATATTTT
GAAATAATATTTCTATCCTTTCATTTTCTAGTTTGAAAAGACCATGAAGA
AAGAAGATGTATGTTTACTCTAAAAAGTGTGATACATTTGACGCTCTTTA
AATCTAACTCGACGTTTTTCTACCATTCGATACGCTACATTATTCGATAA
TATTGAAAGGTTCCGTCAACAAAAAAACTCATAAACCACGCTCCTCGATT
CAATACACTCACTTATTCGATAAAAATTTCCTCTAAAATCGAATTGGAAA
GCGTCAGCTTTATTTTTTGATTAGGTCTAGATTAGATTCCTTTCCATTTT
TACAATCAACATATGATTTGATGCATAGTTTGCGCACTTTCTAAGTATGG
AATACCATCTTGATCTAAAAACAGAAATAATGCTTGTATTGCAGTATTTA
GTGATCCAGGATTTTTCCATTGTGAATGGAGGTCCTTGTCTGCTCTCAAC
TTTATCACAATCGAATCTCAAAAATACAATTTATAGATATTAAACGCTTC
TTTGTTCAGGACATTGATACAGATGTCAAGGAAGAGTCTTCGGTTTTCAT
GTCACCAAACTCATTGAATACTGATGCTGTTGGTTTACCTGGTCTCTTGT
CAACTATAAATCATCCAGATAGGTATAGTTATGCCTTCCAAAAAGGTCGG
TTTCAACTTGCGCGCGCGCTTCGATCGCACTTTTACGAGTAAAGCTTCCA
CGCTATTGGTCAAAAGAAAAATGAAGCAACTCCATCAACGCAATCTGACG
TAACGGTTGAAAAAAAGCCGAAATGTGTTTTTTTCGAGCGCGTGCTATAT
TTTTATGACGTAATCTTTTTTCCAAGCAAAAAAATGAAGCCAGAAAGTGC
GATCGCAGCGCGCGCAAGTGGAGACCGGACTTAAGACGTGAAATTTCAAA
AAAATGCAATAAGGTCTGGGGATGTTGGATGATGGGAAATTTAACCAGGC
CCGATATCAAGCACCTCAGAGACTCTCCAAAAATCTCACCAAAAATTTGG
CATGTTTCATTCCCTTTCATTGGCGATCTACACATTGATGATTTTTGAGA
AAAAAAAGCCTTACAAAGTGTTTTGACGCAGAGTCAACTTTTTTCGTTAA
TGCAGGAAATCCGAAAATTTAAAGTGACGTCAAAAATCGAATGTTTAGAG
CCCAAAAATCTTGGTTCCAAAAACTTTCGATTAAGTCGCAAAGTGAAATA
GACGTTACTACCAAGAAAAAAGCCACAACCTCTACTTAGATTAAAGGCAA
ATGGATTAGCAGAAGAACTTTGCGTTAGGAAAACCGGTCCCCGTCACTTC
CCCGATGGGAATGTTTAATTTTTCACTTGTCATCGTACAGTTTTGCGTGA
GATCATGCAACTTCGATAAATTCCCAAATGGGCAAAAAAAAAACGAAAAT
ATTTCTCCAATGGAGCTGCTCTGGGGGACTGATAAGAAGAAAATATAAAC
TTGATCAATCTTCAATATAGTTTGGGAAAATAATTAGTAATTTTATACTA
TTTAGGAGCTCAAGCACAAGTGAGAGTATTTCGAAGAAGGTTTTACGAGA
TAGTGGTTTGTGCAGCAGCAAATCACAAGATGATGAGAGTGATGAACTTC
ATTCCATTATTTCAAATGTAACGTCCAAAATATTGAATGATGACAAAGCT
GGCACCAGTGATTCTTTCAATTTGGATCTCAAGATTACATCCAATGGTAA
TAATTTCCTGTTTTTATTTCTTGGGAGACACAAAAGGCTTGACTAAAAGC
AAACTGGGAAACAGAATTTTTTATCTTTAAGGGTATTTAATGATTCAGCA
TATCATCCAGAAATCTTCCTGGATTTTTTTTGATTTCCACTTCAAATATG
GTATTGCTTCGTTACTTTTTCGTTCCTTTTTTTTCCTTGTTGGACCTACC
CCGGTGGAGGTCCTATAAATTAACCTCTGCCCGTTCGTCCGTCCGTTCGT
TACCAACTTTTCTCGAGATTGGCTGATTAGTTTTTTTCTGATTTTTTGCA
CAAAGATGTGTAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGA
AAAAAAAAAATTGGGGGCAAATTTGGGCTAAAAACGTCTAAAAAAAGGGT
TTTTTGGACTTTGTGAAAAATTGGATCATTGTTTTTTTTCTGACTTTATG
CATGAAAGTAGGGTACCATCACAGGTAAAAAATGGCTCAAGCAGAATTTT
GCAAAAAGATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCA
CTATTGATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTTTA
TGAGATAGATTTTTTTTTTGCTCACAAGGGCTTACTTTTTGAAGAACATT
TGTGTTTAGACATGAAATTTTGGCTGCTTGGCGTGTTTTTATAGAAAAAC
TGGCCATATTCGATATTTTTTAATAAGCACATTATCAATTACTTAGGTAT
TAGCTTTTCTCGTGATTGGCTCTTTCATTCTTTATGATTTTGTGCACAAA
GATGCATAACTAAAATTTTTTGTAAAAAACGAATTTTTAAGCTCAAAAAA
CGCATCTTTATCTATAAGAATCACTATTACTAAGCATACATCAATGTTCT
TAGCCAAATTACTCAATTTTTTGATGAGATAGATGTCTTTTTTGCTCACG
AATATTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTCATAAGAA
ACAAACGACTAATTTTAATAGATCGTCACTCTATTTGTGTTCTGAATGAT
TGTTTAATGGTCACGCTCACGTAGATATCAATTATATATGTGTTAAATGC
ATAACCAGGTAGGTCCATAAAAGTATCACTTGCTGGATTTGGTCTAAAAC
GTTGATTAAAGGTGTCTAAATTGTTCTGATTCATCGCGATTTTGTGTTAA
GGTTGACTGCTAGGTTAGTCAAATGTCAAAATATTTTACTCATTCTTACT
AACATTTGTTTTATTCTCTTCAGAAAACAGACCACCACCAAATCATCCAC
GAAACGGATTACTTTCAAATCTTCTCAACCCATCAGACAGTCCAAAATCA
TTTACTTCAATCACAGATCCCGACATTAAACGTGACACGTCACTAAACAT
CACTCACGTTTACGAGCACGTTGAACCGAAATATCTAACGGACATTCTAC
GTACGAAAGTTCGAAACGTGTTACGTGAACATGACACGAAACAAACGATA
AATAATGAGCTCCACAAACGCCACGAAATTGTCATTCCTCTCGATGAGGA
TGATAAGGAAGATAGAGAAAGTATTTTCAGCGATAAAAGTGAAGAAATCC
TTGACTCAGACTCTGATTCAGATTTCGTTCCATCAAAATCGGACTCTGAA
GCTGAAATGTTTACAGAGCCAAAACGTACACGTAAAACACCGCAACGGTT
TTCGCCTAAAGCAGGGAAAGCTAAACGTCGAAAAACAATTGAAACAAAAA
CTCCTAAAGTTTTAAAAACAAAAGTTTCTGAGTCGAAAACTGCAACATCT
ACTCCACAAACTAGGCGACCACTTGGCCGACAGAATGGTACTAAAGTTGG
CAATAAATTTGTACATGATAAATGTGCGGCTTGGGATTGTATGAGACCTT
CGGCTGCTATTAAACAAATCACATGGGTAGCTTGTGATGATTGTGATGCG
TGGTATCATGTTTCATGCTCAGGGTTGAGTGCTTCTGATGCTATGAAACC
AGACACGAAATATCACTGTGGTTGTGGTTGA Coding sequence (CDS) from alignment at sc0000144_pilon:305532..311162- >XLOC_042334 ID=XLOC_042334|Name=XLOC_042334|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2916bp|location=Sequence derived from alignment at sc0000144_pilon:305532..311162- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTATTTTTCAATTAAGAAGAATTGGTCTTCCTCCATCAGTTGAAGA
TGCTAGAAGTACATACACATGTCTATTTTTCAATTAAGAAGAATTGGTCT
TCCTCCATCAGTTGAAGATGCTAGAAGTACATACACAATAAAAGGAGATT
CTTACATTGGACGTGGTAAAGATGTTGATATCTTTCTTGATTCAAACATC
CGAAAAGGATTGATTTCCAGAGCACATTCACACATCTTAAAGCAATCCTC
TGAAGATGGAAATGATATTTACTCTTTACATGATACAAGTTTGAATGGAA
CTTATGTGAACGATACTCGAATCAAAGGACCACAAGTGCTGAAAGATGGC
GATCGAGTTGTATTTGGACATTTGAGAGGTGCAATTATTGACCCAGGTGA
ATATGCACCACAAAATGAAACTGAATTTCTTTTCTTGAATAAAAGGAGAT
TCTTACATTGGACGTGGTAAAGATGTTGATATCTTTCTTGATTCAAACAT
CCGAAAAGGATTGATTTCCAGAGCACATTCACACATCTTAAAGCAATCCT
CTGAAGATGGAAATGATATTTACTCTTTACATGATACAAGTTTGAATGGA
ACTTATGTGAACGATACTCGAATCAAAGGACCACAAGTGCTGAAAGATGG
CGATCGAGTTGTATTTGGACATTTGAGAGGTGCAATTATTGACCCAGGTG
AATATGCACCACAAAATGAAACTGAATTTCTTTTCTTGTTTGAAAAGACC
ATGAAGAAAGAAGATTTTGAAAAGACCATGAAGAAAGAAGATGACATTGA
TACAGATGTCAAGGAAGAGTCTTCGGTTTTCATGTCACCAAACTCATTGA
ATACTGATGCTGTTGGTTTACCTGGTCTCTTGTCAACTATAAATCATCCA
GATAGGACATTGATACAGATGTCAAGGAAGAGTCTTCGGTTTTCATGTCA
CCAAACTCATTGAATACTGATGCTGTTGGTTTACCTGGTCTCTTGTCAAC
TATAAATCATCCAGATAGGAGCTCAAGCACAAGTGAGAGTATTTCGAAGA
AGGTTTTACGAGATAGTGGTTTGTGCAGCAGCAAATCACAAGATGATGAG
AGTGATGAACTTCATTCCATTATTTCAAATGTAACGTCCAAAATATTGAA
TGATGACAAAGCTGGCACCAGTGATTCTTTCAATTTGGATCTCAAGATTA
CATCCAATGGAGCTCAAGCACAAGTGAGAGTATTTCGAAGAAGGTTTTAC
GAGATAGTGGTTTGTGCAGCAGCAAATCACAAGATGATGAGAGTGATGAA
CTTCATTCCATTATTTCAAATGTAACGTCCAAAATATTGAATGATGACAA
AGCTGGCACCAGTGATTCTTTCAATTTGGATCTCAAGATTACATCCAATG
AAAACAGACCACCACCAAATCATCCACGAAACGGATTACTTTCAAATCTT
CTCAACCCATCAGACAGTCCAAAATCATTTACTTCAATCACAGATCCCGA
CATTAAACGTGACACGTCACTAAACATCACTCACGTTTACGAGCACGTTG
AACCGAAATATCTAACGGACATTCTACGTACGAAAGTTCGAAACGTGTTA
CGTGAACATGACACGAAACAAACGATAAATAATGAGCTCCACAAACGCCA
CGAAATTGTCATTCCTCTCGATGAGGATGATAAGGAAGATAGAGAAAGTA
TTTTCAGCGATAAAAGTGAAGAAATCCTTGACTCAGACTCTGATTCAGAT
TTCGTTCCATCAAAATCGGACTCTGAAGCTGAAATGTTTACAGAGCCAAA
ACGTACACGTAAAACACCGCAACGGTTTTCGCCTAAAGCAGGGAAAGCTA
AACGTCGAAAAACAATTGAAACAAAAACTCCTAAAGTTTTAAAAACAAAA
GTTTCTGAGTCGAAAACTGCAACATCTACTCCACAAACTAGGCGACCACT
TGGCCGACAGAATGGTACTAAAGTTGGCAATAAATTTGTACATGATAAAT
GTGCGGCTTGGGATTGTATGAGACCTTCGGCTGCTATTAAACAAATCACA
TGGGTAGCTTGTGATGATTGTGATGCGTGGTATCATGTTTCATGCTCAGG
GTTGAGTGCTTCTGATGCTATGAAACCAGACACGAAATATCACTGTGGTT
GTGGTTGAAAAACAGACCACCACCAAATCATCCACGAAACGGATTACTTT
CAAATCTTCTCAACCCATCAGACAGTCCAAAATCATTTACTTCAATCACA
GATCCCGACATTAAACGTGACACGTCACTAAACATCACTCACGTTTACGA
GCACGTTGAACCGAAATATCTAACGGACATTCTACGTACGAAAGTTCGAA
ACGTGTTACGTGAACATGACACGAAACAAACGATAAATAATGAGCTCCAC
AAACGCCACGAAATTGTCATTCCTCTCGATGAGGATGATAAGGAAGATAG
AGAAAGTATTTTCAGCGATAAAAGTGAAGAAATCCTTGACTCAGACTCTG
ATTCAGATTTCGTTCCATCAAAATCGGACTCTGAAGCTGAAATGTTTACA
GAGCCAAAACGTACACGTAAAACACCGCAACGGTTTTCGCCTAAAGCAGG
GAAAGCTAAACGTCGAAAAACAATTGAAACAAAAACTCCTAAAGTTTTAA
AAACAAAAGTTTCTGAGTCGAAAACTGCAACATCTACTCCACAAACTAGG
CGACCACTTGGCCGACAGAATGGTACTAAAGTTGGCAATAAATTTGTACA
TGATAAATGTGCGGCTTGGGATTGTATGAGACCTTCGGCTGCTATTAAAC
AAATCACATGGGTAGCTTGTGATGATTGTGATGCGTGGTATCATGTTTCA
TGCTCAGGGTTGAGTGCTTCTGATGCTATGAAACCAGACACGAAATATCA
CTGTGGTTGTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144_pilon | genome | sc0000144_pilon:305532..311162 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-1458:757 |
| Aaloc | 511-699:2226 |
| Aaloc | 397-507:3223 |
| Aaloc | 370-396:3701 |
| Aaloc | 70-369:5281 |
| Aaloc | 1-66:5632 |
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