XLOC_042328.2 (mRNA) -

Overview
NameXLOC_042328.2
Unique NameXLOC_042328.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000202_pilon:618053..618874+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042328.2 ID=XLOC_042328.2|Name=XLOC_042328.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=822bp|location=Sequence derived from alignment at sc0000202_pilon:618053..618874+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGGAAGGAATTGaattcttggaaaaaaatggtGGTCTTggttttttaaa atctttcaaaaatggtGTGCCCGAAAAGAATAAATTTGAAGGTTGTGTAA GCGAAGAATATGCATtagaaaagttgaatttgaaatcTGCTGAACTCCTT TCAAAAGGTGCTGATGTAGAAGAAAATTTAATTACTAATTACTTGAACCC AGAAGATCAGACCACTGACATtaacaaggaaaatgaaaaagatgacATCA AGGAACTGATCTCTGAAGAAGTTCTTACAGATCTAGAATcaggagatgtg aaagatgaAGAGTTAGAAGCTTCTGAAAAGAGAAAATGGTATTTGTCAAG AGTTGTTAACGGCGAGGTAAGGGATATCCATTTAGCACAGGCACTGAAAC TTTTCATCCCTCGTGAGTATGTCTCTAGAGAGAGGTCTAGAAGACACATT GCTGCCAAATTCCTCCCAGATCGAGGTGAACTGGATGAACAGCACAATGT GATTGCCTTTAGATTTGTTTTAGCTAAAGTTTCTGGGAAAATCTCTGTTT GCAAAGTGGCAGCACTTAATTGTAATGGTAAATCTGTGATGAGTGCTTCA AACTTGGATGACAAAGTAACTTGTCTTCTTATTCCTCTTGAAAAGGTGCC ATTAGAGACTAATTTGTATGTTTTGCCCATGAAAATTATTGTTAGCAGTT GGATCAAGGTGTCAAATGTGATTGGGGAGTTGAAGATGTCCTGTAACCAA AATGGACAGTACAACATATTAGAAAAATCCCTTAGTGTTTTACAGGAAgc tgaaaaatctcaaaatttgtcG

Coding sequence (CDS) from alignment at sc0000202_pilon:618053..618874+

>XLOC_042328.2 ID=XLOC_042328.2|Name=XLOC_042328.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000202_pilon:618053..618874+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGGAAGGAATTGaattcttggaaaaaaatggtGGTCTTggttttttaaa
atctttcaaaaatggtGTGCCCGAAAAGAATAAATTTGAAGGTTGTGTAA
GCGAAGAATATGCATtagaaaagttgaatttgaaatcTGCTGAACTCCTT
TCAAAAGGTGCTGATGTAGAAGAAAATTTAATTACTAATTACTTGAACCC
AGAAGATCAGACCACTGACATtaacaaggaaaatgaaaaagatgacATCA
AGGAACTGATCTCTGAAGAAGTTCTTACAGATCTAGAATcaggagatgtg
aaagatgaAGAGTTAGAAGCTTCTGAAAAGAGAAAATGGTATTTGTCAAG
AGTTGTTAACGGCGAGGTAAGGGATATCCATTTAGCACAGGCACTGAAAC
TTTTCATCCCTCGTGAGTATGTCTCTAGAGAGAGGTCTAGAAGACACATT
GCTGCCAAATTCCTCCCAGATCGAGGTGAACTGGATGAACAGCACAATGT
GATTGCCTTTAGATTTGTTTTAGCTAAAGTTTCTGGGAAAATCTCTGTTT
GCAAAGTGGCAGCACTTAATTGTAATGGTAAATCTGTGATGAGTGCTTCA
AACTTGGATGACAAAGTAACTTGTCTTCTTATTCCTCTTGAAAAGGTGCC
ATTAGAGACTAATTTGTATGTTTTGCCCATGAAAATTATTGTTAGCAGTT
GGATCAAGGTGTCAAATGTGATTGGGGAGTTGAAGATGTCCTGTAACCAA
AATGGACAGTACAACATATTAGAAAAATCCCTTAGTGTTTTACAGGAAgc
tgaaaaatctcaaaatttgtcGTCGGAAGGAATTGaattcttggaaaaaa
atggtGGTCTTggttttttaaaatctttcaaaaatggtGTGCCCGAAAAG
AATAAATTTGAAGGTTGTGTAAGCGAAGAATATGCATtagaaaagttgaa
tttgaaatcTGCTGAACTCCTTTCAAAAGGTGCTGATGTAGAAGAAAATT
TAATTACTAATTACTTGAACCCAGAAGATCAGACCACTGACATtaacaag
gaaaatgaaaaagatgacATCAAGGAACTGATCTCTGAAGAAGTTCTTAC
AGATCTAGAATcaggagatgtgaaagatgaAGAGTTAGAAGCTTCTGAAA
AGAGAAAATGGTATTTGTCAAGAGTTGTTAACGGCGAGGTAAGGGATATC
CATTTAGCACAGGCACTGAAACTTTTCATCCCTCGTGAGTATGTCTCTAG
AGAGAGGTCTAGAAGACACATTGCTGCCAAATTCCTCCCAGATCGAGGTG
AACTGGATGAACAGCACAATGTGATTGCCTTTAGATTTGTTTTAGCTAAA
GTTTCTGGGAAAATCTCTGTTTGCAAAGTGGCAGCACTTAATTGTAATGG
TAAATCTGTGATGAGTGCTTCAAACTTGGATGACAAAGTAACTTGTCTTC
TTATTCCTCTTGAAAAGGTGCCATTAGAGACTAATTTGTATGTTTTGCCC
ATGAAAATTATTGTTAGCAGTTGGATCAAGGTGTCAAATGTGATTGGGGA
GTTGAAGATGTCCTGTAACCAAAATGGACAGTACAACATATTAGAAAAAT
CCCTTAGTGTTTTACAGGAAgctgaaaaatctcaaaatttgtcG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042328.2XLOC_042328.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000202_pilongenomesc0000202_pilon:618053..618874 +
Properties
Property NameValue
Aaloc1-822:1