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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000543_pilon:30855..32825+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042324 ID=XLOC_042324|Name=XLOC_042324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1971bp|location=Sequence derived from alignment at sc0000543_pilon:30855..32825+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGACAACGAACAAGCTGTAGGAGGAAGACCTGGAAGCCCTATACC
TGAAGAAGTTCAACCTCCAGCAAAGAGATTCATGCTTCCAGACATAAAAT
CGGAATCAACATCCTGGGAACTGTCTGAGgaattggctgaatttttacAG
AACAGGAACCAGACCTATCTCCAAGAAAAGGAACTGGAGGTATTCACTAC
CATTCAACCACCAAAGAACATTAAAACTGCCACAAAATTGGATCCTTTCA
TGAAGGCACTACTGGACAAGAAGGGTCTTCATAAAATTGTGTCACAAGAC
AACGAAAACCAGAAAATACACGAGAGACTATTTCAAGTGTTAGGACCACT
GTCTTCAGCATGGCAAAAAATGCAGGACGTGGTTAACGGTGGTGATGAAG
TTGAAGAGATTGATCCTGCGACAGTTCTGGGAAATTTGAATGATGCTGTT
GTCATCTTGGGCCAAGTGATCAACAAGGTCACATATGAAAGGAGATTGTC
AATACTGGCAGGTTTGAATGACGTGAAACAGGCCAAGAGCCTTATTAAAG
ACAACGTTGAGGACCTGAACTCAGAGTCAAAATTTTTATTCGGTGAATGC
TTTCAAAAGCATGTGAAAGCAACAGCTAAGGCGCAAGATGCTGCAGAAAA
ACTCATGGGAAAGTCATCATCAACAGTCAGAAGACGTTTTCCACCAAATA
CTCGGCCCAATCAACAGGGCCCTTCCACGAACCACATGCCACGTGGAGGG
GTGTCAAGAGGTCGTGGTTTTAACAGATGGAACAGAGGTAAGAAAGTTTC
ATCAACCAAACATAACACTCAAGGACTCACAGGTAGCCAATCAATGGGAA
CCAGAGAGTCTCAATTTTGTCCACCCAAAGCTATCAAATCTTTTtccaga
aaattcaaaaatacaaaatattccGCAATCAGCGGGCAGGCTAAGGCTCT
TTCTAGTAAACTGGAAAATATTGACTTCAGATCAGACAATTCTAGAGATT
GTGAGCGGGTGGAGACTCCCAATAGTGGGCAAACCCCGACAGTGGGGGGA
ACCAAAACAAATTCCTATGACTcaggagaaaaaagaaatagtgaGCAAGG
AAATAGAGACTATGATACAGAAGGGTGCCCTGAAAGAGGTACAATCTGTG
AAGGACCAATTTCTGTCAACAATTTTTGTAAGGCCCAAAAAGGAGCCAAA
CAAGTTTCGCCCTATtatcaatttgaaaaaagtgaactCATACATGCCAT
ACATCCACTTCAAAATGGAAGGGATGAAGAATGTGTCAGACCTGTTGAAT
CAGGGAGACTacatgataaaaatagatttgaaGGATGCATATTGGCACAT
CCCAATCCATCCGGAGAGCCAAAAGTATTTACGTTTTCGatgggagaaaa
aactttacgaAATGTGTGTTCTAGCCTTTGGGGTAGGCCCAGGCCCACGA
ATCTTTACAAAATTACTGAAAGTACCATTGACAGTCCTAAGGAGGCTGAT
GATAAAACTAGTGGCATACTTAGACGACCTACTGATCATTGGATCGACAA
AAGAGGAAGCCATACAAGCAAGGGATTCAGTGTTATTCCTGCTGCAGAAA
TTAGGGTTTTCGATAAATTGGGAAAAATCAGAACTGAAGCCATCACAAGA
GATGGAGTTTCTTGGCATGATAATAAACAGCAACACAATGACAGTGTGGT
TGCCAGGAGAAAAGGTCCACAAAATATTGAACCTCTGTCAGGACACTCTG
AAACAGAAAGTTATAAGTTTAAGGAGTTTAGCGAGCCTAATAGGGAAACT
ACAGGCAACTCTGCCAGCCATATCAATGGCACCTATGCAAGTGAGAGCAT
TGCAACAAGACCTGATAGAGGGACAACATCAGAAACTGGGATACGAGGAG
GAAATAAAACTCTCGGAGGAATCCCTAAAGGAACTACAATGGTGGGTGAA
CAACATAACATTGAGCCAGGG Coding sequence (CDS) from alignment at sc0000543_pilon:30855..32825+ >XLOC_042324 ID=XLOC_042324|Name=XLOC_042324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000543_pilon:30855..32825+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGACAACGAACAAGCTGTAGGAGGAAGACCTGGAAGCCCTATACC
TGAAGAAGTTCAACCTCCAGCAAAGAGATTCATGCTTCCAGACATAAAAT
CGGAATCAACATCCTGGGAACTGTCTGAGgaattggctgaatttttacAG
AACAGGAACCAGACCTATCTCCAAGAAAAGGAACTGGAGGTATTCACTAC
CATTCAACCACCAAAGAACATTAAAACTGCCACAAAATTGGATCCTTTCA
TGAAGGCACTACTGGACAAGAAGGGTCTTCATAAAATTGTGTCACAAGAC
AACGAAAACCAGAAAATACACGAGAGACTATTTCAAGTGTTAGGACCACT
GTCTTCAGCATGGCAAAAAATGCAGGACGTGGTTAACGGTGGTGATGAAG
TTGAAGAGATTGATCCTGCGACAGTTCTGGGAAATTTGAATGATGCTGTT
GTCATCTTGGGCCAAGTGATCAACAAGGTCACATATGAAAGGAGATTGTC
AATACTGGCAGGTTTGAATGACGTGAAACAGGCCAAGAGCCTTATTAAAG
ACAACGTTGAGGACCTGAACTCAGAGTCAAAATTTTTATTCGGTGAATGC
TTTCAAAAGCATGTGAAAGCAACAGCTAAGGCGCAAGATGCTGCAGAAAA
ACTCATGGGAAAGTCATCATCAACAGTCAGAAGACGTTTTCCACCAAATA
CTCGGCCCAATCAACAGGGCCCTTCCACGAACCACATGCCACGTGGAGGG
GTGTCAAGAGGTCGTGGTTTTAACAGATGGAACAGAGGTAAGAAAGTTTC
ATCAACCAAACATAACACTCAAGGACTCACAGGTAGCCAATCAATGGGAA
CCAGAGAGTCTCAATTTTGTCCACCCAAAGCTATCAAATCTTTTtccaga
aaattcaaaaatacaaaatattccGCAATCAGCGGGCAGGCTAAGGCTCT
TTCTAGTAAACTGGAAAATATTGACTTCAGATCAGACAATTCTAGAGATT
GTGAGCGGGTGGAGACTCCCAATAGTGGGCAAACCCCGACAGTGGGGGGA
ACCAAAACAAATTCCTATGACTcaggagaaaaaagaaatagtgaGCAAGG
AAATAGAGACTATGATACAGAAGGGTGCCCTGAAAGAGGTACAATCTGTG
AAGGACCAATTTCTGTCAACAATTTTTGTAAGGCCCAAAAAGGAGCCAAA
CAAGTTTCGCCCTATtatcaatttgaaaaaagtgaactCATACATGCCAT
ACATCCACTTCAAAATGGAAGGGATGAAGAATGTGTCAGACCTGTTGAAT
CAGGGAGACTacatgataaaaatagatttgaaGGATGCATATTGGCACAT
CCCAATCCATCCGGAGAGCCAAAAGTATTTACGTTTTCGatgggagaaaa
aactttacgaAATGTGTGTTCTAGCCTTTGGGGTAGGCCCAGGCCCACGA
ATCTTTACAAAATTACTGAAAGTACCATTGACAGTCCTAAGGAGGCTGAT
GATAAAACTAGTGGCATACTTAGACGACCTACTGATCATTGGATCGACAA
AAGAGGAAGCCATACAAGCAAGGGATTCAGTGTTATTCCTGCTGCAGAAA
TTAGGGTTTTCGATAAATTGGGAAAAATCAGAACTGAAGCCATCACAAGA
GATGGAGTTTCTTGGCATGATAATAAACAGCAACACAATGACAGTGTGGT
TGCCAGGAGAAAAGGTCCACAAAATATTGAACCTCTGTCAGGACACTCTG
AAACAGAAAGTTATAAGTTTAAGGAGTTTAGCGAGCCTAATAGGGAAACT
ACAGGCAACTCTGCCAGCCATATCAATGGCACCTATGCAAGTGAGAGCAT
TGCAACAAGACCTGATAGAGGGACAACATCAGAAACTGGGATACGAGGAG
GAAATAAAACTCTCGGAGGAATCCCTAAAGGAACTACAATGGTGGGTGAA
CAACATAACATTGAGCCAGGGATGGCCGACAACGAACAAGCTGTAGGAGG
AAGACCTGGAAGCCCTATACCTGAAGAAGTTCAACCTCCAGCAAAGAGAT
TCATGCTTCCAGACATAAAATCGGAATCAACATCCTGGGAACTGTCTGAG
gaattggctgaatttttacAGAACAGGAACCAGACCTATCTCCAAGAAAA
GGAACTGGAGGTATTCACTACCATTCAACCACCAAAGAACATTAAAACTG
CCACAAAATTGGATCCTTTCATGAAGGCACTACTGGACAAGAAGGGTCTT
CATAAAATTGTGTCACAAGACAACGAAAACCAGAAAATACACGAGAGACT
ATTTCAAGTGTTAGGACCACTGTCTTCAGCATGGCAAAAAATGCAGGACG
TGGTTAACGGTGGTGATGAAGTTGAAGAGATTGATCCTGCGACAGTTCTG
GGAAATTTGAATGATGCTGTTGTCATCTTGGGCCAAGTGATCAACAAGGT
CACATATGAAAGGAGATTGTCAATACTGGCAGGTTTGAATGACGTGAAAC
AGGCCAAGAGCCTTATTAAAGACAACGTTGAGGACCTGAACTCAGAGTCA
AAATTTTTATTCGGTGAATGCTTTCAAAAGCATGTGAAAGCAACAGCTAA
GGCGCAAGATGCTGCAGAAAAACTCATGGGAAAGTCATCATCAACAGTCA
GAAGACGTTTTCCACCAAATACTCGGCCCAATCAACAGGGCCCTTCCACG
AACCACATGCCACGTGGAGGGGTGTCAAGAGGTCGTGGTTTTAACAGATG
GAACAGAGGTAAGAAAGTTTCATCAACCAAACATAACACTCAAGGACTCA
CAGGTAGCCAATCAATGGGAACCAGAGAGTCTCAATTTTGTCCACCCAAA
GCTATCAAATCTTTTtccagaaaattcaaaaatacaaaatattccGCAAT
CAGCGGGCAGGCTAAGGCTCTTTCTAGTAAACTGGAAAATATTGACTTCA
GATCAGACAATTCTAGAGATTGTGAGCGGGTGGAGACTCCCAATAGTGGG
CAAACCCCGACAGTGGGGGGAACCAAAACAAATTCCTATGACTcaggaga
aaaaagaaatagtgaGCAAGGAAATAGAGACTATGATACAGAAGGGTGCC
CTGAAAGAGGTACAATCTGTGAAGGACCAATTTCTGTCAACAATTTTTGT
AAGGCCCAAAAAGGAGCCAAACAAGTTTCGCCCTATtatcaatttgaaaa
aagtgaactCATACATGCCATACATCCACTTCAAAATGGAAGGGATGAAG
AATGTGTCAGACCTGTTGAATCAGGGAGACTacatgataaaaatagattt
gaaGGATGCATATTGGCACATCCCAATCCATCCGGAGAGCCAAAAGTATT
TACGTTTTCGatgggagaaaaaactttacgaAATGTGTGTTCTAGCCTTT
GGGGTAGGCCCAGGCCCACGAATCTTTACAAAATTACTGAAAGTACCATT
GACAGTCCTAAGGAGGCTGATGATAAAACTAGTGGCATACTTAGACGACC
TACTGATCATTGGATCGACAAAAGAGGAAGCCATACAAGCAAGGGATTCA
GTGTTATTCCTGCTGCAGAAATTAGGGTTTTCGATAAATTGGGAAAAATC
AGAACTGAAGCCATCACAAGAGATGGAGTTTCTTGGCATGATAATAAACA
GCAACACAATGACAGTGTGGTTGCCAGGAGAAAAGGTCCACAAAATATTG
AACCTCTGTCAGGACACTCTGAAACAGAAAGTTATAAGTTTAAGGAGTTT
AGCGAGCCTAATAGGGAAACTACAGGCAACTCTGCCAGCCATATCAATGG
CACCTATGCAAGTGAGAGCATTGCAACAAGACCTGATAGAGGGACAACAT
CAGAAACTGGGATACGAGGAGGAAATAAAACTCTCGGAGGAATCCCTAAA
GGAACTACAATGGTGGGTGAACAACATAACATTGAGCCAGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000543_pilon | genome | sc0000543_pilon:30855..32825 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1971:1 |
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