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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:403444..405641- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042304 ID=XLOC_042304|Name=XLOC_042304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2198bp|location=Sequence derived from alignment at sc0000007_pilon:403444..405641- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAGAATTCACAGCTAGTATGTCTGTCCCAGCAATCAGTTTGAA
CGATAATGAAGAAGAAAACGCAAATGAAAGAGGAAGAACTGAACGTAGTG
AAAGCTTCAAAGAGATGATGAGACATAGTATGCCATCGGTTGCTCGTAAC
GCATCGCCGAAACCTCATCGCAAACATCATCATCACCATCATCACCATCG
GCATCATAAATCCAAATCGCCGTCATCGTCACGACAAGATTTGACAAGTC
AAGACGATGCTTTCTCAAACGACGTTAAATCCTCATTTTTATCCATTGGA
AATCAAGCAGCTCGACTTCGAAGCAGCAGTGATAGCTCCATTCATGGAGT
CGAGCATCGTTTTGGTGATCATAGATCCTCAGAAGATTCGCCACTTCTTC
GTAGAGCAATCTATGGGCGACAGAAGAGTAAATACGATGACGATCACGAC
GTCGACAATGTTGGAGTAATGTTAAGTTTCCCAAACATCGGTAATGAGGT
TGATGATACTCATGAAGAGGATTTTGATCAAGAAACAACAACAATCTCTA
GAGATATTATTGGTGACTCTGTTGGAAAACATCATGATATCAATAGTGGT
GAAACGTTAACTAAACGCCGGGATGAGTTGGTTTCACAAGTGCAACGAAA
TGAAAATAGCCGCTCAAAGAAACGTGTATTGAAAATGATTGATCAATTGC
TGGAGCAATGTACTGATAATTTTCATCAAGTTGAAAGAGACATTGATTTC
CAATTCGCAAGACTTTACGTTGCACTTGAAAACAGGAAAAAGGAGTTAGT
CGAGGAAGCTAAACAGGCTCGTGATCAAAAGATTGAATCTTTAAAAGAAG
CAAAGAGAACCTGTTTAACCCAGGGGTCTAAGGCTACTTTATCCGTCCAA
TCGTCTTTTAGCTCTGACAATGACTCAGACAATGGTGAATGTTCTCCGAG
GCGTGATTCAGGTGGTGAACAGCAAGATAGCATTTGTCTGCAGCAAAATG
GTATCTTAGAGCCTTGGAAATCATTTGGCAAACAGGAAAAAGATCAAATG
AAGGCTGATCTAAACAAAGTTGTGGATTCCCTTAGCAATGGTAATAGCTT
GATGTTAGGAACTCTTGAAGAAGGGAACACTTGTTTTGATTTCAATGAGG
AGTCTATTGAGATTCTTTCAAACATTGGTAAACTCAAAGACTCTTTATCT
TCAGCTCAATTTTCCTTTACAAAAGGCTTACATTATGGAATTGCACTGGC
TGGCGAAGCAGTACACTTTGAAGTACATACAAGGAGTATCAATAACGAGG
TTTCATTCAATTCAATGGATGATATCAAATGCCAGATCTACAGTACTTCT
GGAGAATGTATAGAAGTGAGCCAGCAAGTTTCTCTTAGGCGTTCGTTGAG
TAACAGTCGAGTTGTCTCACACAATAATAAAAGCTCTTTAAATCGGTTTT
ATTCGTACGACTTTACCGCTCCTGAATCGGGCAAGTACGAGATTCGCATC
GCAATAAATGGAGTTGAAATCAAATCCAGTCCGTTTGTTTACTCAGTTTA
TCCAAAAGTAAATCTAGCTTTTGATGTTAAGTCACCTGGTGAAAGAACTG
AAGTGAATCTAACTGACAAGAGTAGTGGTACGCTGGAATCACGTCGTAAA
AACATGTCCCGACGTCAAAGCAGTGAAGACTCCGATTGGAGAGGTAATAA
CTGGATTGTGCAAAAAGGAGATAAATCAAGCATTTTACGTTCAATTAACG
ACGTACCTTCTTACATCTACGCTTTACCGTCCGTCAAAGGATTCTGCGCA
TGGAAGATACGCGTCACGTCGGCGTGCGAGAGTGCGAGAGTATTGATTTA
TCAGTCGGGGTTGGAACACATACTGGTATCCCTGATATTGATGAGCATTT
TTCATGTGATTTTCATATCAAACCTGATGGAAATAGACCTAAAGGAAATG
GTGCAGGGCGTATTCAAGTACGTCGTACGTCTTCCTTTACCCGTGTCTCG
ATCACCTATGATGTCTTATTGAGCACACACGAGGGTATGGTCCGTGTGAT
TTGTGAGCAACATGAACAAGACAAAACAGTTAGGATCAATCCAGAACTGT
TAGAACGTTTTGATTTGTTTCCGTTTATCAGCATGATACATAGACATGAT
GAATGTGGTAGACAGGTCTGTCCTAGACCACAAATAACACTTTTGTAA Coding sequence (CDS) from alignment at sc0000007_pilon:403444..405641- >XLOC_042304 ID=XLOC_042304|Name=XLOC_042304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4396bp|location=Sequence derived from alignment at sc0000007_pilon:403444..405641- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAGAATTCACAGCTAGTATGTCTGTCCCAGCAATCAGTTTGAA
CGATAATGAAGAAGAAAACGCAAATGAAAGAGGAAGAACTGAACGTAGTG
AAAGCTTCAAAGAGATGATGAGACATAGTATGCCATCGGTTGCTCGTAAC
GCATCGCCGAAACCTCATCGCAAACATCATCATCACCATCATCACCATCG
GCATCATAAATCCAAATCGCCGTCATCGTCACGACAAGATTTGACAAGTC
AAGACGATGCTTTCTCAAACGACGTTAAATCCTCATTTTTATCCATTGGA
AATCAAGCAGCTCGACTTCGAAGCAGCAGTGATAGCTCCATTCATGGAGT
CGAGCATCGTTTTGGTGATCATAGATCCTCAGAAGATTCGCCACTTCTTC
GTAGAGCAATCTATGGGCGACAGAAGAGTAAATACGATGACGATCACGAC
GTCGACAATGTTGGAGTAATGTTAAGTTTCCCAAACATCGGTAATGAGGT
TGATGATACTCATGAAGAGGATTTTGATCAAGAAACAACAACAATCTCTA
GAGATATTATTGGTGACTCTGTTGGAAAACATCATGATATCAATAGTGGT
GAAACGTTAACTAAACGCCGGGATGAGTTGGTTTCACAAGTGCAACGAAA
TGAAAATAGCCGCTCAAAGAAACGTGTATTGAAAATGATTGATCAATTGC
TGGAGCAATGTACTGATAATTTTCATCAAGTTGAAAGAGACATTGATTTC
CAATTCGCAAGACTTTACGTTGCACTTGAAAACAGGAAAAAGGAGTTAGT
CGAGGAAGCTAAACAGGCTCGTGATCAAAAGATTGAATCTTTAAAAGAAG
CAAAGAGAACCTGTTTAACCCAGGGGTCTAAGGCTACTTTATCCGTCCAA
TCGTCTTTTAGCTCTGACAATGACTCAGACAATGGTGAATGTTCTCCGAG
GCGTGATTCAGGTGGTGAACAGCAAGATAGCATTTGTCTGCAGCAAAATG
GTATCTTAGAGCCTTGGAAATCATTTGGCAAACAGGAAAAAGATCAAATG
AAGGCTGATCTAAACAAAGTTGTGGATTCCCTTAGCAATGGTAATAGCTT
GATGTTAGGAACTCTTGAAGAAGGGAACACTTGTTTTGATTTCAATGAGG
AGTCTATTGAGATTCTTTCAAACATTGGTAAACTCAAAGACTCTTTATCT
TCAGCTCAATTTTCCTTTACAAAAGGCTTACATTATGGAATTGCACTGGC
TGGCGAAGCAGTACACTTTGAAGTACATACAAGGAGTATCAATAACGAGG
TTTCATTCAATTCAATGGATGATATCAAATGCCAGATCTACAGTACTTCT
GGAGAATGTATAGAAGTGAGCCAGCAAGTTTCTCTTAGGCGTTCGTTGAG
TAACAGTCGAGTTGTCTCACACAATAATAAAAGCTCTTTAAATCGGTTTT
ATTCGTACGACTTTACCGCTCCTGAATCGGGCAAGTACGAGATTCGCATC
GCAATAAATGGAGTTGAAATCAAATCCAGTCCGTTTGTTTACTCAGTTTA
TCCAAAAGTAAATCTAGCTTTTGATGTTAAGTCACCTGGTGAAAGAACTG
AAGTGAATCTAACTGACAAGAGTAGTGGTACGCTGGAATCACGTCGTAAA
AACATGTCCCGACGTCAAAGCAGTGAAGACTCCGATTGGAGAGGTAATAA
CTGGATTGTGCAAAAAGGAGATAAATCAAGCATTTTACGTTCAATTAACG
ACGTACCTTCTTACATCTACGCTTTACCGTCCGTCAAAGGATTCTGCGCA
TGGAAGATACGCGTCACGTCGGCGTGCGAGAGTGCGAGAGTATTGATTTA
TCAGTCGGGGTTGGAACACATACTGGTATCCCTGATATTGATGAGCATTT
TTCATGTGATTTTCATATCAAACCTGATGGAAATAGACCTAAAGGAAATG
GTGCAGGGCGTATTCAAGTACGTCGTACGTCTTCCTTTACCCGTGTCTCG
ATCACCTATGATGTCTTATTGAGCACACACGAGGGTATGGTCCGTGTGAT
TTGTGAGCAACATGAACAAGACAAAACAGTTAGGATCAATCCAGAACTGT
TAGAACGTTTTGATTTGTTTCCGTTTATCAGCATGATACATAGACATGAT
GAATGTGGTAGACAGGTCTGTCCTAGACCACAAATAACACTTTTGTAAAT
GATGAAAGAATTCACAGCTAGTATGTCTGTCCCAGCAATCAGTTTGAACG
ATAATGAAGAAGAAAACGCAAATGAAAGAGGAAGAACTGAACGTAGTGAA
AGCTTCAAAGAGATGATGAGACATAGTATGCCATCGGTTGCTCGTAACGC
ATCGCCGAAACCTCATCGCAAACATCATCATCACCATCATCACCATCGGC
ATCATAAATCCAAATCGCCGTCATCGTCACGACAAGATTTGACAAGTCAA
GACGATGCTTTCTCAAACGACGTTAAATCCTCATTTTTATCCATTGGAAA
TCAAGCAGCTCGACTTCGAAGCAGCAGTGATAGCTCCATTCATGGAGTCG
AGCATCGTTTTGGTGATCATAGATCCTCAGAAGATTCGCCACTTCTTCGT
AGAGCAATCTATGGGCGACAGAAGAGTAAATACGATGACGATCACGACGT
CGACAATGTTGGAGTAATGTTAAGTTTCCCAAACATCGGTAATGAGGTTG
ATGATACTCATGAAGAGGATTTTGATCAAGAAACAACAACAATCTCTAGA
GATATTATTGGTGACTCTGTTGGAAAACATCATGATATCAATAGTGGTGA
AACGTTAACTAAACGCCGGGATGAGTTGGTTTCACAAGTGCAACGAAATG
AAAATAGCCGCTCAAAGAAACGTGTATTGAAAATGATTGATCAATTGCTG
GAGCAATGTACTGATAATTTTCATCAAGTTGAAAGAGACATTGATTTCCA
ATTCGCAAGACTTTACGTTGCACTTGAAAACAGGAAAAAGGAGTTAGTCG
AGGAAGCTAAACAGGCTCGTGATCAAAAGATTGAATCTTTAAAAGAAGCA
AAGAGAACCTGTTTAACCCAGGGGTCTAAGGCTACTTTATCCGTCCAATC
GTCTTTTAGCTCTGACAATGACTCAGACAATGGTGAATGTTCTCCGAGGC
GTGATTCAGGTGGTGAACAGCAAGATAGCATTTGTCTGCAGCAAAATGGT
ATCTTAGAGCCTTGGAAATCATTTGGCAAACAGGAAAAAGATCAAATGAA
GGCTGATCTAAACAAAGTTGTGGATTCCCTTAGCAATGGTAATAGCTTGA
TGTTAGGAACTCTTGAAGAAGGGAACACTTGTTTTGATTTCAATGAGGAG
TCTATTGAGATTCTTTCAAACATTGGTAAACTCAAAGACTCTTTATCTTC
AGCTCAATTTTCCTTTACAAAAGGCTTACATTATGGAATTGCACTGGCTG
GCGAAGCAGTACACTTTGAAGTACATACAAGGAGTATCAATAACGAGGTT
TCATTCAATTCAATGGATGATATCAAATGCCAGATCTACAGTACTTCTGG
AGAATGTATAGAAGTGAGCCAGCAAGTTTCTCTTAGGCGTTCGTTGAGTA
ACAGTCGAGTTGTCTCACACAATAATAAAAGCTCTTTAAATCGGTTTTAT
TCGTACGACTTTACCGCTCCTGAATCGGGCAAGTACGAGATTCGCATCGC
AATAAATGGAGTTGAAATCAAATCCAGTCCGTTTGTTTACTCAGTTTATC
CAAAAGTAAATCTAGCTTTTGATGTTAAGTCACCTGGTGAAAGAACTGAA
GTGAATCTAACTGACAAGAGTAGTGGTACGCTGGAATCACGTCGTAAAAA
CATGTCCCGACGTCAAAGCAGTGAAGACTCCGATTGGAGAGGTAATAACT
GGATTGTGCAAAAAGGAGATAAATCAAGCATTTTACGTTCAATTAACGAC
GTACCTTCTTACATCTACGCTTTACCGTCCGTCAAAGGATTCTGCGCATG
GAAGATACGCGTCACGTCGGCGTGCGAGAGTGCGAGAGTATTGATTTATC
AGTCGGGGTTGGAACACATACTGGTATCCCTGATATTGATGAGCATTTTT
CATGTGATTTTCATATCAAACCTGATGGAAATAGACCTAAAGGAAATGGT
GCAGGGCGTATTCAAGTACGTCGTACGTCTTCCTTTACCCGTGTCTCGAT
CACCTATGATGTCTTATTGAGCACACACGAGGGTATGGTCCGTGTGATTT
GTGAGCAACATGAACAAGACAAAACAGTTAGGATCAATCCAGAACTGTTA
GAACGTTTTGATTTGTTTCCGTTTATCAGCATGATACATAGACATGATGA
ATGTGGTAGACAGGTCTGTCCTAGACCACAAATAACACTTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:403444..405641 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1825-2190:367 |
| Aaloc | 1-1824:2199 |
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