XLOC_042300 (mRNA) -

Overview
NameXLOC_042300
Unique NameXLOC_042300
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:369662..370648-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042300 ID=XLOC_042300|Name=XLOC_042300|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=987bp|location=Sequence derived from alignment at sc0000007_pilon:369662..370648- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAGACTCTGGTAATCGAAAGATGATGAGCAACATCCGAGAATTATG CTGGGACATTCTGAGTCCAACTCTTGGTACTTTAGCATTCATCATAAATC TGCTAGAAATATTTTTCATCATTAAATTGAACAAGAAGCTGAATATTCCA CTCATTTATATATTAAGCTTGGCTATTTCTGATACTTTCATCGGCTTTAT CGAAATACTGATTAAAATGTTATATTTCATCAACATCAACTACCCTTCGA CACAAAGTAACCTTTACCTCGAGGTCTTCAACTTTCTGACCTATGTTGTT TTAAGAATATCGCTGATTATATCAGCCTTAAATCTGGTTGCAATAACGAT CGACCGACTCTATTGCGTCGTAAGGCCAGTCCAGTACCGTAAAAACAGTA AAAAGAAGGCTATTTTAATTTGCATTGGAATTTGGCTTGTATCTATTGTG TTTTTGACTGCTTTTCACTACGGCTTAAAAAATCACGCTGACCCTTTGAC AACGTGGCGTTTACAGTTTATTTTATATCCAATCGTAATTTTACCAGCAG CATTCTTGATGTCTGGGGTCTACTTCTTCATATGGTACTATTTCCGTAAA AGCAATAAACGGATGACTAGACTTCAGGAGGAAACGTCGACAATCCAGAA CCTTAGGAAACGCAAAGAAAAGAGACTATTGGTTCTTTCAGTAACTGTTG TGGCAGCTTTTATGATCTGTTGGCTACCAATGGCTTTCTATTGGGTATTA TTTATGTATTCAGTGAAAATGTCAGATGGAGTTAATATAGTATTCACAAT CGCTATATCTAATTCGGTCATTAATCCTCTGATTTACTTTCACTTTATTC GAAAATCAGTTTGGAAATGGTTTAAAGGCTTGTTTGAGAGGTTTCAAAGA AGAAAACAGAGAACCTTGAGTATTCGGAGGATGGACACTTCGACAACGAC TCTGGCAACCAGTGCTGAAGTTATCAGTCGTTTTTAA

Coding sequence (CDS) from alignment at sc0000007_pilon:369662..370648-

>XLOC_042300 ID=XLOC_042300|Name=XLOC_042300|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000007_pilon:369662..370648- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAGACTCTGGTAATCGAAAGATGATGAGCAACATCCGAGAATTATG
CTGGGACATTCTGAGTCCAACTCTTGGTACTTTAGCATTCATCATAAATC
TGCTAGAAATATTTTTCATCATTAAATTGAACAAGAAGCTGAATATTCCA
CTCATTTATATATTAAGCTTGGCTATTTCTGATACTTTCATCGGCTTTAT
CGAAATACTGATTAAAATGTTATATTTCATCAACATCAACTACCCTTCGA
CACAAAGTAACCTTTACCTCGAGGTCTTCAACTTTCTGACCTATGTTGTT
TTAAGAATATCGCTGATTATATCAGCCTTAAATCTGGTTGCAATAACGAT
CGACCGACTCTATTGCGTCGTAAGGCCAGTCCAGTACCGTAAAAACAGTA
AAAAGAAGGCTATTTTAATTTGCATTGGAATTTGGCTTGTATCTATTGTG
TTTTTGACTGCTTTTCACTACGGCTTAAAAAATCACGCTGACCCTTTGAC
AACGTGGCGTTTACAGTTTATTTTATATCCAATCGTAATTTTACCAGCAG
CATTCTTGATGTCTGGGGTCTACTTCTTCATATGGTACTATTTCCGTAAA
AGCAATAAACGGATGACTAGACTTCAGGAGGAAACGTCGACAATCCAGAA
CCTTAGGAAACGCAAAGAAAAGAGACTATTGGTTCTTTCAGTAACTGTTG
TGGCAGCTTTTATGATCTGTTGGCTACCAATGGCTTTCTATTGGGTATTA
TTTATGTATTCAGTGAAAATGTCAGATGGAGTTAATATAGTATTCACAAT
CGCTATATCTAATTCGGTCATTAATCCTCTGATTTACTTTCACTTTATTC
GAAAATCAGTTTGGAAATGGTTTAAAGGCTTGTTTGAGAGGTTTCAAAGA
AGAAAACAGAGAACCTTGAGTATTCGGAGGATGGACACTTCGACAACGAC
TCTGGCAACCAGTGCTGAAGTTATCAGTCGTTTTTAAGTTGAAGACTCTG
GTAATCGAAAGATGATGAGCAACATCCGAGAATTATGCTGGGACATTCTG
AGTCCAACTCTTGGTACTTTAGCATTCATCATAAATCTGCTAGAAATATT
TTTCATCATTAAATTGAACAAGAAGCTGAATATTCCACTCATTTATATAT
TAAGCTTGGCTATTTCTGATACTTTCATCGGCTTTATCGAAATACTGATT
AAAATGTTATATTTCATCAACATCAACTACCCTTCGACACAAAGTAACCT
TTACCTCGAGGTCTTCAACTTTCTGACCTATGTTGTTTTAAGAATATCGC
TGATTATATCAGCCTTAAATCTGGTTGCAATAACGATCGACCGACTCTAT
TGCGTCGTAAGGCCAGTCCAGTACCGTAAAAACAGTAAAAAGAAGGCTAT
TTTAATTTGCATTGGAATTTGGCTTGTATCTATTGTGTTTTTGACTGCTT
TTCACTACGGCTTAAAAAATCACGCTGACCCTTTGACAACGTGGCGTTTA
CAGTTTATTTTATATCCAATCGTAATTTTACCAGCAGCATTCTTGATGTC
TGGGGTCTACTTCTTCATATGGTACTATTTCCGTAAAAGCAATAAACGGA
TGACTAGACTTCAGGAGGAAACGTCGACAATCCAGAACCTTAGGAAACGC
AAAGAAAAGAGACTATTGGTTCTTTCAGTAACTGTTGTGGCAGCTTTTAT
GATCTGTTGGCTACCAATGGCTTTCTATTGGGTATTATTTATGTATTCAG
TGAAAATGTCAGATGGAGTTAATATAGTATTCACAATCGCTATATCTAAT
TCGGTCATTAATCCTCTGATTTACTTTCACTTTATTCGAAAATCAGTTTG
GAAATGGTTTAAAGGCTTGTTTGAGAGGTTTCAAAGAAGAAAACAGAGAA
CCTTGAGTATTCGGAGGATGGACACTTCGACAACGACTCTGGCAACCAGT
GCTGAAGTTATCAGTCGTTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042300XLOC_042300-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007_pilongenomesc0000007_pilon:369662..370648 -
Properties
Property NameValue
Aaloc1-987:988