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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2258423..2260961+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042287 ID=XLOC_042287|Name=XLOC_042287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2539bp|location=Sequence derived from alignment at sc0000006_pilon:2258423..2260961+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTTGTTGCACCATTTATTTGTTGGTCTGATACTAGTGTGGAGTTT
TTCAATCGCTGTAGCAGCTGATGATCTACCTATaagtaagttttaaaatg
atatcaatagacgatatcggatttagatatatgcaatgcattctggtttc
tagggactctcaaaggaattataatctattataattgatctattataatt
cctttgagagtccctagaaaccagaatgcattgcatttatctaaatccga
tatcgtctattgatgAATATTCAATCTTATTTTGCAAATATCTATCAACT
CTTGATTAGGTGAATGTTTACGGAGGTTGGATGTATTTAATGTCTAATAT
GCATCATTACAAAAACTTCACACATTTGATTGGCGTCACTGGAAAGTGGC
AGACTAACTCCCTTTTGgagattttgataaatttaaggCTTTAATTTTTG
TGTCTCGCAAATTAGATTACAAATATAGCTAGTATACACGGACCCATAGT
TTGAAATTCTTGCTAAGAGTCACCAGCTTATCAAAGCTAAAATGTTCTAT
CTTtcaatttttaggtttttgtatTGGAAAGCAACGTTGGAACAACCATC
CAACCGATTGTGGTAAATACGTTCAATGCAATCAGCTCACTGGTGTTCCA
TTCGTCGGTGTTTGTTCACCAGGGTTGCATTGGGACAATGATAAGTTATC
ATGCAATTTTCCTTTCTTCGTTAACTGTAAAGCAGGTACGtgttatgaat
atttttctttttatgtaataaaggttttatttttacacaagtgttcccgt
ttcatataaaaaaagtttttattttcctctttctaaccaatcttgcttga
catccgtgtcaatccaagcCCTTGATATTCAAAATTGATCTTTATACTAT
GGATCGATTTAAAATTAAAGGAAAAAGAACTTGTATCGATGGATAAACTT
AGGGCAAACTTACCCCTCCCTGAATATATTCTAATATCGGCCATCTAATA
TGAAACAGAGGTAACAGATAggtaatttttttgtcaattctaccgCCTAA
AAGGAGCAAAGTTCAACTAGGTATCCTACGAAAACCTGTTTAAGGACCTT
TTCTGAATGTCGAATGgttttcattttcagcattttagCCAATCATTTTG
AATAAGTATTGCGTTTCCAATAGGTGGATCAGGAATGGCAGTTAACAAAC
AGACCACTATGAAACCTACAATGAGAACAACAGATAGATTGATGACTACA
ATGCGGAAAACCACACCCAAGAAGATGTCAAAAGACAGTTGTATGGGTAA
AGATGGCAAATATTATTCAGCAGGGAAATCTTTTGATGAGGGATACGACA
GCATGAGGAATATATGTTTCGGAGAATTCTGTGGCTCTAGTGGACGATCT
TTTCGATGGGAGAAATCTGACTGTAAAATgacaactacaacaacgacgAC
TATGACCACCCCTACTAATAAATGTATGGGAAAAAATGGTATGTATTATT
CTACAGGTCAAACCTTTGATGAAGGTTATGACCCAATGGAAAACACCTGC
TATGGTAGCTTCTGTGGAAGTAATGGAATATCTTTTCCATGGCAAAAATC
TGATTGTAgaacaataacaacaacgaccaccactccaacaacgacaacga
ccaccactcctacaactacaacaacaacaacaacacaatcACCAATGTGT
AAAGGAGAAAATGAAATGTATTATTCTGTTGGTCAATCgtttgatgaaaa
atatgatCCAATGGAGAATAGATGTTTCGGCAAATTTTGCAGTGTAAATG
GCCAGTCTTTCCCATGGGAGAGAGCAAACTGCAGAGCTACGACCACTTCT
ACAACAACCACTactacaacgaccacccctacaACAACTACAACGACCAC
TCCATTGAATATGTGTAAAGGAAAGAATGGAGTATACTATTCTCCAGGTC
AGTCTTTTGATGAGGGATACGAACCGAATGAAAACACGTGTTACGGGAAA
TTTTGTGGAGGTAATGGAAAATCATTCCCTTGGGTAAAATCTAACTGTCG
AGAaacaaccactacttcaacaactacaacaaccactcccacaactacta
cgaccactccaacaactactacaaccaccccaacgacaacaacGACCATG
TCAAACATGTGCAAAGGAAAAGATGGAAAATATTATGCCCCAGGAGAGTC
TTACGATGAGGAGTACAATGCGatgaaaaacagttgttttgGAAAGTTTT
GTGTCGGCATAGGACAATCTTTTCCTTGGGAAAAATCTAATTGTAGAGAA
ACCACAATGAAACCTACAATGACAACAACGACCACACCAATGCCTACTAC
GACAACCCCGACAACAACAATAACTACCACTAAACTGGAAACAACCGTGT
CAAACATGTGCAAAGGAAAAGATGGAAAATATTATGCTCCCGGAGAGTCT
TACGATGAGGAGTACAACGCAatgaaaaacagttgttttgGAAAGTTTTG
TGTCGGCATAGGAGAATCTTTTCCTTGGGAAAAATCTAA Coding sequence (CDS) from alignment at sc0000006_pilon:2258423..2260961+ >XLOC_042287 ID=XLOC_042287|Name=XLOC_042287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2994bp|location=Sequence derived from alignment at sc0000006_pilon:2258423..2260961+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTTGTTGCACCATTTATTTGTTGGTCTGATACTAGTGTGGAGTTT
TTCAATCGCTGTAGCAGCTGATGATCTACCTATaaATGATTTTGTTGCAC
CATTTATTTGTTGGTCTGATACTAGTGTGGAGTTTTTCAATCGCTGTAGC
AGCTGATGATCTACCTATaagtttttgtatTGGAAAGCAACGTTGGAACA
ACCATCCAACCGATTGTGGTAAATACGTTCAATGCAATCAGCTCACTGGT
GTTCCATTCGTCGGTGTTTGTTCACCAGGGTTGCATTGGGACAATGATAA
GTTATCATGCAATTTTCCTTTCTTCGTTAACTGTAAAGCAGgtttttgta
tTGGAAAGCAACGTTGGAACAACCATCCAACCGATTGTGGTAAATACGTT
CAATGCAATCAGCTCACTGGTGTTCCATTCGTCGGTGTTTGTTCACCAGG
GTTGCATTGGGACAATGATAAGTTATCATGCAATTTTCCTTTCTTCGTTA
ACTGTAAAGCAGGTGGATCAGGAATGGCAGTTAACAAACAGACCACTATG
AAACCTACAATGAGAACAACAGATAGATTGATGACTACAATGCGGAAAAC
CACACCCAAGAAGATGTCAAAAGACAGTTGTATGGGTAAAGATGGCAAAT
ATTATTCAGCAGGGAAATCTTTTGATGAGGGATACGACAGCATGAGGAAT
ATATGTTTCGGAGAATTCTGTGGCTCTAGTGGACGATCTTTTCGATGGGA
GAAATCTGACTGTAAAATgacaactacaacaacgacgACTATGACCACCC
CTACTAATAAATGTATGGGAAAAAATGGTATGTATTATTCTACAGGTCAA
ACCTTTGATGAAGGTTATGACCCAATGGAAAACACCTGCTATGGTAGCTT
CTGTGGAAGTAATGGAATATCTTTTCCATGGCAAAAATCTGATTGTAgaa
caataacaacaacgaccaccactccaacaacgacaacgaccaccactcct
acaactacaacaacaacaacaacacaatcACCAATGTGTAAAGGAGAAAA
TGAAATGTATTATTCTGTTGGTCAATCgtttgatgaaaaatatgatCCAA
TGGAGAATAGATGTTTCGGCAAATTTTGCAGTGTAAATGGCCAGTCTTTC
CCATGGGAGAGAGCAAACTGCAGAGCTACGACCACTTCTACAACAACCAC
TactacaacgaccacccctacaACAACTACAACGACCACTCCATTGAATA
TGTGTAAAGGAAAGAATGGAGTATACTATTCTCCAGGTCAGTCTTTTGAT
GAGGGATACGAACCGAATGAAAACACGTGTTACGGGAAATTTTGTGGAGG
TAATGGAAAATCATTCCCTTGGGTAAAATCTAACTGTCGAGAaacaacca
ctacttcaacaactacaacaaccactcccacaactactacgaccactcca
acaactactacaaccaccccaacgacaacaacGACCATGTCAAACATGTG
CAAAGGAAAAGATGGAAAATATTATGCCCCAGGAGAGTCTTACGATGAGG
AGTACAATGCGatgaaaaacagttgttttgGAAAGTTTTGTGTCGGCATA
GGACAATCTTTTCCTTGGGAAAAATCTAATTGTAGAGAAACCACAATGAA
ACCTACAATGACAACAACGACCACACCAATGCCTACTACGACAACCCCGA
CAACAACAATAACTACCACTAAACTGTGGATCAGGAATGGCAGTTAACAA
ACAGACCACTATGAAACCTACAATGAGAACAACAGATAGATTGATGACTA
CAATGCGGAAAACCACACCCAAGAAGATGTCAAAAGACAGTTGTATGGGT
AAAGATGGCAAATATTATTCAGCAGGGAAATCTTTTGATGAGGGATACGA
CAGCATGAGGAATATATGTTTCGGAGAATTCTGTGGCTCTAGTGGACGAT
CTTTTCGATGGGAGAAATCTGACTGTAAAATgacaactacaacaacgacg
ACTATGACCACCCCTACTAATAAATGTATGGGAAAAAATGGTATGTATTA
TTCTACAGGTCAAACCTTTGATGAAGGTTATGACCCAATGGAAAACACCT
GCTATGGTAGCTTCTGTGGAAGTAATGGAATATCTTTTCCATGGCAAAAA
TCTGATTGTAgaacaataacaacaacgaccaccactccaacaacgacaac
gaccaccactcctacaactacaacaacaacaacaacacaatcACCAATGT
GTAAAGGAGAAAATGAAATGTATTATTCTGTTGGTCAATCgtttgatgaa
aaatatgatCCAATGGAGAATAGATGTTTCGGCAAATTTTGCAGTGTAAA
TGGCCAGTCTTTCCCATGGGAGAGAGCAAACTGCAGAGCTACGACCACTT
CTACAACAACCACTactacaacgaccacccctacaACAACTACAACGACC
ACTCCATTGAATATGTGTAAAGGAAAGAATGGAGTATACTATTCTCCAGG
TCAGTCTTTTGATGAGGGATACGAACCGAATGAAAACACGTGTTACGGGA
AATTTTGTGGAGGTAATGGAAAATCATTCCCTTGGGTAAAATCTAACTGT
CGAGAaacaaccactacttcaacaactacaacaaccactcccacaactac
tacgaccactccaacaactactacaaccaccccaacgacaacaacGACCA
TGTCAAACATGTGCAAAGGAAAAGATGGAAAATATTATGCCCCAGGAGAG
TCTTACGATGAGGAGTACAATGCGatgaaaaacagttgttttgGAAAGTT
TTGTGTCGGCATAGGACAATCTTTTCCTTGGGAAAAATCTAATTGTAGAG
AAACCACAATGAAACCTACAATGACAACAACGACCACACCAATGCCTACT
ACGACAACCCCGACAACAACAATAACTACCACTAAACTGAGAATCTTTTC
CTTGGGAAAAATCTAAGAGAATCTTTTCCTTGGGAAAAATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2258423..2260961 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1471-1497:2513 |
| Aaloc | 259-1467:1176 |
| Aaloc | 88-255:567 |
| Aaloc | 1-84:1 |
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