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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1297637..1302127- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042249 ID=XLOC_042249|Name=XLOC_042249|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4491bp|location=Sequence derived from alignment at sc0000044_pilon:1297637..1302127- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACCTAATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAA
AGATCCTAAACGAGAATTAGCTTTGATATTCACCATACAGTATGCATTAG
AGGCATTCAATCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGT
TTACTATTCGGTAAAATCTCCGAAAAAGATCGAGTGTTCACAGAAGGATC
GTTACCGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGT
TCTCCTTATATTTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGG
TAAGAACCAACAATTTTGGTTTTATGGTACCTTTTGAACTAAATGTTGCG
ATTTTTCGAGCTCGCCAAAGTTTGTACGCCTAAAGTTAGTTATTTCATCG
AAGGTTACAACCTCTAGAAGGTAGCTCGTTGGAGTCCAAAAGCCCCGTAT
TCTTGGGGAGCGTATAACTTTCACTTCTCAGCTACAAGATTTAGCAGAAA
TATTTTTCTGAATCGAAAGCTGTTGCGAGTTGTTCAATAGTTTCGCATAT
GTAGTTTGTGTACTTGAAAAGCATATACGATACTACTAGATTTTTTGACG
ATACTCAATTTTAAGATAATTTTCTTTTCAATTTTGTACAGGGCAACAAC
AGTTCGGAAAAGGATATGCTGGGGAATCTTTTTAACATACATGGCTGCAT
TATACACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACTCACTGTCT
GCTCCAAGGTAATCTTTTCACCTTCATCAATATTTGTAAACAAAGTTTCT
TTAAATCTTCAACCTCGTCCCTGTGGGCCATTTTTTAGATGTTTCTGACG
TGGATTTTCGTGCTTTTTATCCCGAAAACTCACCTCATCTATACATACAA
TAGCGAGATTATGTATCGCAGATATTCTACGGCTACGGTTGTGGGGCTGT
CCATACGGGTCGTCACCAAAGGCGACATGTCGTTGTCGACTTTGCTCTGT
ACGGGAAAAACACCAAAACACCGTCTAGGCAAAGTCGACATAATGCCGTA
CGTCAAATATCGAACTTGCTTTCACCCGCCATTACTTAACTTACTCGCCA
TTTCCCTCGCCACTTTAGCCGTAGCCGTAGAGAATTCCAAATACATAATC
TCGCTAATATGTGCAAATCGGGGGAGACCTACCTTAGATCGGGGTCAACT
CTTTTTTCGGATGGAGTGGTGAAATTGACTTTTTCATGAATTACGTAACA
TTTAACCTCTGACTCGTCTTGAAACAATTACCAAGGTGATTATGTCCCTT
GAGACAATCATTTTTAAATGAAAAGAATGCACCTCTGAGAAATATCAGTT
GAGGATAAGTTGTCACAGTACTACTTCGAAAAACGACGCAATTTATGAAA
AGACCTATTCGACGAAAATCTAAGCGGAATTTTGGAAATTAGGTCTACTG
TCAGTGACAGAAAATTGGACTATTTTAGTCTGGAACAGCGTGATTTAGCA
AAATAATCGGAAACAAGCGGAAAAAAGTCAAATTTTCTGATTTTTTTTTT
ACGAAAATCCTCAATTTAGAAAGATATTTCATTGACGGACAGAACTTATA
TTTGTTTTTAACAAATGTCATTTTCCTTTAGCTGTCGTGACGGTGTTGTG
TTATATATCGACTTCAAAGTGTTCAAACCAAAATACCTGAATGCATGGTC
TTTCTTCTCTCTATGGAACACCATACTGGTAATTTATTCAAAATTTTATT
TTTTTCTTCGTTTGGGGATACCTTAAGGGAACTAACCTTCGCGGTGCGAG
GGTACTAATTTGGCGCCTTTTTACAATTAATTTTGCGGGTGACTTCCATT
TTTTGCCGAAATTCATTCATATTCCTAAGGGTTTTTGAGGACTTATAGTA
AAAATTGTATTTCGTGGAACTAATTTTCGCGTTAGACATCCAAAAATGCG
AAAATTGCTTCCGCTAATATTAGTCCACGAAAGTTAGTTCCCTTTAAATG
TTTTATTTTCGCCAGTATAAGTGTTCCTGTCGCATACCAGACAAATATTT
CATATCAGGACAGTATCTGCCAACTGTTATATTATGCTGATATAAGCAAA
AAAAATATTTTCTTTTCCGCTTTCTGACCAATCTTGCTCCACATCCGTGA
AAAAGAATTATGGGCCTAAAAAAACTTTTATTTCTTAGAAATTTTCCTGC
AAACTGAGATAAAAATGATGAAATCTTTTAATTTATAAGCAGAGCAGAAT
ACAAATACAAATATACTGTTTTTCATTGTGTCTGAATTTTTTATATGAGT
ACACGTTGTTGTTTTTTAAGAAACTAGCTTTACCAAGCAGCCTCAATGTT
TCTTAAAAAATCGGCCTTTTGAGCCTTAGTTAGATGTTTCTTACATGTTT
CTAAACTTTTTGACATAATCAGCCTATTTTTCATGCAAAGAAAAAAAAAA
TTTTGATTGGAAGGTTCTTAAAAAAATCGAGTGAAAAAATGTTATTTTCT
CATTCTAAGCCTCAGCATGTTTCTTAGATGTTTCCTAGTTTTCAGGCATT
CTGAGCCTCGTGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAACAACGTGT
AATTCTTCGTTTGGAAAAAACTTCGACAAATTATTTTTGGATCTACCTTG
TTAATTTGTATTATTTTAACTATTTTCAGGAAAATGCACAGAAAAGTTTT
ATATCGCTCGCCATCTTTGCCTTTCTTAACATTTCAAAGACACCACTGGA
AGAACGGCTACAGATGGTATTTGAATCTTCTTCTAATTTCTTGATTAATT
GTTTCTGTTCCAATAGTACCAACACAAAAATTTCCAATTTAGAATGTTAC
ATTTAGGATAGGCGAATTTAATGAATTTGAACTTGTTTTTCGAAAAATGA
CAAAATATTTTATCCTTTGTAGTTCAAAAATTGTTTTAAAATTTATGACT
ATTTTTTTAGATACTCTATGTTAAATAAGTTTTCAAGGGATAATCAGATT
TTGTTATTTGGTCAATTCAAAACTTGAAAATATTCAAAAATATTTCAAAA
TTTCCTAAAAAACAATAGGGACTAGACCTTCTTTTACCGAAGGTACTTTT
AAAACACTATCTGGTTATCCCTTGAATAATCAATTTTTAATTTTTTGTTC
CAGTCAGTTACTGTATGTCTGTTAAGTGTATTTAAAAAAATAACAGCCGT
ACTAAAACAGAATAGGAACATGCTTACCAACCAAAATGCCACGGGAATAA
ATAGCTTAATTTGATTTTGCGGTTATGGATATTTTATATAGCACACATTT
GGGGAATGAGTACAATAACGGAATTAGAAAAAGGTGAACCGGGGTGAGCT
CAGTGACGTAATTCGTGGCAAGGCAAGCCCGAAATGGCGCTCGTAGATCT
TGGCTAAACGATTTCATTTCAATCCAGTGGTTGTGCTTGAAGGTGACAAA
GGGAGAAGCAAACCTAATTGAAAAATCAAAACATTTTCAGAGATTGGGGA
TGTTAGTTACTTTCAGAAACACATGCATTCCCTATGTCCCCTTACTCGGA
AATTGCATTGGTGGGGAGAGAATGTAATTCGATATTCGACTTAGAAGGTT
ACTTGCCAAAATTCGAGCATTATCCCAAAGATCGAAATGAGTGTCAAAAG
GAAAGAGATGGCCTAAGGATTTCAAATTTTACTGGGTCGAGCAAAACAAA
TCAAAATGAAAAATAAGTCGGCAAGGATCATTCTCTTTTTCTTCATTTCA
TGGAACAAGAAAATAAAAAAATAAACGAAACATAGTCAATCAAAAATGAA
TCGAATGCTGAAAGCTCGAAACTTTATACCCGAAGGTAAACAATCAAATC
ACAAAAGCTGTTCAAGGCAGTATGAGTTACAACTTAATTCAAAAAATGAA
ACTTACAAATCTTACCTTTTCACCATAGGCGAGTATAGACAGCAAGACAG
GAGCCAATTCAAAATCAAAATTATTTTAATTTCACTTTTACTTGCGCTAT
CTACCTCCATACAAAACTTGCTCCATCTATTTTGATGTAGATCTACCAAT
TCAAAATATAATCATAAATTTAACTTCCACAAGAAACAACATCAAAAAGT
AGTGCCACATCTTTATCGATTTATTGAGCTTCTTCGTTGTGTCGTTGTTG
TTCCTCTTCTCCTTCTTTCCTCCATCAAGGTCAATTCGAAATGGAAACAA
TTTTTTGACAGTGTAATTAACCCTCACCGTCGAAGCTAGGTTCACTGGGT
TCACCTTGATTCAACCGGTTCACCAGATGGGTTCCCCCGGCTCACTTCTT
TCTATTTACGGTACAATAATTCAAATCTGGGGGATGGTAGGAACTTAATC
TGGCGGATTTTGCAAAACTATTTTCCTTAAGGACTGAAGACTTGTTGAAG
TTGATGTTTTCTGATTCTCCAAACCAAATCTAGCAAAAACTTTATCACTC
CCTTCCTCTAGATGACGCGGAAAGTGAGAGAATATTTATGA Coding sequence (CDS) from alignment at sc0000044_pilon:1297637..1302127- >XLOC_042249 ID=XLOC_042249|Name=XLOC_042249|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000044_pilon:1297637..1302127- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACCTAATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAA
AGATCCTAAACGAGAATTAGCTTTGATATTCACCATACAGTATGCATTAG
AGGCATTCAATCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGT
TTACTATTCGGTAAAATCTCCGAAAAAGATCGAGTGTTCACAGAAGGATC
GTTACCGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGT
TCTCCTTATATTTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGA
TGGAACCTAATGAATACAAACTACATTTCTTAAACATTGAAGTCTTCAAA
GATCCTAAACGAGAATTAGCTTTGATATTCACCATACAGTATGCATTAGA
GGCATTCAATCGGATACGTGATCACGAATCTAGAGTCAATTACCATTGTT
TACTATTCGGTAAAATCTCCGAAAAAGATCGAGTGTTCACAGAAGGATCG
TTACCGCTTTGTTTTTTGATCGGTGCAACGCAAGGTTTTGTCATTTTGTT
CTCCTTATATTTGTGGTATGAGATACGCAAGAATCGTTCAGTCTTTTGGG
CAACAACAGTTCGGAAAAGGATATGCTGGGGAATCTTTTTAACATACATG
GCTGCATTATACACATTAGCGCATCAAGGTCTACGTGCTGTTTGTAACTC
ACTGTCTGCTCCAAGGGCAACAACAGTTCGGAAAAGGATATGCTGGGGAA
TCTTTTTAACATACATGGCTGCATTATACACATTAGCGCATCAAGGTCTA
CGTGCTGTTTGTAACTCACTGTCTGCTCCAAGCTGTCGTGACGGTGTTGT
GTTATATATCGACTTCAAAGTGTTCAAACCAAAATACCTGAATGCATGGT
CTTTCTTCTCTCTATGGAACACCATACTGCTGTCGTGACGGTGTTGTGTT
ATATATCGACTTCAAAGTGTTCAAACCAAAATACCTGAATGCATGGTCTT
TCTTCTCTCTATGGAACACCATACTGGAAAATGCACAGAAAAGTTTTATA
TCGCTCGCCATCTTTGCCTTTCTTAACATTTCAAAGACACCACTGGAAGA
ACGGCTACAGATGGAAAATGCACAGAAAAGTTTTATATCGCTCGCCATCT
TTGCCTTTCTTAACATTTCAAAGACACCACTGGAAGAACGGCTACAGATG
ATGACGCGGAAAGTGAGAGAATATTTATGAATGACGCGGAAAGTGAGAGA
ATATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1297637..1302127 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 601-630:31 |
| Aaloc | 514-600:1813 |
| Aaloc | 418-513:2860 |
| Aaloc | 301-414:3850 |
| Aaloc | 1-297:4492 |
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