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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1516163..1521885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042243 ID=XLOC_042243|Name=XLOC_042243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5723bp|location=Sequence derived from alignment at sc0000044_pilon:1516163..1521885- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCAAAGTGAAAGTTTCGTTGTATTACTGTTTTCAGACTTATGG
ACCTCCATTTTATCAAGCATTTTTTGATTTTAAGTTAGGAGATACCATTT
CGTGTATACGTAGAGCAGTATATTTATACGCTTTGAGGAGCTCCATTAAT
ACATTTGAGGAGCTGATACTTTTGTTCGATGAGATTTGCCCAAAATTTCC
ACTGGATGACACAACTCGATATTCGACATTACTTTCTTCAAACAATGAAA
AGAATGAAATCAAACTTTATTTTTGCTTGAGTAGATGCAAGAAAAATCTA
GAATTAGTGGAACGAATGAACTCAAATAACCAACTCAGAGTTTTATGGAG
ATTGATCGTTCTCGCTTTTGGGACTAACAAAATGGTTACTTCATTTTACA
CTGATCAAAATATAGCCGAAATTTATGACCATATCGAGTCCATTACAGGA
TTACCTACTAAAAACCTGATGCTGATTTCGAATGAGAAAGAAATTTTTCA
ATATGCAAATCAGTCAGTTTTCAAACAAAATGACACTGAAACTGAAAGTA
TCTTAATATATGTTGTCGCCTACTTCCAAGAAAACAAAAAACTGGAAAAT
ATTTGTCTTCAATATGGAATCAAACATCTGAAATCACTCAAATTGAGATT
CTTAACAAAAGAAGAAGAGTTGAACCCAAGAGAAATGGGATCAATCAAAG
ACATTAAAAATTATGTTCATAAAACACATAATATTCCTCTCCATCAACAA
AGTATACTTTACCAACATCAAGAGATTGAAAACGATTCGACCAAAATATT
CGATCTTTTCTCACAAAAAGAACGTTTGGAAGGAGGAGTGATTTGTTTTA
ACGTTGTCATTAATAAGAAACCATTCGAAATCGAAACTGCGGTCTACCAT
TTAGGATTTGGAAGTTGTATGATGACGGTCGTACATGTCTCTTATTCAGA
CACAATTGCAGAGGTTAAAATGAAAATTCTTGAAAATCATTACGGCTGGA
AATTAGAAAATATCCAGAAACAGCTTGACGATAAGAGTTCTGCTGTTTCA
TCAACTGGTTGAGAGTCTCCTTCAGATATTTTTCGATTTGGAACTTATTC
TAATATTCATGAAAATTTCAAAACCGTAGAAGAATGCGGAATATCGCCAA
ATGTAAAATACGAATTAAGAGAATTTGTCTTGATTAGAATTCGTCAAATT
CGTTTAAATTCTACAGAGAAAAACATTGTGGAATATACAATTACCAAAGA
TTATTATCATCTCCAACTTGACAACGTGTTGAAAGCTTTTCGTAAGCAGT
ACAAAGTACATTGTAAGGAGTTACGTCTTTCACCTGGCCAAGAGGGTGTT
TCTAAAGATCGGTTCTCGAGAACAAGAATCGAAACCAATGTTTTCGTTAT
TGATTACATGGTCATAAAAAGGTCACAGCGAAAATGTGTGATTACGTGAA
ATTTGTGAATTGCTAGTTAATATTATTTAATTTAAACTTTCTGAAGCTCT
TTTTATTTTTTTGTTCGTTAGTGGTGAAATATTAGCAGAAAACGAATTTT
AGCAAAATCGATCGTAGCGAATCAAACCTTATTTGTCTATAAGACTTTAA
GAGACTTTATATCTATGGAAATTTTAAAACTAATTCCGTAGAGGGCTAAC
GAATTTTGACACTACAGCCACGAGTTTTCAGTTTGGGAGGGGGTGAGATT
GGAAAGATTTTGACTTTTTTCGTATCCGTAAATTTTTGCTTTAAATAAGC
TCAACTAGCTTAAAAGAAGCCTTAGAAAGGTCAAATTTAGCGAGAATAAG
GTTGTTGTAAAAAGGCCGCAATCCAATTCGGGGAGGGGGGGGTTGTGCTA
GAGTTCGTTTGTTTGTTCGAACTTTTCTCCAGATTGGGCCTTTCAATTTT
TCTGATATTTTGCACAAAGAATCAAAATGGTAAACCCTCGAATGTGACGG
AGCCCGATTTTCGAAAACAAAAATTTGGGTCAATTTGAGCTAAAATATGC
CTAGAAATGAGGTTTTTGGAGATTTGCTCAAGTTTGAATCATTGAATGTT
TCTGATTTTTTGCATAAAAACAGAGCACCATCATAGGGAAGAGACTTTTT
TGCTCAGAAAATGACTTTTTAGCTATAAGAATCACTATTTTATAAGCATA
GATCAATGTTTTTACATAAAATCACTCATTTTCTGCCTGGATGTTTTTTG
CTATTGAAATTCTACCTGTACGAAAGATCAGGGTTTAGGTTTGAAATTTT
GAGTTGCTAAAATGTTTTTTATAAGAACTGGGCCAAATTCTAAATTTATT
TATAAGCATATTGATAAAAAAAATTTTATTGGCCTGAGAAGAGCTTAAAA
ATTGTCATATTCCGCTAAAATACAGTGTACTTTTTGCTTGGATGAATTTC
TACAGGTCTACTTTTCATTGTTTGGAAATTCTGTTTTTCAGCTTTTTTAT
AAGCACATGCTTGGAAATTTGGCCAAAATATGCCATGAAGATACGTTAAA
TCAACGATGTAAAAATAATAGATAACCAACTACCTCTAGAAGGCACTTCT
CCCAAGAGAACAACCATTGTTTTCCTATTGAAATGAGCACTCTATTAAAG
AAAGCTCTGTGTGCAGTGCGTGTTATGCTTTTAGCTAGATTTTGACACAC
TTTTTGACATCCACTGAATTGATAGAAAATTTGAATTGTTATTTACAGTA
CTGCAAATTTTTGAATTTTTTTCTACACAATAAATTGAAGTTGAGATAAG
AATTGTTTGATACTTAAAGTTTCACGCAACTTTTCGTCACGATCTTCAGT
CAAAAATTCTATACAAAAAATTCGTTTCAAGTTTACAAAAATATACTGTG
CACTGTAGAGTCTTCGTCAAAGCAATTGACGTCATTTCAGTCTTTTCCAG
TCATTTCAGAAGAATTTTTTTCTAAAGATAAAGGTACCAATCTTTAGACA
AATTGAGTAAGGATCGGCCTGATACCACTTAATCTTCATCTGGATAAATA
AACGCTCATAAAATGCTGTTATCTGAAAAATATATGTGTGATTTGAAATG
CGATATCTCACGTATGAAAAGTGCATGAAGGTTACATGGTACAAAATAAA
CAGATGAATGTTTATAGAACAATAATATCTAATTAAAAAATTCCTTCTGT
GAGGCTGCCTATAGGAAAATACACTTTTTCTAACCCAAGTTTTGGAAAAA
TATACATCACGTGATCGATTTTGTCCAATAGAAGGTTGCAAATGAAGCAA
GTTTTTATTTAATTGCACTTTTTACGATGCAAAATGTCATTAATATTTTT
ACAACCGTAACACGGATGTTTTTTGAGAATCAAGGCAAGTTGGTTATCTA
TTATTTTTACATCGTTGGTTAAATCATCGCTTAAAAGAATGTCTTTAAGT
TTTAATGTCGGGTTACACATCTCAATTTGATTTTAGTTTTGATTGTTTTG
ATTTATAGTTTTAACTTGTTCTTAATATTTTGTCCGTCGAGGCCTTATGT
TCTTATATAGTTTGTTCTTATAAAAGGACGTGTAACTTAAAAGATTCACG
TTTTTGTTAGGATTTAAAACAGCACGTCATGTGTTTATAATCAAAATAAA
GCCGTTTTATAATTGATGAAAATTACCTGAGCGGTTTATTTATATTACAC
CAGATTACACGCTTTTTTATAAGAATGGTGTAAATCCATTTCATCATGGA
TATTCTTAACTTTTTTGGGAAAATCATCCTAAAATATTCTTACAGCATTC
CTAGGTTAGGATCTTAATTCAGACTAGATTTAACATTTAGTACATACGTC
TCAAGCATAAAATGACATTTTTGTGAAAGGCGTGAGCCTTGGTGTAATTG
ACAATTTATGATTAAAAACTGGCAATTTACAGTTAAAATTGTTCTGTAAA
TGGCATATTCTTAGCTTGAGTAGCAAAAATTCCATGATGGTGATATTCTT
ACCATTATTCTTAATTTTTTCATCATGGACATTTTTATAAAGTGTATTCT
TATAAAAAAAAAGCGTGTACATCAATGAAAGGAAAGAGAAATCTATTATA
TCATGAAAACGAAGAGAAAATTTAAATAAGAGATAATATGATGTTATGTA
GAGAGAACTTATATTATGGTTCGAATGAGTTGGTTTGATTTGAAATGATT
GCTTATCAAAAGTTACAGAGAGCACAACAATCATACGACAAACTAAAGGG
ATTCAACAAACTAAAGGGGTTCAATCGGGGATTCAACAAACTAAAGGGGT
TCAATTTCAAAAGACATTAATTTACTAGGAAACCTCGCAACCAACATGGC
CTTTGGTAAAGTGAAGGTGTCCGTTTATCATGGTTTTCATTTTAATCAAG
AGCCATTTTTTAACTCAAATAAATTTGAATTGAATGACAAAATATCATTT
GTAATGAGAAAGATTGCAGATTTTCTTGTACATGTACCAGTTGATCTGAT
GCTTATGTTTCAAGGAAACAATACTGAAACACCGCTTCGTGGTGATACGA
ACATTTCAGAACTTACTTTTGGTTTAAATGAAATCAAACTTTATTTTGGA
TTGAAAAGATGCAGACAATCTCTACAGCTTCTCGAACGGAAACAGACAAA
AGACTTGAAAATGTTATGGAGATTAACCGTTAGAGGATTTGGAATATCTA
ATCAAATAATTACAACAACATATACTGATCGCAATATGGCTGAAATTTAT
GAACATATCGGGGCCATTACAGGATTGCCAGCTGATCATTTGATAATGTT
CTCTAAAGATAAAGAAGTTTTCCCATACACTAGAGAGTCCGTTTTCGATG
GACAAAAAGATTTTCGTGAAAGTATGATCATGTTTGTTGTTGCTTATTTT
CAAGAAAACGAAAAGATGGACGATATATGTATTCAATATGGAATCAAACA
TCTGAAATCACTCAAGTTGAAATTCTTAACAAAAGAAGAAGAGTTGAATC
CAAGAGAAATGGAATCTATCCAAGACATTAAAAATTATGTTTATAAAACA
CATGATATTCCTCTCCATCAACAAAGTATACTTTTCCAACATCAAGAGAT
TGAAAACGATTCGACCAAGATATTTGATCTTTTGATGCAAAAAGAACGTT
TGGAAGGAGGAGTGATTTGTTTTAACGTTGTCATTAATAAGAAGCCGTTC
GAAATCGAAACTGCGGTCTACCATTTAGGATTTGGAAGTTCGATGATGAC
GGTCGTACATGTCTCTTATTCAGACACAATTGCAGAGGTTAAAATGAAAA
TTCTTGAAAATCATTACAGCTGGAAATTAGAAAATATCCAAAATCAACTT
GACGATGAGAGTTCTGCTGTTTCATCAACTGGTTGGGAGTCTCCTTCAGA
TTTTTTTCAATTTGGAACTTATTCTAATATTTATGAAAATTTCAAAACCG
TAGAAGAATGCGGAATATCGCCAAATGTAAAATACGAATTAAGAGAATTT
GTCTTGATTAGAATTCGTCAAATTCGTTTAGATTCTACAGAGAAAAACAT
TGTGGAATATACAATTACCAAAGATTATTATCATCTCCAACTTGACGAAG
TGTTGAAAGCTTTTCGTAAGCAATACAAAGTACATCGTAAGGAGTTGCGT
CTTTTACCTGGCCAAGAGGGTGTTTCTAAAGATCAGTTCTCGAGAACAAG
AATCGAAACCAATGTTTTCGTTATTGATTACATGGTCATAAAAAGGCCAC
AGCGAAAATGTGTGATTATGTGA Coding sequence (CDS) from alignment at sc0000044_pilon:1516163..1521885- >XLOC_042243 ID=XLOC_042243|Name=XLOC_042243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2898bp|location=Sequence derived from alignment at sc0000044_pilon:1516163..1521885- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTACCAAAGTGAAAGTTTCGTTGTATTACTGTTTTCAGACTTATGG
ACCTCCATTTTATCAAGCATTTTTTGATTTTAAGTTAGGAGATACCATTT
CGTGTATACGTAGAGCAGTATATTTATACGCTTTGAGGAGCTCCATTAAT
ACATTTGAGGAGCTGATACTTTTGTTCGATGAGATTTGCCCAAAATTTCC
ACTGGATGACACAACTCGATATTCGACATTACTTTCTTCAAACAATGAAA
AGAATGAAATCAAACTTTATTTTTGCTTGAGTAGATGCAAGAAAAATCTA
GAATTAGTGGAACGAATGAACTCAAATAACCAACTCAGAGTTTTATGGAG
ATTGATCGTTCTCGCTTTTGGGACTAACAAAATGGTTACTTCATTTTACA
CTGATCAAAATATAGCCGAAATTTATGACCATATCGAGTCCATTACAGGA
TTACCTACTAAAAACCTGATGCTGATTTCGAATGAGAAAGAAATTTTTCA
ATATGCAAATCAGTCAGTTTTCAAACAAAATGACACTGAAACTGAAAGTA
TCTTAATATATGTTGTCGCCTACTTCCAAGAAAACAAAAAACTGGAAAAT
ATTTGTCTTCAATATGGAATCAAACATCTGAAATCACTCAAATTGAGATT
CTTAACAAAAGAAGAAGAGTTGAACCCAAGAGAAATGGGATCAATCAAAG
ACATTAAAAATTATGTTCATAAAACACATAATATTCCTCTCCATCAAATG
TCTACCAAAGTGAAAGTTTCGTTGTATTACTGTTTTCAGACTTATGGACC
TCCATTTTATCAAGCATTTTTTGATTTTAAGTTAGGAGATACCATTTCGT
GTATACGTAGAGCAGTATATTTATACGCTTTGAGGAGCTCCATTAATACA
TTTGAGGAGCTGATACTTTTGTTCGATGAGATTTGCCCAAAATTTCCACT
GGATGACACAACTCGATATTCGACATTACTTTCTTCAAACAATGAAAAGA
ATGAAATCAAACTTTATTTTTGCTTGAGTAGATGCAAGAAAAATCTAGAA
TTAGTGGAACGAATGAACTCAAATAACCAACTCAGAGTTTTATGGAGATT
GATCGTTCTCGCTTTTGGGACTAACAAAATGGTTACTTCATTTTACACTG
ATCAAAATATAGCCGAAATTTATGACCATATCGAGTCCATTACAGGATTA
CCTACTAAAAACCTGATGCTGATTTCGAATGAGAAAGAAATTTTTCAATA
TGCAAATCAGTCAGTTTTCAAACAAAATGACACTGAAACTGAAAGTATCT
TAATATATGTTGTCGCCTACTTCCAAGAAAACAAAAAACTGGAAAATATT
TGTCTTCAATATGGAATCAAACATCTGAAATCACTCAAATTGAGATTCTT
AACAAAAGAAGAAGAGTTGAACCCAAGAGAAATGGGATCAATCAAAGACA
TTAAAAATTATGTTCATAAAACACATAATATTCCTCTCCATCAACAAAGT
ATACTTTTCCAACATCAAGAGATTGAAAACGATTCGACCAAGATATTTGA
TCTTTTGATGCAAAAAGAACGTTTGGAAGGAGGAGTGATTTGTTTTAACG
TTGTCATTAATAAGAAGCCGTTCGAAATCGAAACTGCGGTCTACCATTTA
GGATTTGGAAGTTCGATGATGACGGTCGTACATGTCTCTTATTCAGACAC
AATTGCAGAGGTTAAAATGAAAATTCTTGAAAATCATTACAGCTGGAAAT
TAGAAAATATCCAAAATCAACTTGACGATGAGAGTTCTGCTGTTTCATCA
ACTGGTTGGGAGTCTCCTTCAGATTTTTTTCAATTTGGAACTTATTCTAA
TATTTATGAAAATTTCAAAACCGTAGAAGAATGCGGAATATCGCCAAATG
TAAAATACGAATTAAGAGAATTTGTCTTGATTAGAATTCGTCAAATTCGT
TTAGATTCTACAGAGAAAAACATTGTGGAATATACAATTACCAAAGATTA
TTATCATCTCCAACTTGACGAAGTGTTGAAAGCTTTTCGTAAGCAATACA
AAGTACATCGTAAGGAGTTGCGTCTTTTACCTGGCCAAGAGGGTGTTTCT
AAAGATCAGTTCTCGAGAACAAGAATCGAAACCAATGTTTTCGTTATTGA
TTACATGGTCATAAAAAGGCCACAGCGAAAATGTGTGATTATGTGACAAA
GTATACTTTTCCAACATCAAGAGATTGAAAACGATTCGACCAAGATATTT
GATCTTTTGATGCAAAAAGAACGTTTGGAAGGAGGAGTGATTTGTTTTAA
CGTTGTCATTAATAAGAAGCCGTTCGAAATCGAAACTGCGGTCTACCATT
TAGGATTTGGAAGTTCGATGATGACGGTCGTACATGTCTCTTATTCAGAC
ACAATTGCAGAGGTTAAAATGAAAATTCTTGAAAATCATTACAGCTGGAA
ATTAGAAAATATCCAAAATCAACTTGACGATGAGAGTTCTGCTGTTTCAT
CAACTGGTTGGGAGTCTCCTTCAGATTTTTTTCAATTTGGAACTTATTCT
AATATTTATGAAAATTTCAAAACCGTAGAAGAATGCGGAATATCGCCAAA
TGTAAAATACGAATTAAGAGAATTTGTCTTGATTAGAATTCGTCAAATTC
GTTTAGATTCTACAGAGAAAAACATTGTGGAATATACAATTACCAAAGAT
TATTATCATCTCCAACTTGACGAAGTGTTGAAAGCTTTTCGTAAGCAATA
CAAAGTACATCGTAAGGAGTTGCGTCTTTTACCTGGCCAAGAGGGTGTTT
CTAAAGATCAGTTCTCGAGAACAAGAATCGAAACCAATGTTTTCGTTATT
GATTACATGGTCATAAAAAGGCCACAGCGAAAATGTGTGATTATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1516163..1521885 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 748-1449:703 |
| Aaloc | 1-747:5724 |
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