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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000062_pilon:730718..732757+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042235 ID=XLOC_042235|Name=XLOC_042235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2040bp|location=Sequence derived from alignment at sc0000062_pilon:730718..732757+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTAACTTTCTGACTCAATTGAACTATTGTGATAAAAAAGTCTGCAA
AGTATGGGAGAACGATTGTAATAAAGGAATAGATGTAGTAAAACCAACGC
TTCCAGGGCACACACCAAGACCGCTATACACAAATAAACCGCAACTTTCC
TGGTCCCTCTTACTGTCTTTCTCGCGGAGAGCAAGCGGGGGACAAGAACC
AACCACAACCATCTGCCCCGACCATCAGCTGTATGATACATTCGAATCGA
AATGTGTTCCATTTCGCTGTCCACCCAACTATGTGATAATCGACGGAGGT
GGAAAATGTGTTCGTCGCAAGCCTCTACTAACCATTGGTGATGAAGATAA
ACCAATAGTGGAAACTCGTGGTCTCACAACAGCAAAGACAGATAGAAGTT
TTCCGTTCAATAACTTAACAGAATTCTTTATTTCCAATTTCAAGTACGCC
CTTTATGTGATCCAACCAAAAACATTCAACGCATCTTCCGTCCAACACAA
TGCACCTTCCATTATCCCAAAAATCACATTAGAACATTTCGTAGAAGACA
ATTCTAGAATAGTCTACCGAACTTTGAATACTTCCACATTGCAAATATTC
GAGCAGCTCCAATTTAATGCAAATCCAAATACGAGCTTTGTATTGGCACC
TTACTTCGACGAGAGGTTGGTATCCAAAAATCATGGCTTAGACTTCTCTA
GGGTCTTCCCAGAACACCGAACTTGCgcaaaaccaaaaattgtctccatt
gatgaaattttattcaataaaaacacTGTGTCAAAAACAATGTCATACCG
AAATCAATCACTCCATCCATCAAACCTTACTCTTTGGATATCCAAAAGAA
GTTCGAATGATTCATTTCAAGAGTACTTCTCAGTTTGTGAAGGATTCTAT
TTAACAAAACCATGTTTCCGAAAAACTTTGAACAGCTCTGATATCATCAA
CATTACtgacaatttgaaattaataaCCAAATCGCATATTCAGTATACAT
TCAATGAATATATACCTACGTCTGACGGCTATGAAACTTGCGTTGCAAAC
AATAAAAACACCTCATCCATTTCGAAAGATAATGATAGATACTATATCAT
CCGCCAAATCGAGTTTTACATCACAGTCATAGGAACACCTCTTAGCATTG
TATGTTACATCTGGATCATCACcacatattttattttcaaggatTTGAGA
ACTGTACCAGGACTAAATAACTGTTTGATGTGTTTATCCTTACTCttttc
cgacatttttttcctgtCAACATTGAAAGCTCATGAAGATAAAACATCAT
GCACCACAGTAGCTGTAGCAATGCATTGGAGCCTTCTATCCGCTTTCTTC
TGGGTGTTGATAATTTCATACGATTTAGTGAAACGTTTTGGATCGTTCAC
TTCCAACTCGAGGGATCGTGAACTAAAAAGAATGTCTTATCGCTCAGCCA
TGGCGTTTGGTATCCCTCTCGTCATAGTTAGTATTGCTTTGGGACTTGAT
ACATCAGGAGATGTTGCTGTTGGTTACGGAGAGAACCATGTGTGTTGGAT
TACAAACTTAAACGCTAGGATCGTGTTGTACATTGTACCAACAGCTCTGG
TGATTTTGATCGCTCTGTTCACGCTCTCATTCACAGTTTTCAACATCATC
AAACAAAAGAGGCGTACGCAAAGCAAACTCGATCATTCCACagccaagaa
aacaaaaacattagacTATCTCAAAATGGCTATCAAACTTGCATTGATCC
TTGGGTTGACTGAGATTTTCGGTTACGTTCAATTGACCAATATTGAGGAC
AGTCAAAGTAAAGAAAGGACGAATGTTGTGTTCGCTTTTGTTTACTCAGT
GTTTCGTTCATTACGTGGAGTGATGTTATGGTTTGTTTATGTGGGAGGAC
CTCTCTCTAAACGATATCAAAAACGTGTTGTTAGATCACTGAGAAAATAT
TCCCACAAAAACAGAATGAGAACTCTTGACACTCAAACTTCTGCTGAAAC
GTCTTATGGTGGAAGTAGCTCTGCAAGCTcagaattttga Coding sequence (CDS) from alignment at sc0000062_pilon:730718..732757+ >XLOC_042235 ID=XLOC_042235|Name=XLOC_042235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4080bp|location=Sequence derived from alignment at sc0000062_pilon:730718..732757+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTAACTTTCTGACTCAATTGAACTATTGTGATAAAAAAGTCTGCAA
AGTATGGGAGAACGATTGTAATAAAGGAATAGATGTAGTAAAACCAACGC
TTCCAGGGCACACACCAAGACCGCTATACACAAATAAACCGCAACTTTCC
TGGTCCCTCTTACTGTCTTTCTCGCGGAGAGCAAGCGGGGGACAAGAACC
AACCACAACCATCTGCCCCGACCATCAGCTGTATGATACATTCGAATCGA
AATGTGTTCCATTTCGCTGTCCACCCAACTATGTGATAATCGACGGAGGT
GGAAAATGTGTTCGTCGCAAGCCTCTACTAACCATTGGTGATGAAGATAA
ACCAATAGTGGAAACTCGTGGTCTCACAACAGCAAAGACAGATAGAAGTT
TTCCGTTCAATAACTTAACAGAATTCTTTATTTCCAATTTCAAGTACGCC
CTTTATGTGATCCAACCAAAAACATTCAACGCATCTTCCGTCCAACACAA
TGCACCTTCCATTATCCCAAAAATCACATTAGAACATTTCGTAGAAGACA
ATTCTAGAATAGTCTACCGAACTTTGAATACTTCCACATTGCAAATATTC
GAGCAGCTCCAATTTAATGCAAATCCAAATACGAGCTTTGTATTGGCACC
TTACTTCGACGAGAGGTTGGTATCCAAAAATCATGGCTTAGACTTCTCTA
GGGTCTTCCCAGAACACCGAACTTGCgcaaaaccaaaaattgtctccatt
gatgaaattttattcaataaaaacacTGTGTCAAAAACAATGTCATACCG
AAATCAATCACTCCATCCATCAAACCTTACTCTTTGGATATCCAAAAGAA
GTTCGAATGATTCATTTCAAGAGTACTTCTCAGTTTGTGAAGGATTCTAT
TTAACAAAACCATGTTTCCGAAAAACTTTGAACAGCTCTGATATCATCAA
CATTACtgacaatttgaaattaataaCCAAATCGCATATTCAGTATACAT
TCAATGAATATATACCTACGTCTGACGGCTATGAAACTTGCGTTGCAAAC
AATAAAAACACCTCATCCATTTCGAAAGATAATGATAGATACTATATCAT
CCGCCAAATCGAGTTTTACATCACAGTCATAGGAACACCTCTTAGCATTG
TATGTTACATCTGGATCATCACcacatattttattttcaaggatTTGAGA
ACTGTACCAGGACTAAATAACTGTTTGATGTGTTTATCCTTACTCttttc
cgacatttttttcctgtCAACATTGAAAGCTCATGAAGATAAAACATCAT
GCACCACAGTAGCTGTAGCAATGCATTGGAGCCTTCTATCCGCTTTCTTC
TGGGTGTTGATAATTTCATACGATTTAGTGAAACGTTTTGGATCGTTCAC
TTCCAACTCGAGGGATCGTGAACTAAAAAGAATGTCTTATCGCTCAGCCA
TGGCGTTTGGTATCCCTCTCGTCATAGTTAGTATTGCTTTGGGACTTGAT
ACATCAGGAGATGTTGCTGTTGGTTACGGAGAGAACCATGTGTGTTGGAT
TACAAACTTAAACGCTAGGATCGTGTTGTACATTGTACCAACAGCTCTGG
TGATTTTGATCGCTCTGTTCACGCTCTCATTCACAGTTTTCAACATCATC
AAACAAAAGAGGCGTACGCAAAGCAAACTCGATCATTCCACagccaagaa
aacaaaaacattagacTATCTCAAAATGGCTATCAAACTTGCATTGATCC
TTGGGTTGACTGAGATTTTCGGTTACGTTCAATTGACCAATATTGAGGAC
AGTCAAAGTAAAGAAAGGACGAATGTTGTGTTCGCTTTTGTTTACTCAGT
GTTTCGTTCATTACGTGGAGTGATGTTATGGTTTGTTTATGTGGGAGGAC
CTCTCTCTAAACGATATCAAAAACGTGTTGTTAGATCACTGAGAAAATAT
TCCCACAAAAACAGAATGAGAACTCTTGACACTCAAACTTCTGCTGAAAC
GTCTTATGGTGGAAGTAGCTCTGCAAGCTcagaattttgaACTGGTAACT
TTCTGACTCAATTGAACTATTGTGATAAAAAAGTCTGCAAAGTATGGGAG
AACGATTGTAATAAAGGAATAGATGTAGTAAAACCAACGCTTCCAGGGCA
CACACCAAGACCGCTATACACAAATAAACCGCAACTTTCCTGGTCCCTCT
TACTGTCTTTCTCGCGGAGAGCAAGCGGGGGACAAGAACCAACCACAACC
ATCTGCCCCGACCATCAGCTGTATGATACATTCGAATCGAAATGTGTTCC
ATTTCGCTGTCCACCCAACTATGTGATAATCGACGGAGGTGGAAAATGTG
TTCGTCGCAAGCCTCTACTAACCATTGGTGATGAAGATAAACCAATAGTG
GAAACTCGTGGTCTCACAACAGCAAAGACAGATAGAAGTTTTCCGTTCAA
TAACTTAACAGAATTCTTTATTTCCAATTTCAAGTACGCCCTTTATGTGA
TCCAACCAAAAACATTCAACGCATCTTCCGTCCAACACAATGCACCTTCC
ATTATCCCAAAAATCACATTAGAACATTTCGTAGAAGACAATTCTAGAAT
AGTCTACCGAACTTTGAATACTTCCACATTGCAAATATTCGAGCAGCTCC
AATTTAATGCAAATCCAAATACGAGCTTTGTATTGGCACCTTACTTCGAC
GAGAGGTTGGTATCCAAAAATCATGGCTTAGACTTCTCTAGGGTCTTCCC
AGAACACCGAACTTGCgcaaaaccaaaaattgtctccattgatgaaattt
tattcaataaaaacacTGTGTCAAAAACAATGTCATACCGAAATCAATCA
CTCCATCCATCAAACCTTACTCTTTGGATATCCAAAAGAAGTTCGAATGA
TTCATTTCAAGAGTACTTCTCAGTTTGTGAAGGATTCTATTTAACAAAAC
CATGTTTCCGAAAAACTTTGAACAGCTCTGATATCATCAACATTACtgac
aatttgaaattaataaCCAAATCGCATATTCAGTATACATTCAATGAATA
TATACCTACGTCTGACGGCTATGAAACTTGCGTTGCAAACAATAAAAACA
CCTCATCCATTTCGAAAGATAATGATAGATACTATATCATCCGCCAAATC
GAGTTTTACATCACAGTCATAGGAACACCTCTTAGCATTGTATGTTACAT
CTGGATCATCACcacatattttattttcaaggatTTGAGAACTGTACCAG
GACTAAATAACTGTTTGATGTGTTTATCCTTACTCttttccgacattttt
ttcctgtCAACATTGAAAGCTCATGAAGATAAAACATCATGCACCACAGT
AGCTGTAGCAATGCATTGGAGCCTTCTATCCGCTTTCTTCTGGGTGTTGA
TAATTTCATACGATTTAGTGAAACGTTTTGGATCGTTCACTTCCAACTCG
AGGGATCGTGAACTAAAAAGAATGTCTTATCGCTCAGCCATGGCGTTTGG
TATCCCTCTCGTCATAGTTAGTATTGCTTTGGGACTTGATACATCAGGAG
ATGTTGCTGTTGGTTACGGAGAGAACCATGTGTGTTGGATTACAAACTTA
AACGCTAGGATCGTGTTGTACATTGTACCAACAGCTCTGGTGATTTTGAT
CGCTCTGTTCACGCTCTCATTCACAGTTTTCAACATCATCAAACAAAAGA
GGCGTACGCAAAGCAAACTCGATCATTCCACagccaagaaaacaaaaaca
ttagacTATCTCAAAATGGCTATCAAACTTGCATTGATCCTTGGGTTGAC
TGAGATTTTCGGTTACGTTCAATTGACCAATATTGAGGACAGTCAAAGTA
AAGAAAGGACGAATGTTGTGTTCGCTTTTGTTTACTCAGTGTTTCGTTCA
TTACGTGGAGTGATGTTATGGTTTGTTTATGTGGGAGGACCTCTCTCTAA
ACGATATCAAAAACGTGTTGTTAGATCACTGAGAAAATATTCCCACAAAA
ACAGAATGAGAACTCTTGACACTCAAACTTCTGCTGAAACGTCTTATGGT
GGAAGTAGCTCTGCAAGCTcagaattttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062_pilon | genome | sc0000062_pilon:730718..732757 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2040:1 |
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