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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000062_pilon:506565..508247+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042221 ID=XLOC_042221|Name=XLOC_042221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1683bp|location=Sequence derived from alignment at sc0000062_pilon:506565..508247+ (Clytia hemisphaerica_ch_hm2_pilon)
gaAAGAGTAGTGAAAATGCTCGTCTTGAAGCTGCTGCTGTTTTGTGGAAT
TTTCCATATTGGTTTGTGCTCCAATAAAAAGTATTGTGAGCCTTCATCCA
ACTCAACTTGCTGGCCAAGTCAAGGGGAATGGAACAGTTTTGGTGAAACC
TTAAATGGAACACTTCATCAACTTTCATCAGACGATTATGAACAATGCCA
GAAACAAGGTGACGATGCGTTCAACATCTCATCCACTGGAAATGGTATTT
GCATGCAATATCATGATTGCTCACGACGATTCTGTCAAAACAACACTTCT
TGGAATATCCCGGCTTACAGTGTGGAGGTCAAATCTGTAAGAGATGTTCA
ACTGGCCATTGCGTTTGCCAACAAACACAACATTGCTGTTACGATCAAAA
CATCTGGTCATTCGTATGCTGGCTCGAGTATGGGGAAATCTACTTTGCTG
ATTTGGACGCGCAATCTCCCTGAACACTTGAAAAGCGTGGACGATGTCAA
ACAAAACTTCACTGATTCTTGTGGAACCGTTTTCACTCATGCTGTCAAAG
TTGGTGGGGGTCAAAGATGGAATAGTGTGTACAAAGCCTTGAATTCAAAA
TACCATATTGTTGGAGGTGGTGGATTGACAGTATCTGCAGCAGGTGGCTG
GCTTCAAGGATGTGGTTTATCTGCCATGTCTCGCAAATACGGAATAGGCA
TTGATAATGTTATTGACTTTGATGTTGTTCTTGCAGATGGAAGCCATGTT
ACTGCAGATAAATGTTCTAATCCAGATTTGTTTTGGGCGCTAAGAGGCGG
AGGTGGTGGTACTTGGGGTGTTGTTACTGCAGTTCACTACAAAATTCGAC
CAGCCGAGCCTATTCTTGAATTTTACATGGAAATTAAGAATATTGGACCC
CCTTGGTATTACACAGGGACTGTAGACTCCTGGTTAGAACAATGGGtgaa
actttcaccaaagtTGGATAACCGTTGGGGAGGTTATTGGACATTGAACA
CacttattttgtattttcttggTTCTGAAGAAGATGCTAAAACTACTTTC
ATCAATGATTTCAATGAATGGAGAGACAGTTTGCCAGACCTTGAGAAACT
AGCTGTCGTGATGAACACTAAGATCGCTGACAGCTATTTCAATGTCCGTG
GAGGTGATGAAATGACAACCGATAAAACTGGACAAGGTACGATCGATATC
GCAAGTCGTTTGATTCCTCGTGATTTTGTTGTGAACGAACCTGATAAAGC
TTTGGATCATTTGAAATGGATGGTGAGGAACGgatttttcactttcaatt
aTCTCTTAGGAGGTGTAGTGATGAATCCTAGCAAAGACGAAACTGCTGTC
CATCCTGCAATGAGAAAAGCTGTTTGGCAAATCGAAACCTTCAATGACAA
AATGGCAAATTATCTGCGAGAAAATATCAAAGACACCGGAGCTGGATTCA
ACCATGCTTGGGCTAAAGAACCTGATTGGCGAAATTCTTTATGGGGAGAA
CAGTTGGAGAAATTGCAAgagttgaaaaagaaatatgattctGAAAATCG
TTTCAACTGTTGGCATTGTATTGGTTACCAAGGAGATGACTACCCACCAC
CATCAAGTTCTGCGACGAACATCTTCCAATCAACTTTCATGGTTGTAATT
GTATTTattattaccatatactacatTTTTTAA Coding sequence (CDS) from alignment at sc0000062_pilon:506565..508247+ >XLOC_042221 ID=XLOC_042221|Name=XLOC_042221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3366bp|location=Sequence derived from alignment at sc0000062_pilon:506565..508247+ (Clytia hemisphaerica_ch_hm2_pilon)
gaAAGAGTAGTGAAAATGCTCGTCTTGAAGCTGCTGCTGTTTTGTGGAAT
TTTCCATATTGGTTTGTGCTCCAATAAAAAGTATTGTGAGCCTTCATCCA
ACTCAACTTGCTGGCCAAGTCAAGGGGAATGGAACAGTTTTGGTGAAACC
TTAAATGGAACACTTCATCAACTTTCATCAGACGATTATGAACAATGCCA
GAAACAAGGTGACGATGCGTTCAACATCTCATCCACTGGAAATGGTATTT
GCATGCAATATCATGATTGCTCACGACGATTCTGTCAAAACAACACTTCT
TGGAATATCCCGGCTTACAGTGTGGAGGTCAAATCTGTAAGAGATGTTCA
ACTGGCCATTGCGTTTGCCAACAAACACAACATTGCTGTTACGATCAAAA
CATCTGGTCATTCGTATGCTGGCTCGAGTATGGGGAAATCTACTTTGCTG
ATTTGGACGCGCAATCTCCCTGAACACTTGAAAAGCGTGGACGATGTCAA
ACAAAACTTCACTGATTCTTGTGGAACCGTTTTCACTCATGCTGTCAAAG
TTGGTGGGGGTCAAAGATGGAATAGTGTGTACAAAGCCTTGAATTCAAAA
TACCATATTGTTGGAGGTGGTGGATTGACAGTATCTGCAGCAGGTGGCTG
GCTTCAAGGATGTGGTTTATCTGCCATGTCTCGCAAATACGGAATAGGCA
TTGATAATGTTATTGACTTTGATGTTGTTCTTGCAGATGGAAGCCATGTT
ACTGCAGATAAATGTTCTAATCCAGATTTGTTTTGGGCGCTAAGAGGCGG
AGGTGGTGGTACTTGGGGTGTTGTTACTGCAGTTCACTACAAAATTCGAC
CAGCCGAGCCTATTCTTGAATTTTACATGGAAATTAAGAATATTGGACCC
CCTTGGTATTACACAGGGACTGTAGACTCCTGGTTAGAACAATGGGtgaa
actttcaccaaagtTGGATAACCGTTGGGGAGGTTATTGGACATTGAACA
CacttattttgtattttcttggTTCTGAAGAAGATGCTAAAACTACTTTC
ATCAATGATTTCAATGAATGGAGAGACAGTTTGCCAGACCTTGAGAAACT
AGCTGTCGTGATGAACACTAAGATCGCTGACAGCTATTTCAATGTCCGTG
GAGGTGATGAAATGACAACCGATAAAACTGGACAAGGTACGATCGATATC
GCAAGTCGTTTGATTCCTCGTGATTTTGTTGTGAACGAACCTGATAAAGC
TTTGGATCATTTGAAATGGATGGTGAGGAACGgatttttcactttcaatt
aTCTCTTAGGAGGTGTAGTGATGAATCCTAGCAAAGACGAAACTGCTGTC
CATCCTGCAATGAGAAAAGCTGTTTGGCAAATCGAAACCTTCAATGACAA
AATGGCAAATTATCTGCGAGAAAATATCAAAGACACCGGAGCTGGATTCA
ACCATGCTTGGGCTAAAGAACCTGATTGGCGAAATTCTTTATGGGGAGAA
CAGTTGGAGAAATTGCAAgagttgaaaaagaaatatgattctGAAAATCG
TTTCAACTGTTGGCATTGTATTGGTTACCAAGGAGATGACTACCCACCAC
CATCAAGTTCTGCGACGAACATCTTCCAATCAACTTTCATGGTTGTAATT
GTATTTattattaccatatactacatTTTTTAAgaAAGAGTAGTGAAAAT
GCTCGTCTTGAAGCTGCTGCTGTTTTGTGGAATTTTCCATATTGGTTTGT
GCTCCAATAAAAAGTATTGTGAGCCTTCATCCAACTCAACTTGCTGGCCA
AGTCAAGGGGAATGGAACAGTTTTGGTGAAACCTTAAATGGAACACTTCA
TCAACTTTCATCAGACGATTATGAACAATGCCAGAAACAAGGTGACGATG
CGTTCAACATCTCATCCACTGGAAATGGTATTTGCATGCAATATCATGAT
TGCTCACGACGATTCTGTCAAAACAACACTTCTTGGAATATCCCGGCTTA
CAGTGTGGAGGTCAAATCTGTAAGAGATGTTCAACTGGCCATTGCGTTTG
CCAACAAACACAACATTGCTGTTACGATCAAAACATCTGGTCATTCGTAT
GCTGGCTCGAGTATGGGGAAATCTACTTTGCTGATTTGGACGCGCAATCT
CCCTGAACACTTGAAAAGCGTGGACGATGTCAAACAAAACTTCACTGATT
CTTGTGGAACCGTTTTCACTCATGCTGTCAAAGTTGGTGGGGGTCAAAGA
TGGAATAGTGTGTACAAAGCCTTGAATTCAAAATACCATATTGTTGGAGG
TGGTGGATTGACAGTATCTGCAGCAGGTGGCTGGCTTCAAGGATGTGGTT
TATCTGCCATGTCTCGCAAATACGGAATAGGCATTGATAATGTTATTGAC
TTTGATGTTGTTCTTGCAGATGGAAGCCATGTTACTGCAGATAAATGTTC
TAATCCAGATTTGTTTTGGGCGCTAAGAGGCGGAGGTGGTGGTACTTGGG
GTGTTGTTACTGCAGTTCACTACAAAATTCGACCAGCCGAGCCTATTCTT
GAATTTTACATGGAAATTAAGAATATTGGACCCCCTTGGTATTACACAGG
GACTGTAGACTCCTGGTTAGAACAATGGGtgaaactttcaccaaagtTGG
ATAACCGTTGGGGAGGTTATTGGACATTGAACACacttattttgtatttt
cttggTTCTGAAGAAGATGCTAAAACTACTTTCATCAATGATTTCAATGA
ATGGAGAGACAGTTTGCCAGACCTTGAGAAACTAGCTGTCGTGATGAACA
CTAAGATCGCTGACAGCTATTTCAATGTCCGTGGAGGTGATGAAATGACA
ACCGATAAAACTGGACAAGGTACGATCGATATCGCAAGTCGTTTGATTCC
TCGTGATTTTGTTGTGAACGAACCTGATAAAGCTTTGGATCATTTGAAAT
GGATGGTGAGGAACGgatttttcactttcaattaTCTCTTAGGAGGTGTA
GTGATGAATCCTAGCAAAGACGAAACTGCTGTCCATCCTGCAATGAGAAA
AGCTGTTTGGCAAATCGAAACCTTCAATGACAAAATGGCAAATTATCTGC
GAGAAAATATCAAAGACACCGGAGCTGGATTCAACCATGCTTGGGCTAAA
GAACCTGATTGGCGAAATTCTTTATGGGGAGAACAGTTGGAGAAATTGCA
AgagttgaaaaagaaatatgattctGAAAATCGTTTCAACTGTTGGCATT
GTATTGGTTACCAAGGAGATGACTACCCACCACCATCAAGTTCTGCGACG
AACATCTTCCAATCAACTTTCATGGTTGTAATTGTATTTattattaccat
atactacatTTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062_pilon | genome | sc0000062_pilon:506565..508247 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1683:1 |
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