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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000062_pilon:429446..432593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042209 ID=XLOC_042209|Name=XLOC_042209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3148bp|location=Sequence derived from alignment at sc0000062_pilon:429446..432593- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGAGTATCGATACACTGATGATCCGAGGTCTTCGTATTGGAAAGCA
TAATATCTTATTGTTAACTTTTGTCATCTTTTCATGGTTATGTTTGGTAC
AATATGGGGCATGCGCAAAGGTAAATGACTTTTTTAAACGAACATTCTTG
AACCTTGAAGAAATCACAAGAATGGAGAATCACATGTGTCAAATGCCAGC
CTTTCTAACACAAGAATACGTAGGGCCCTTAGAATCTGAAACATTGGAGT
GGTTAGGGAGGACTTTGTAGCTATATTGAAACTATAAAGCTGTACATAAA
AGACTTTTCAAAAGGGCAAACAGACAATACTGGCAAATAAGCGAATTTTC
ATAATAAGACCGCTTCCGATAGAGGTAGCAATTACTTTTTATCAACCTGG
ATCAGAATAAAAACAAGAATCTTTTGCATTTCAGGTCAAATGCCAGAGTG
ATGCAGATTGTTCAAGACAAGGTCTACACGATCATTGTTGCGTTAAAGTG
ACAGAGATGACTGGAGCATGTCATCCCAATTTGAAAAGACAACAAATATG
CCCATGGCCGCCCAACTCTGTCAAGGTGAGTACTGAATGACTTTTGATAA
CCTTTGAAAACCTTTAACCCTAAAAGATTTTAGAAGTGAAGATTAGACAA
AATGAATTTCTTTCGTTCTTGACTAGTTGATAAATTTAGAAAAGTTTTAA
CCATAGAAACTAATCATGGTTCAAGGCTGATTCTTGATTCTAGTCAACTT
AACAGTGACAGGTCAGACGAAACTTTCCAAAATCGGATGCATTTTTTTTG
TAGGTCATGTTTTCACGTCTGCTGTTTTCAATAGCAGATTATGTTTGAAC
ATTCGAAAATTGACTTTGATGTGTTCGTTGCCTTGGTTCCTGTCAAACAC
TTTGCGAATTGCAAATTTCCTTGATTAAAACTGTCATTGAAGGCATCACA
ATTTGCTTTAAATAGTAACTGAAATGGATTTCTATTTAAACTTCAAGTCA
ACTTTTGATACGAGTAAAATTCGACATTGAATTCGACGCTAGATTTCAAT
TTCTCAATCGACAGTACTGTTTACCCTTCATAAAGCTTTGAACCTTGTCA
AAACCTAAAGTCCTGCCCTCAATGAAAAAAAGCAAGGAAATTGTTGGAAT
ATTTTCATGCGATAGTTTGTTTAACTGTACTACCCCTTTTCCTTTTTGAT
GCAATTAAATACGATTTAACCTTGCTGCAACCTTCCCGGAAATCTGACAC
TTGAGGAAATTGTCATTTTTTCATTATTTTATTAAAAGAAAGTCAACAGG
CACTCAAGTATGACACGAGTATTTGCTTCGGGTTGGACGAAGCTTGGGAA
AATCTGTAGTGAGTTCTGCTTGGTTAGAGTTTTTTTAGATTATTGTAAAT
CACAATTAAAGAGTATAAAGTAGGGGGCTTTGATTTATCTGAAAATTGTA
ACATGACAAAGTGAGATACCAACGTGTTGAAAGCACTATTTCTCAGGCCA
TATTTTTTCTTATATTGATACTCTATTTATGTTTTTTTATGTTGAAACTT
TTCGGGGTTGCACGAGACAGGAGATCTTGACAGTTGTGTTGAGGTTCACG
GTTTGAAAGGATGAAATATTTGTAACTAACGCGTTTTGTATCTTGTGGTT
AACAAGACGTCCTTACTGTCTACTGAATACATGATACCTGCTCTCTTGCT
CTCATTTACTACCAATACACCTCTTCATTTGATAAACTAGTCTAGCTTAC
TAGTTTAGCAACCTAGACGACTAATTCAGACATAGTAGAAATAAAGCAAA
AAGTAATGGAGGGAACAATTTTAGTTTATACAAACTAAATTCCGTAACAA
TAATAGTGTATTATCATAACGCCTATACTACTGTATTACACGCATTACAA
ACGACTCCGGTCTACTTTATGAAACTGAAAAAGCGCCATTTTTTTTTGAA
AGGACATTTGAAGATTTTGAGTGTCAATATCAGATCTTAGTGACAGATTT
TCTCCATTTTTATGATAAAACATTAAAACAGAAACAAAAAGCACCAAACT
GAGCAGACAAGCAGCAAGGCAAAAAGCTATCAGACGAATATATTGACAAA
CATACACGTTTTTTAGAAGAACATCCGAAATTTTGAAAGGCTTCGAATGT
TCTTAGTTTTTTGAGTTTTAAACCTTAAAATGTTCTTAAAAGGTTCTTGT
TTTTACCACTTTCTGAGTATTTTTGTGTATTTTCCTAAATATTAGGTGTT
TTAAAGTCTGCAAAGCCTTAAAATGTTCTTAACTTGTTCTTAATATTTTG
GCCATTGAAGCCTTATGTTCTTATATAGTTTGTCATTATAGAAACGTGTA
AAAGAATGGGCAGAGATAAAAATGTCATGGGCTGCAATAGGAAGAAGCTG
ACGTTAATTAATTCTTTTACATTTCTGCAAAGCCTTAAAGTGTTCTTAAA
CTTGTTCTTAATATTTTGGCCATTGAAGCCTTATGTTCTTATATAGTTTG
TCATTATAAAAACGTGTAAAAGAATGGGCAGAGATAAAAATGTCATGGGC
TGCAATAGGGAGAAGCTGACGTTAATTAATTCTTTTACATTTCTGCAAAG
CCTTAAAGTGTTCTTAACTTGTTCTTAATATTTTGGCCATTGAAGCCTTA
TGTTCTCATAGAGTTTGTCATTATAAAAACGTGTAAAAGAATGGGCAGAG
ATAAAAATGTCATGGGCTGCAATAGGAAGAAGCTGACGTTAATTAATTCT
TTTACATTTCTGCAAAGCCTTAAAGTGTTCTTAACTTGTTCTTAATATTT
TGGCCATTGAAGCCTTATGTTCTCATAGAGTTTGTCATTATAAAAACGTG
TAAAAGAATGGGCAGAGATAAAAATGTCATGGGCTACAGTAGGAAGAAGC
TGACGTTAATTAATTATTTTACATTTTTCTGTTCTTATTAGTTCTTGGAA
TTGAAAACAGGCAGTATTGTGCGAAATAAATGTTCATGTGGCATTGGTTT
GACCTGCACCAAAGTTGAACGGAAAAACTGGTCCAAAAAGATGAAAACTT
GGTCCAAACAAAAGATGAGAAAGAAAACACGTTACAAGTATAAATGCAAG
GAAATACACGACGAACCAGACGAGTTCTTCGAGAGACGTGGAAGATGA Coding sequence (CDS) from alignment at sc0000062_pilon:429446..432593- >XLOC_042209 ID=XLOC_042209|Name=XLOC_042209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000062_pilon:429446..432593- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGAGTATCGATACACTGATGATCCGAGGTCTTCGTATTGGAAAGCA
TAATATCTTATTGTTAACTTTTGTCATCTTTTCATGGTTATGTTTGGTAC
AATATGGGGCATGCGCAAAGATGACGAGTATCGATACACTGATGATCCGA
GGTCTTCGTATTGGAAAGCATAATATCTTATTGTTAACTTTTGTCATCTT
TTCATGGTTATGTTTGGTACAATATGGGGCATGCGCAAAGGTCAAATGCC
AGAGTGATGCAGATTGTTCAAGACAAGGTCTACACGATCATTGTTGCGTT
AAAGTGACAGAGATGACTGGAGCATGTCATCCCAATTTGAAAAGACAACA
AATATGCCCATGGCCGCCCAACTCTGTCAAGGTCAAATGCCAGAGTGATG
CAGATTGTTCAAGACAAGGTCTACACGATCATTGTTGCGTTAAAGTGACA
GAGATGACTGGAGCATGTCATCCCAATTTGAAAAGACAACAAATATGCCC
ATGGCCGCCCAACTCTGTCAAGTTCTTGGAATTGAAAACAGGCAGTATTG
TGCGAAATAAATGTTCATGTGGCATTGGTTTGACCTGCACCAAAGTTGAA
CGGAAAAACTGGTCCAAAAAGATGAAAACTTGGTCCAAACAAAAGATGAG
AAAGAAAACACGTTACAAGTATAAATGCAAGGAAATACACGACGAACCAG
ACGAGTTCTTCGAGAGACGTGGAAGATGATTCTTGGAATTGAAAACAGGC
AGTATTGTGCGAAATAAATGTTCATGTGGCATTGGTTTGACCTGCACCAA
AGTTGAACGGAAAAACTGGTCCAAAAAGATGAAAACTTGGTCCAAACAAA
AGATGAGAAAGAAAACACGTTACAAGTATAAATGCAAGGAAATACACGAC
GAACCAGACGAGTTCTTCGAGAGACGTGGAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062_pilon | genome | sc0000062_pilon:429446..432593 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 262-468:208 |
| Aaloc | 121-261:2715 |
| Aaloc | 1-120:3149 |
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