XLOC_042188 (mRNA) -

Overview
NameXLOC_042188
Unique NameXLOC_042188
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000062_pilon:423415..424265+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042188 ID=XLOC_042188|Name=XLOC_042188|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=851bp|location=Sequence derived from alignment at sc0000062_pilon:423415..424265+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAACCAAGCAGCGAAACACCTTTATTGATATCGATTTTTGCAAT GCTGGCGACACTGGACATTGTTGCGTCTTTAGCGGGTCCTCTGCAACATG GCAATGGACAGTCTGGCAAAACTGTCGTCATACAAACTACACAACCACGC ATCACGACGCCCAAAACGGTAAGCTTTTCTTCTATTTTCACATGTTAGTT GAACTTTCTTAACTTGAATACTATAATAGTCGACTCTTCCTAGTTCGAGC TTCAAGGTGCCAAAAATGTCTTTGAACAAGAGAGGGAAAAtctcgaatta cagagaatattcgaattatggaggtttaattagagagagttgaacGTAAT AGTCAATGGCAACTTTGGTTGGTCTAATCTGTGGATATAAAGAATGAAAT AATTGATCTCTCTTCACAAAAGAACTATCGAGGTTGGAGATATCCAGTGA AAGGAGTGACCCTGCCCCCTACCCCTTCCGTCATGAAGCTTGTATCAAAT TTTCTGTCACTCGCAAtagataatttcaattttattttttagattttatc aaGTTTCGAAAAATTATGTGCAAATCAACCCGAATGGTGTCGAAAACGAA TGTTAAACAACAAACTGAGAATGAAGCATTCATCCGACCAACGATCAAGG AGACATTTGTTGACCAGTCAATACATTTTATCACACAAACGCAGAACTCA ATCATCCTCTACGGTGGACAGGAAACCCCAACGCAATATCAACCAAAAAT TACAAAGATTAGCAACGATGCAAAGGACTTATGACTATATTAGGGAGAGC AATAAAATCATAAAACGTCTTCAAAAGTTCGTCAAGAAGGAATTCAGTTG A

Coding sequence (CDS) from alignment at sc0000062_pilon:423415..424265+

>XLOC_042188 ID=XLOC_042188|Name=XLOC_042188|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000062_pilon:423415..424265+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAACCAAGCAGCGAAACACCTTTATTGATATCGATTTTTGCAAT
GCTGGCGACACTGGACATTGTTGCGTCTTTAGCGGGTCCTCTGCAACATG
GCAATGGACAGTCTGGCAAAACTGTCGTCATACAAACTACACAACCACGC
ATCACGACGCCCAAAACGATGCAGAAACCAAGCAGCGAAACACCTTTATT
GATATCGATTTTTGCAATGCTGGCGACACTGGACATTGTTGCGTCTTTAG
CGGGTCCTCTGCAACATGGCAATGGACAGTCTGGCAAAACTGTCGTCATA
CAAACTACACAACCACGCATCACGACGCCCAAAACGattttatcaaGTTT
CGAAAAATTATGTGCAAATCAACCCGAATGGTGTCGAAAACGAATGTTAA
ACAACAAACTGAGAATGAAGCATTCATCCGACCAACGATCAAGGAGACAT
TTGTTGACCAGTCAATACATTTTATCACACAAACGCAGAACTCAATCATC
CTCTACGGTGGACAGGAAACCCCAACGCAATATCAACCAAAAATTACAAA
GATTAGCAACGATGCAAAGGACTTATGACTATATTAGGGAGAGCAATAAA
ATCATAAAACGTCTTCAAAAGTTCGTCAAGAAGGAATTCAGTTGAatttt
atcaaGTTTCGAAAAATTATGTGCAAATCAACCCGAATGGTGTCGAAAAC
GAATGTTAAACAACAAACTGAGAATGAAGCATTCATCCGACCAACGATCA
AGGAGACATTTGTTGACCAGTCAATACATTTTATCACACAAACGCAGAAC
TCAATCATCCTCTACGGTGGACAGGAAACCCCAACGCAATATCAACCAAA
AATTACAAAGATTAGCAACGATGCAAAGGACTTATGACTATATTAGGGAG
AGCAATAAAATCATAAAACGTCTTCAAAAGTTCGTCAAGAAGGAATTCAG
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042188XLOC_042188-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062_pilongenomesc0000062_pilon:423415..424265 +
Properties
Property NameValue
Aaloc169-477:543
Aaloc1-168:1