|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000062_pilon:338381..339766+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042186 ID=XLOC_042186|Name=XLOC_042186|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1386bp|location=Sequence derived from alignment at sc0000062_pilon:338381..339766+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaacaacaacaatccaaaaaggttgacaacaaagTCACCATCCGACG
AAAAGATAAACATGTTCCAATTCTGATAGAGGAATTGATCGATTACTACG
GCTTCGGTAAACACACCATCAAAATGGTCTTTCTTTTGAGTTGCGTTTGT
TTCGCATACGGAGCTCTTACTAACATTCTTGCCAACGTTATCTTAATCAA
TTGGGCGTGTGAACCGGGCGATCGGGCGGATGAACCGCAACTCGTATGGG
CAACTTTATGTATTGGTTTGGCCCTTGGATCGTTTTACTTTGGCTGGTTG
GCGGATCGGTACGGGCGTAAATTAATGATTGCAGTTACGACCACACTCAG
TTTATATTTCACACTACTTTTATGTGCTTCTGAAAGTCATTTCGATGctt
tattaattttatttttcacagcGTCTGGCTTGAGTGGCGGAAGAATCATA
TCAAACTATTCTGCAGAATCGTTCCCTGTCAAACACCGAGCTAGAATACA
AACCGTTTTAGGATTATCATCTAGCCTTGGTTCAGTTGTTTATTCGTATC
TAGCCTATACTCAGAGACTGGGCTGGCGTCATTTCACCCTTACAGCAAGT
GCACCgttgattgtttttattgttatacCGTTTTGGCTACCCGAATCTAT
ACCGTATTTACAAATGACCGGAAATGAAGACGAACTATACAGAGTGTTCC
AACATTTAGCAGAAAGTCATGGAAAGAATTTAAAACGAAGAACTTTATTA
ACAGCGAGAACCATCAAAAATAGAGGCAATCTCCCGACCTTGTTTTCAAA
ATCTACAATTTGTGGAACTTTGATCGTTATGTTGCTATGGGCAACGAGTC
GTTTATCCATGAGTGTTTCGACTGTGCTTCATTACAACACTATAGTGTTT
AACAAGACAACATGTCCAGAAAACCAAGTAGATATTCTACAAAGCTTGTC
ATTCAAAGAAGTACTCAACTGCAAACACAGTTCAGATGTCTTTTACGTTT
CGTTTATTGGCTCTCTTGCAGAATCAATTGGTCTCGcaatcacttttatt
tttatcaatcaTGTCAGTCGAAGATTTGCTTTTATATGCTTGTTACTCAT
CAATTCGGCGGGATTTATTGCTATGAATATTTGCAGTGTAGCGACCATTC
ATACAGCTCTGGTTTTAATAACTATGGCAACAAGTGCTAGTTTCTTTCAA
GTACTTTGTATTTTCACCAACGAATTTTACCATGCTTCAGTTCGTTGCAC
TGCAACTGGGATGTTCAATTTTATATCTTTATTAGCCTTGGTTTTGATCC
CGATTTTGATTAGCCTGAGTTTTGCATTGACTCCGATTGTAGTGACAGTG
TTTTTTGTATCCTTTGCTGTACTTTGTTGTTTTGGA Coding sequence (CDS) from alignment at sc0000062_pilon:338381..339766+ >XLOC_042186 ID=XLOC_042186|Name=XLOC_042186|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2772bp|location=Sequence derived from alignment at sc0000062_pilon:338381..339766+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaacaacaacaatccaaaaaggttgacaacaaagTCACCATCCGACG
AAAAGATAAACATGTTCCAATTCTGATAGAGGAATTGATCGATTACTACG
GCTTCGGTAAACACACCATCAAAATGGTCTTTCTTTTGAGTTGCGTTTGT
TTCGCATACGGAGCTCTTACTAACATTCTTGCCAACGTTATCTTAATCAA
TTGGGCGTGTGAACCGGGCGATCGGGCGGATGAACCGCAACTCGTATGGG
CAACTTTATGTATTGGTTTGGCCCTTGGATCGTTTTACTTTGGCTGGTTG
GCGGATCGGTACGGGCGTAAATTAATGATTGCAGTTACGACCACACTCAG
TTTATATTTCACACTACTTTTATGTGCTTCTGAAAGTCATTTCGATGctt
tattaattttatttttcacagcGTCTGGCTTGAGTGGCGGAAGAATCATA
TCAAACTATTCTGCAGAATCGTTCCCTGTCAAACACCGAGCTAGAATACA
AACCGTTTTAGGATTATCATCTAGCCTTGGTTCAGTTGTTTATTCGTATC
TAGCCTATACTCAGAGACTGGGCTGGCGTCATTTCACCCTTACAGCAAGT
GCACCgttgattgtttttattgttatacCGTTTTGGCTACCCGAATCTAT
ACCGTATTTACAAATGACCGGAAATGAAGACGAACTATACAGAGTGTTCC
AACATTTAGCAGAAAGTCATGGAAAGAATTTAAAACGAAGAACTTTATTA
ACAGCGAGAACCATCAAAAATAGAGGCAATCTCCCGACCTTGTTTTCAAA
ATCTACAATTTGTGGAACTTTGATCGTTATGTTGCTATGGGCAACGAGTC
GTTTATCCATGAGTGTTTCGACTGTGCTTCATTACAACACTATAGTGTTT
AACAAGACAACATGTCCAGAAAACCAAGTAGATATTCTACAAAGCTTGTC
ATTCAAAGAAGTACTCAACTGCAAACACAGTTCAGATGTCTTTTACGTTT
CGTTTATTGGCTCTCTTGCAGAATCAATTGGTCTCGcaatcacttttatt
tttatcaatcaTGTCAGTCGAAGATTTGCTTTTATATGCTTGTTACTCAT
CAATTCGGCGGGATTTATTGCTATGAATATTTGCAGTGTAGCGACCATTC
ATACAGCTCTGGTTTTAATAACTATGGCAACAAGTGCTAGTTTCTTTCAA
GTACTTTGTATTTTCACCAACGAATTTTACCATGCTTCAGTTCGTTGCAC
TGCAACTGGGATGTTCAATTTTATATCTTTATTAGCCTTGGTTTTGATCC
CGATTTTGATTAGCCTGAGTTTTGCATTGACTCCGATTGTAGTGACAGTG
TTTTTTGTATCCTTTGCTGTACTTTGTTGTTTTGGAatgaaacaacaaca
atccaaaaaggttgacaacaaagTCACCATCCGACGAAAAGATAAACATG
TTCCAATTCTGATAGAGGAATTGATCGATTACTACGGCTTCGGTAAACAC
ACCATCAAAATGGTCTTTCTTTTGAGTTGCGTTTGTTTCGCATACGGAGC
TCTTACTAACATTCTTGCCAACGTTATCTTAATCAATTGGGCGTGTGAAC
CGGGCGATCGGGCGGATGAACCGCAACTCGTATGGGCAACTTTATGTATT
GGTTTGGCCCTTGGATCGTTTTACTTTGGCTGGTTGGCGGATCGGTACGG
GCGTAAATTAATGATTGCAGTTACGACCACACTCAGTTTATATTTCACAC
TACTTTTATGTGCTTCTGAAAGTCATTTCGATGctttattaattttattt
ttcacagcGTCTGGCTTGAGTGGCGGAAGAATCATATCAAACTATTCTGC
AGAATCGTTCCCTGTCAAACACCGAGCTAGAATACAAACCGTTTTAGGAT
TATCATCTAGCCTTGGTTCAGTTGTTTATTCGTATCTAGCCTATACTCAG
AGACTGGGCTGGCGTCATTTCACCCTTACAGCAAGTGCACCgttgattgt
ttttattgttatacCGTTTTGGCTACCCGAATCTATACCGTATTTACAAA
TGACCGGAAATGAAGACGAACTATACAGAGTGTTCCAACATTTAGCAGAA
AGTCATGGAAAGAATTTAAAACGAAGAACTTTATTAACAGCGAGAACCAT
CAAAAATAGAGGCAATCTCCCGACCTTGTTTTCAAAATCTACAATTTGTG
GAACTTTGATCGTTATGTTGCTATGGGCAACGAGTCGTTTATCCATGAGT
GTTTCGACTGTGCTTCATTACAACACTATAGTGTTTAACAAGACAACATG
TCCAGAAAACCAAGTAGATATTCTACAAAGCTTGTCATTCAAAGAAGTAC
TCAACTGCAAACACAGTTCAGATGTCTTTTACGTTTCGTTTATTGGCTCT
CTTGCAGAATCAATTGGTCTCGcaatcacttttatttttatcaatcaTGT
CAGTCGAAGATTTGCTTTTATATGCTTGTTACTCATCAATTCGGCGGGAT
TTATTGCTATGAATATTTGCAGTGTAGCGACCATTCATACAGCTCTGGTT
TTAATAACTATGGCAACAAGTGCTAGTTTCTTTCAAGTACTTTGTATTTT
CACCAACGAATTTTACCATGCTTCAGTTCGTTGCACTGCAACTGGGATGT
TCAATTTTATATCTTTATTAGCCTTGGTTTTGATCCCGATTTTGATTAGC
CTGAGTTTTGCATTGACTCCGATTGTAGTGACAGTGTTTTTTGTATCCTT
TGCTGTACTTTGTTGTTTTGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062_pilon | genome | sc0000062_pilon:338381..339766 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1386:1 |
|
