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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000040_pilon:1948289..1951792+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042155 ID=XLOC_042155|Name=XLOC_042155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3504bp|location=Sequence derived from alignment at sc0000040_pilon:1948289..1951792+ (Clytia hemisphaerica_ch_hm2_pilon)
atggttaATAGCAAACAGCGCCTCTCCCTTCATGAATATTATATATTGGT
GAAAAGGACCATTCTTGATTTCCAggtattatgttttttttttgtttttt
ttaagaatagtTATTGTTTTTTACATTTCCTAATTCATACCAGACTATGT
GACAAAAAATTATACGTTTTGATAATTGTTGTTATACAGGaaactctttt
ttctttcaattttgataattcGATAAACATAAATGCTTTCAGATGCTTCA
ACTTGGTTTCTATAATGATCATCTGAGCAATTTCAATTGATCAGCCAGAC
GGCACAAATCTTTGTATTActttcatttaaatttttagcataaaaaagGC
TGAATATCGTAAGAAAAATGACATCATTCAATTAACATATTATTAGCTAA
CAGAAAATTTGtaagaaaagttatttttttagaTCATAATCTGtacatgt
tttttgttttgttttaagaaTCCAATTACTGGGCTCCTTCCACCAAGTTT
ATTTCATGGAAAGTTCAATGAAACGACCAACAGACATTCATGGGTCAGAG
ATAATGTTTACAGCATTCTAGCTGTATGGGCTTTGTCAAGGGCATACAAA
AAGAAGACTGATTTTGATGCAGAGAAATCCAAACAATATGAGCTAGAGCA
GGTATTTTACAACCTCGTTCCCTTGTATTATTGGCTTACTGGTTGCACCA
GATAATATTAGTTACTCGGCAAGCCTCGACcccaatacggtttttactaa
ccctgtatatcccgtatcccacctcaaAACGACCTTGCGGATTTATATCG
TTGAAGTCCCTTTTCAAGTTTCCCAAGAGCATGATAAAAACTAACAGAAC
TCTCTTAGTAGATACTTACATCAAAGAGCGAACTGTGAAAGTGacattcg
aaagcgcattcgtcaatacgcaatgtcttctttttttctcaatcgaacgt
gAGGAAGACAGATACGGTATATATCCCACCTCTATGTGATGTCTTTTAAC
CAATGAATTCGCTAGAATTTTAGGCAGGATGATTAACTGTTGACTTCTTT
GAGGGTGTGTGTTGATATCAAATAAATTAATCCAATattaccttttttga
aaagtgttcACAAAAGTTAATAACAAGCTATTTTGATAGTTTCATTCAGT
TTAACTATTGTTTGCCTTCATAGTGGTCCAATAAGGTCTACTTAACTGCT
ATTAAAAGTACTATTTAcgttaaataataaaaaataacaatctACAATCC
ATTTTCAGAGTGTTGTCAAGTTGATGAGAGGCTTATTAATGAGTATGATG
CAGCAGGTACGCTATTTCTTTGTACTTaaagaataaaatgattttcACAA
AGAACTTTATTAACCCTAGGTTATGTCATGTCTAACTCTGTTTGAAGCCT
AAAGCTCTTCTTCTCTATGAGCTGAGAGCTGCCTAATATGTTAGACTATA
GACTATTTTAGCCGTAGTATGCATGgtttaaaaagctttttgctGGTAAA
AGCAATGAATGTACTATTCAGAATTAGAATGCTGGTACAGTTAGGAATTG
TTTACAAGAACCCTCATTTTTGGTATTATTTTTGTTACAGAGtgcaaaag
ttgaaaattttaagagaTCCCAGCAAAAAGAAGATTCACTTCACGCTAAA
TACAGTTATGGTATGATTTTATGTTCGTCATTGATGAATTTGTAACTCCT
AACCAATAGTAGGAAAACATAGTGTTCTCCTAGGTCAGCCGCTCAGAGGG
AAATATTATCGCCaggttttgaaaataattctttcccccctcccccAAAA
GTAACAAGATTTTTGATCTCCCgttcctttttttttactttccctaattt
tgaaaactgtcACTGCCACTTGCTCTTCTGAAAGTagtgtttttcaaaac
aatcaacaaaatatgaactaatgaagaaaaaaaaaagattttgaagcgTT
GTCAAAGTATATCATATTTGTTTCTTAACCGTGTGTTTTATAACTTAATA
TACTGAAATGTAATGagtaaaaaaagcaaaataatgcgatagaaaaatta
aagattaaaaagttaagaatttcaCCACTTTTCGGGAATCCCAACCacac
atttttggacctaccccggtgggatggaggtcctataaattaacctttgt
ccgttcgtccgttcgttcgttcgttattagcttttatcgagattggctct
ttgattctttatgattttttgcacaaagatgcataactataaaccctcga
atgtgacggagcccagcGGAGCCCGACTTTCAAAAAGaaggggcaaattt
gggccaaaaaacggctaaaaacaggttttttgaactttgtgaaaaattgg
atcattaactttttctgattttttgcatgaaagtagggtaccatccaGTA
CATCATAGGTAAGagatggctcaagtagattttttcaaaaaaattttgtt
ggcttaaaaaacgcatgtttatctataagaatcactattaataagcatac
atcaatgttcttagccaaattactcaattttttgatgagatagatgtttt
attGCTCACAAGGTCTTGAATATGatagaatatttcaagagcatgatatt
ttggtttctaaacgttttttttataagaaacaaacgactaaagTTTTCCA
TAAGGAAACTATCTATAAGATGCTATCAGAAACATATTTTGAATTTCCTT
TGCCAAATACTTCAGGTTAGAGTTGAAAGCCTTGAAGTCACAATTTTTCC
ATTgtcataaacattttttttaatacacttgttttgaattacttttttat
tcaagaAGAAGAAATAATCAAGGTAACAAAACCAAAATGGGCCCTGGTGG
CCAAGCAATTCTACAAttccttttttcaaattttacagcCCATTCATTAA
AAGCCAAAAAACATGACAATGAAGAgctaagtttgaaaaaaaaacaaaag
cctTCGCAAACCACTAGATGGAAATTCTTGGTATTAGCAGATTCTCATAC
ATTTCTGCAAAAAAGTaccctttttttttaaacttctgGACTAGATTCAA
GATCTCTCATGTAGACATGTATTGATATTCGAAAAACATATTCGTCTCTA
CAGCATCTGCTTCCATTACCATGAAAAGGTTGAAAGATTTGTAAAGATAC
AAATTGTGGTTGCAAAGCATGCCATTTGAGAGcccccccccAGCAGACCT
TTAATTCACAcaatcacgcatttttttcGACTTTCACACATTCctgcaat
ttttttcgaaattcttgCAATTTCTATTTACGCGAAGTTTTCCTTTTCAC
ATATTACGcagctttttaaaaatattaacccTTTCATGCAAAAGAAAAAG
CCCATTCAGGCATTCATGCAAGCCACTGGGGGCATTTAAATCACATTCTT
AATTCCCTGCAAACATTTTGTTTTCTTAGATTCTGGTAAGACAGTGGTTG
ATGACACAGGATGGGGTCATTTACAAATTGACGCCACTTCTCTCTATCTC
CTAA Coding sequence (CDS) from alignment at sc0000040_pilon:1948289..1951792+ >XLOC_042155 ID=XLOC_042155|Name=XLOC_042155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000040_pilon:1948289..1951792+ (Clytia hemisphaerica_ch_hm2_pilon)
atggttaATAGCAAACAGCGCCTCTCCCTTCATGAATATTATATATTGGT
GAAAAGGACCATTCTTGATTTCCAgatggttaATAGCAAACAGCGCCTCT
CCCTTCATGAATATTATATATTGGTGAAAAGGACCATTCTTGATTTCCAg
aaTCCAATTACTGGGCTCCTTCCACCAAGTTTATTTCATGGAAAGTTCAA
TGAAACGACCAACAGACATTCATGGGTCAGAGATAATGTTTACAGCATTC
TAGCTGTATGGGCTTTGTCAAGGGCATACAAAAAGAAGACTGATTTTGAT
GCAGAGAAATCCAAACAATATGAGCTAGAGCAGaaTCCAATTACTGGGCT
CCTTCCACCAAGTTTATTTCATGGAAAGTTCAATGAAACGACCAACAGAC
ATTCATGGGTCAGAGATAATGTTTACAGCATTCTAGCTGTATGGGCTTTG
TCAAGGGCATACAAAAAGAAGACTGATTTTGATGCAGAGAAATCCAAACA
ATATGAGCTAGAGCAGAGTGTTGTCAAGTTGATGAGAGGCTTATTAATGA
GTATGATGCAGCAGAGTGTTGTCAAGTTGATGAGAGGCTTATTAATGAGT
ATGATGCAGCAGATTCTGGTAAGACAGTGGTTGATGACACAGGATGGGGT
CATTTACAAATTGACGCCACTTCTCTCTATCTCCTAAATTCTGGTAAGAC
AGTGGTTGATGACACAGGATGGGGTCATTTACAAATTGACGCCACTTCTC
TCTATCTCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000040_pilon | genome | sc0000040_pilon:1948289..1951792 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 307-381:3430 |
| Aaloc | 259-306:1259 |
| Aaloc | 76-258:469 |
| Aaloc | 1-75:1 |
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