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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:256203..257858+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042142 ID=XLOC_042142|Name=XLOC_042142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1656bp|location=Sequence derived from alignment at sc0000133_pilon:256203..257858+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCAGATTTCATTGATGTGAAACGTAAgcatgtaaaattttaatgaaa
gcttttcaaaagtgttttcagttGATTCCACAAAGCTTGGTAACCATACC
GTATTCCCTCTAAATAAGGCTACCATTTTTATCATTtccatttcattttc
agtacCTGAATTCACCAGCAATCCAACATCTTCTGGTGGTCGACAGTTTT
ATGTCGGTGATTTGATCTTCATCAGTGGTTGTGAAGTCCAATCAATGTTC
ACACAGCCCTTATCCTTCTTTGTGCTCTACGATCCACTATCTGCATCTAA
CCTTCAACCTATCCAGCAGATGATCACATCCAATTCTTTCAATGAAACAA
CTGgtctcttcactttcactttcaacgAGTACGTCATTGCTTCGGGAAAG
ATGAGTAATACAGGTTTCTATGCGTGTCAAGTGTCCTTCGTTACAGCTCA
ATCACCAGAGAGTTTGACCATTAGATCTGAGTCCATTGATATAATTATCT
CATGTAAGTGATTATAGTTTCTATTTATTTCGTcttttgctttcattttc
atcGGAATTTTACTAATGTTCCATATCCTGAAAATAAAGCAATCGTACAC
CATATCAACCGAACAATGAGGTTTGGGTATGAGTTTACCGAAGGTTAAAT
TGGCGTCAATTGTTTTGTTATGTTAGTGTTCAGTTTCCTCACTCAATCAT
AATAATgttaaacttaaattttaatgTAGCTTTTGACGCAAGGGGTGACA
GGTGCATTGTATTGTATTTTATGATTCATTTCTCTAAATCCGATTTTTAA
CATTCTTGTTTAGCTAATAATGTCGTATTCGCTTCAAACCCTACATTGGT
TATCCGACCCGATTCGGTCAGCATTGCTGGTTGTTCATACACTGCTGACA
GACCTGGCAACCTCACCAAATATTCAAGGTGGTTGTATAATGGTTTAGTA
TCGAACAGTTTAGATACTGGAAACCTCTCTGGTAAGTTTAAGGACATCGA
CATCACTTCATATGTTTCGTGGGGAAATTACATGTGCCAAGTCAAAATTG
GTACTGAGATTTTTAACTCATCAACATTGACCGTGGACGAATTCCCAGGT
AatgacgttttttttttatctatataaaACTATTTTCGTCTTcgtgattt
tgaaaaaatgattaagCTTCAGCATTGTCTATCGATAGAATAAACATGAT
TTTGTTTTGTGTGTAAAATCTTTTAACGGGAGTAATTGAAGTTATTTCCC
ATTAAgaatcaaaaaaatgttatttgtgTAGAAGCTCCGAAATAAGACTT
CCGGCATGTTATAGATATGAGACCTGTACATTAATTATGTTTTCTATCAC
GCAGATCCAACCATAACAATCCAGCCAACTGCAAAATACAACGATTCCAT
TGGAAGTCCTATCAACATCACCGGTTGTCGTATTTCCAGCATCTTACAAA
TGCAAAGCAATAATTTATACTGGTTGGTCAACTCCATTGAAAAACGAACa
gcttttctttcttttgataagaACAATGCTCAATTTGCGTCTTTGGCAAT
GGCTTCATCCACCATCAACGATCAAGGTTTTTACCAATGCGCTTTCTTGA
AACCTGGCAAAGCTAAAAAGTTGGTTCTGTCCAACAGTGCTAATGTCCAG
TTTAAA Coding sequence (CDS) from alignment at sc0000133_pilon:256203..257858+ >XLOC_042142 ID=XLOC_042142|Name=XLOC_042142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000133_pilon:256203..257858+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCAGATTTCATTGATGTGAAACGTGTCAGATTTCATTGATGTGAAAC
tacCTGAATTCACCAGCAATCCAACATCTTCTGGTGGTCGACAGTTTTAT
GTCGGTGATTTGATCTTCATCAGTGGTTGTGAAGTCCAATCAATGTTCAC
ACAGCCCTTATCCTTCTTTGTGCTCTACGATCCACTATCTGCATCTAACC
TTCAACCTATCCAGCAGATGATCACATCCAATTCTTTCAATGAAACAACT
GgtctcttcactttcactttcaacgAGTACGTCATTGCTTCGGGAAAGAT
GAGTAATACAGGTTTCTATGCGTGTCAAGTGTCCTTCGTTACAGCTCAAT
CACCAGAGAGTTTGACCATTAGATCTGAGTCCATTGATATAATTATCTCA
TtacCTGAATTCACCAGCAATCCAACATCTTCTGGTGGTCGACAGTTTTA
TGTCGGTGATTTGATCTTCATCAGTGGTTGTGAAGTCCAATCAATGTTCA
CACAGCCCTTATCCTTCTTTGTGCTCTACGATCCACTATCTGCATCTAAC
CTTCAACCTATCCAGCAGATGATCACATCCAATTCTTTCAATGAAACAAC
TGgtctcttcactttcactttcaacgAGTACGTCATTGCTTCGGGAAAGA
TGAGTAATACAGGTTTCTATGCGTGTCAAGTGTCCTTCGTTACAGCTCAA
TCACCAGAGAGTTTGACCATTAGATCTGAGTCCATTGATATAATTATCTC
ATCTAATAATGTCGTATTCGCTTCAAACCCTACATTGGTTATCCGACCCG
ATTCGGTCAGCATTGCTGGTTGTTCATACACTGCTGACAGACCTGGCAAC
CTCACCAAATATTCAAGGTGGTTGTATAATGGTTTAGTATCGAACAGTTT
AGATACTGGAAACCTCTCTGGTAAGTTTAAGGACATCGACATCACTTCAT
ATGTTTCGTGGGGAAATTACATGTGCCAAGTCAAAATTGGTACTGAGATT
TTTAACTCATCAACATTGACCGTGGACGAATTCCCAGCTAATAATGTCGT
ATTCGCTTCAAACCCTACATTGGTTATCCGACCCGATTCGGTCAGCATTG
CTGGTTGTTCATACACTGCTGACAGACCTGGCAACCTCACCAAATATTCA
AGGTGGTTGTATAATGGTTTAGTATCGAACAGTTTAGATACTGGAAACCT
CTCTGGTAAGTTTAAGGACATCGACATCACTTCATATGTTTCGTGGGGAA
ATTACATGTGCCAAGTCAAAATTGGTACTGAGATTTTTAACTCATCAACA
TTGACCGTGGACGAATTCCCAGATCCAACCATAACAATCCAGCCAACTGC
AAAATACAACGATTCCATTGGAAGTCCTATCAACATCACCGGTTGTCGTA
TTTCCAGCATCTTACAAATGCAAAGCAATAATTTATACTGGTTGGTCAAC
TCCATTGAAAAACGAACagcttttctttcttttgataagaACAATGCTCA
ATTTGCGTCTTTGGCAATGGCTTCATCCACCATCAACGATCAAGGTTTTT
ACCAATGCGCTTTCTTGAAACCTGGCAAAGCTAAAAAGTTGGTTCTGTCC
AACAGTGCTAATGTCCAGTTTAAAATCCAACCATAACAATCCAGCCAACT
GCAAAATACAACGATTCCATTGGAAGTCCTATCAACATCACCGGTTGTCG
TATTTCCAGCATCTTACAAATGCAAAGCAATAATTTATACTGGTTGGTCA
ACTCCATTGAAAAACGAACagcttttctttcttttgataagaACAATGCT
CAATTTGCGTCTTTGGCAATGGCTTCATCCACCATCAACGATCAAGGTTT
TTACCAATGCGCTTTCTTGAAACCTGGCAAAGCTAAAAAGTTGGTTCTGT
CCAACAGTGCTAATGTCCAGTTTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:256203..257858 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 667-966:1357 |
| Aaloc | 382-663:816 |
| Aaloc | 343-378:467 |
| Aaloc | 28-339:155 |
| Aaloc | 1-24:1 |
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