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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:259660..264616+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042141 ID=XLOC_042141|Name=XLOC_042141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4957bp|location=Sequence derived from alignment at sc0000133_pilon:259660..264616+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGTGACACAAGTGGATCGGAAGTCTTTCTGTTCGTCAGGTGATTCCCT
GATCTCAAACCTACAAGGAATCACCACTCTCGGAATCAATAACATCAAAA
CGATAACTCAAGGTAAGACGTTATGATATTTGTCCTCTCAGTGTTCAGAA
AATTCCCTCTAAAGAATTCCCCGGTAAATCTGCCAATAAGTTATCGGAGA
ACTATAATTTCATTCTAGCAATTAATTGGGATTAGATTAGATTCAATGTT
GGTAAGCTACCTTTAGATAATAAATATTGATAACGAGATGTCTAAGTTGT
TCCAGATCGCGAAGGATTCTAGATAAAACGACATGTGAAGCTAGCTCATA
TATAGTAAACTATCGATCAAACACTAATATACGCAAATAATTGGTCCTTT
ATTAGATTGTTGTCCAGCAGACACAGTTGGCGAGGAATCATTCAAAGGAG
TTTACAATTATAACGTCACTCTAGTCAACACAGACGTCCGCCAAACTTGT
GTTTACTCAGCGTCTTCGTTAAGCGCACGACAATGCATCCAAAACTTGGA
GCTTGGTCCTCAATGGGGTGAAGCAGATCTTGGACAATGCTCTGCTAAAA
GTGATGTAACAAATCAACTCATTGAGCTGACAAAGGTATATATTGCCTTT
TTCATATAGCAGTACTATTTTGTATCCGCgtatttttttttggtgaaatt
atcaaacattttaagattttattgaTGACTAGCTTAACATTTTCAGTGCC
TAAGTGGATTTTCTCATGTAACATCCATTTTCGCCAATCTTTATTTTCCT
GGACTTCATTTCTTGGTTATTACTTATCGATTCTGTTATAGGAATTGACT
TGTACAACGGGCAACTGTACGCTAAACGTTGTGAAAGTGACAGAGAATCT
TCGTGAGATTGTCAACAACAATACAGCTATCACAACCAGACAGGATCTTG
AATTCATCGCTGACATTGTTGGCAATACTGCAGACTCCAACACAACTAGC
AGTGAAACTAAACTGGTAATTTACACCATTCGTCATTCATTAGCAAAAGA
CAGGCTCAGCGtttttttACCACTTACCACAATTAACCTTTCACGCAAAC
CCCTCACTTGATCTAACGTTGTTGTAAAAAGATGACGATagatgatagaa
tgatagaaaaTAATGATACAAACCAGAAAAGCGTCCGAAAAAAGTGTTCG
CCGTAATGTATTATCATGTCTTCTAAATTTTCTTCCTACGCGCTAGAGCT
CTGAAGGTTGGGAAATTTTCAATATCTTGAAGGGATTACATTATAGAATT
TTACCAGACTGCATCAAGAATTTGTGGGGTGTGGGAAGCCTAAACTGGGG
ATTTGGGATTGTCGGGTCCAACCAAAATAATCTCAGCCTTACGCAGAAGG
GGATCCCGATTGAtcccgactggggatgcggcacataGGAGGCCGACGAT
CATTCTTCGCGAATGGAAGATTGAACCGCTTCTTCAGAGTTTTAGCGCGG
GCGGCCATCAATCCACCATTGGATTATCAGAAAATCGTTGATCTAAGTGT
CAAGCTTCTTCCTAACGAATGATAAGTGAATAAGGTTAAGgttatgattt
aaaaaaatgaaaaatgaccttattttcggttttgttttaaaagggTGCTG
AAAACATTATGAAGACTGTTGATGTGGTAGTAGTCTCTGATAAAAGTATC
ATTGCAGAATCGGAAGAAAAGACTCAATCGTCCACAAAACTTGTCAAAAA
CTTAGAAAAGTTGACATCAGCCATCGGTAAAGTTGTGGAGGAAACTAAAG
AACCATTCTCAGTGACTGGTGAAAATACAGCTCTGATTGTCAACTTTGAG
CCTCCTAAAGCGCTGACACTTATTGCAAGAGATCTTACATCCTCTGACAA
tcaaaatgagataaacatTGCTATCATGAACAGCACCACATCGCCACCaa
aaaaaCGACCATCATTGGTTAGAGCTGAAATCCCTGCCGAAGCTTTTGGT
AACAAGAGTCAAGCAGTGTCGTCACTTATCTTCAGAGAAAACACCTTGCT
ACAGGAAACCAATAACACCAACCCAGTGATCAGCTCAGTATTAAGCATCA
GTGTTGGTGATCAACCAGTATCTAATCTCACAACACCATTGATTCTTCGC
TTCCAACGAACAACTCCTAATGAAACATTGGATGGAACAGATCTTTGCTC
CTTTTGGGATTTCTCAGCTCGTAAGTTCATGTTTAATGGTGAAAGTAGTG
AAGAAGAGAGTATCTAGTCCAATTGTCCAAAATGACTATacaactctcgc
taattcgaactttgaTTTGTTCGAAATGCAgggagattcgaataatagaa
gttcgaattagagagagtgataAATTATCTTAAAACGATGAACATATTGC
ACCCATTTCCATGATATAGTTTTATTGGGATTTCACATTTTATTTGAGCC
AAAAGGTGATTAAACCTTAGCTAAGTAAGCCCCAAACTTAGCTTAGGTAT
CATGATTAACACTGTGATTAATACTAATTCGAATCATTTACTCCTCATTA
CCCATTTCTAGCGACCGGAGAGGCAGGTCGTTTTGGTCGTTGGAGCACGG
ATGGATGTCGGCTGATAGCCAATCAAACCACAGCAACTGATGTCGTTTGT
GAATGTGATCACATGACCAACTTCGCCATCCTTTTTGACGTTTCACAGAC
GCAGAGCAACCCGTTGGAGCTGCAAATTATCACGTGGATAGGTTGTGGAA
TCTCCATCGCTGGGCTCTTCATTACACTGGTCACCTACCTGTATTTCTAG
TAAGTAGTTTTTAATTTCGTGTGTAGGAGGACAGAAGAAGTTCTGAATTC
TCGATGTAAAATTTCAGACTAATTGGTATTGGAATTTGATTAGATTTAAA
GGTGATTGCACAtttattgaaagaaatgaaatgattttcaaGCGCGTTTG
AATGGAAGGATCCCGAACCTCCTAGATTGATTCTCTAATTTGTAACAAAT
GGAATGGGAATTAAACCCATAGTCTCAGGTGCCTAAGAAACgtactgtac
gtttattaatttcaaCAAACATTATTTACCCCCTAACCTAACCTGAAAAG
ACCCTTCAATCAGATTTTTATGCCTTCATTTTCAactctgtacgtttatt
aggaaCTCGAGAGTAACCCCTCGTTTTTCAGattgaaattatatttattt
CCCTTTCCACAGTAATTTACGAACGAAGTTAGCACCAAAGATTTTGATCA
ATCTCTCCATCTCTATGTTGTGTTTGCTGATCCTCTTCATCTCGGTGGTG
GATCGCACCACACCCAGGGTCGGTTGTCAAATCATTGCTGGTCTCATCCA
GTACTTCATGCTCTCCACTTTCTGTTGGATGGCTGTGGAGGGAGCCAACC
TGTACCGTATGTTCGTCACCATCTTCTCCAGTGGAAGCACAGGCAAATTC
TACAAAAAAGCTTCCATTTTCGGATGGGGTAAGTTTCCATACACACCAAC
CTTTTAGTTAGTGATTAAGAGAGGATTTgcttcaataaattttgaaatct
tcaacTTCACCGCATTCTCGTTATCGTTTTgagaatttcttaacgaaagt
TAATCCTGGGAGAGCCCATATTTCAaagctttttaaagtttttcccaAAC
TGCCAATCACAAGTACCTTGACCTTTGTTCCTCTCTTCACAGAGATGATA
GAACTAAAACTTCATTCATTGCAATAATGCTAATCTTTTCTCGTTATAAT
CGTTAGGTTTACCAGCATTGATAGTAATCATCACAGGAGCAGTGAGTCCA
GAAAACATGGGGAATGAACAATTGTAAGTTTTGGTTATCTTCTTCAGTTT
TGTTTTGGATGATTCGATGCTCATTATTTGTCGGTGATGTTGAGAACAGT
AGGGGCTTACAATCATAAATGACGATAAAGATCAACAAGATTTACCCCca
tttattttgtgtttttattctCATGTCTAATTTTAGTTACAAACAGAGGC
CGGCTCTCCATACTCTGGAAAAAAGTCCTTAATTGAGAGTAAAAAATAGG
GGGATAGCAATATATTAGGGTCTTAGCACGAAACTTTTGGCATTTGTATT
ATTCATATTCATTTTAGTTGTGTGACGGTTGGTTATCCATTCTATTTCGC
CGTCCTCCTACCCGTATGTCTCATCTTGATGTTCAACTTTGCCATTATCA
CACTGGTCATGAGATCGTTGGTCAGAACTAAAGCAAATGCTGTTGGTCAA
GGGAAAAGTATTCAACAACAAGCTAAGATTGCTTTTGCTGCCAGTGCCTT
ATTGGGTTTGACTTGGATCTTTGGTGTATTAGCTGTTGGTGATCTGAGAG
Atttcttccaatatcttttcaccatcttcaattcacttcaaggatttttc
atcttcttcttttaCACACTAAGAAATCCTGAAGCCAAGAAGAATTGGTT
GATAACCCTCGGTTTAAGGGATGAGAAACTATATTCATTGACGGATTCAA
CTGCAGCTTATAATAGGCAGCGTAGGACAGGTAAACtaattactttttta
aatactatACACGATATGGAGGAAAATCTAATCGAAAGATCTTGACACCG
GACTGACTCAAAGGCTAAGTCTCCTAAGtcattttgaaattcaagtAAGG
CCATAGGTCTTTGGGTTTTGGCTCCCATCTGGAATTTCTCAATATCAGCT
CTTCTTCGTTTATTTAAGAAATTAGAGATAGTTTGTCGGAATGTAAATAT
ATAAAGGGAATGGTTCAACGTTTATTTTTGTTACCaattaaaatcttaaa
ctgTTGATTTCTCGAATCAGCTAAGCTTGATTGAAGATGGAGGtatttct
gtttgttttttacttcagttttttacaaatttcaattctttatttttgtt
gtaGGTGCTGGCACATCGACGAGTACAAGTGTTTACGTTTCATCTACCTC
TGCTTga Coding sequence (CDS) from alignment at sc0000133_pilon:259660..264616+ >XLOC_042141 ID=XLOC_042141|Name=XLOC_042141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4260bp|location=Sequence derived from alignment at sc0000133_pilon:259660..264616+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGTGACACAAGTGGATCGGAAGTCTTTCTGTTCGTCAGGTGATTCCCT
GATCTCAAACCTACAAGGAATCACCACTCTCGGAATCAATAACATCAAAA
CGATAACTCAAGAATGTGACACAAGTGGATCGGAAGTCTTTCTGTTCGTC
AGGTGATTCCCTGATCTCAAACCTACAAGGAATCACCACTCTCGGAATCA
ATAACATCAAAACGATAACTCAAGATTGTTGTCCAGCAGACACAGTTGGC
GAGGAATCATTCAAAGGAGTTTACAATTATAACGTCACTCTAGTCAACAC
AGACGTCCGCCAAACTTGTGTTTACTCAGCGTCTTCGTTAAGCGCACGAC
AATGCATCCAAAACTTGGAGCTTGGTCCTCAATGGGGTGAAGCAGATCTT
GGACAATGCTCTGCTAAAAGTGATGTAACAAATCAACTCATTGAGCTGAC
AAAGATTGTTGTCCAGCAGACACAGTTGGCGAGGAATCATTCAAAGGAGT
TTACAATTATAACGTCACTCTAGTCAACACAGACGTCCGCCAAACTTGTG
TTTACTCAGCGTCTTCGTTAAGCGCACGACAATGCATCCAAAACTTGGAG
CTTGGTCCTCAATGGGGTGAAGCAGATCTTGGACAATGCTCTGCTAAAAG
TGATGTAACAAATCAACTCATTGAGCTGACAAAGGAATTGACTTGTACAA
CGGGCAACTGTACGCTAAACGTTGTGAAAGTGACAGAGAATCTTCGTGAG
ATTGTCAACAACAATACAGCTATCACAACCAGACAGGATCTTGAATTCAT
CGCTGACATTGTTGGCAATACTGCAGACTCCAACACAACTAGCAGTGAAA
CTAAACTGGAATTGACTTGTACAACGGGCAACTGTACGCTAAACGTTGTG
AAAGTGACAGAGAATCTTCGTGAGATTGTCAACAACAATACAGCTATCAC
AACCAGACAGGATCTTGAATTCATCGCTGACATTGTTGGCAATACTGCAG
ACTCCAACACAACTAGCAGTGAAACTAAACTGggTGCTGAAAACATTATG
AAGACTGTTGATGTGGTAGTAGTCTCTGATAAAAGTATCATTGCAGAATC
GGAAGAAAAGACTCAATCGTCCACAAAACTTGTCAAAAACTTAGAAAAGT
TGACATCAGCCATCGGTAAAGTTGTGGAGGAAACTAAAGAACCATTCTCA
GTGACTGGTGAAAATACAGCTCTGATTGTCAACTTTGAGCCTCCTAAAGC
GCTGACACTTATTGCAAGAGATCTTACATCCTCTGACAAtcaaaatgaga
taaacatTGCTATCATGAACAGCACCACATCGCCACCaaaaaaaCGACCA
TCATTGGTTAGAGCTGAAATCCCTGCCGAAGCTTTTGGTAACAAGAGTCA
AGCAGTGTCGTCACTTATCTTCAGAGAAAACACCTTGCTACAGGAAACCA
ATAACACCAACCCAGTGATCAGCTCAGTATTAAGCATCAGTGTTGGTGAT
CAACCAGTATCTAATCTCACAACACCATTGATTCTTCGCTTCCAACGAAC
AACTCCTAATGAAACATTGGATGGAACAGATCTTTGCTCCTTTTGGGATT
TCTCAGCTCggTGCTGAAAACATTATGAAGACTGTTGATGTGGTAGTAGT
CTCTGATAAAAGTATCATTGCAGAATCGGAAGAAAAGACTCAATCGTCCA
CAAAACTTGTCAAAAACTTAGAAAAGTTGACATCAGCCATCGGTAAAGTT
GTGGAGGAAACTAAAGAACCATTCTCAGTGACTGGTGAAAATACAGCTCT
GATTGTCAACTTTGAGCCTCCTAAAGCGCTGACACTTATTGCAAGAGATC
TTACATCCTCTGACAAtcaaaatgagataaacatTGCTATCATGAACAGC
ACCACATCGCCACCaaaaaaaCGACCATCATTGGTTAGAGCTGAAATCCC
TGCCGAAGCTTTTGGTAACAAGAGTCAAGCAGTGTCGTCACTTATCTTCA
GAGAAAACACCTTGCTACAGGAAACCAATAACACCAACCCAGTGATCAGC
TCAGTATTAAGCATCAGTGTTGGTGATCAACCAGTATCTAATCTCACAAC
ACCATTGATTCTTCGCTTCCAACGAACAACTCCTAATGAAACATTGGATG
GAACAGATCTTTGCTCCTTTTGGGATTTCTCAGCTCCGACCGGAGAGGCA
GGTCGTTTTGGTCGTTGGAGCACGGATGGATGTCGGCTGATAGCCAATCA
AACCACAGCAACTGATGTCGTTTGTGAATGTGATCACATGACCAACTTCG
CCATCCTTTTTGACGTTTCACAGACGCAGAGCAACCCGTTGGAGCTGCAA
ATTATCACGTGGATAGGTTGTGGAATCTCCATCGCTGGGCTCTTCATTAC
ACTGGTCACCTACCTGTATTTCTACGACCGGAGAGGCAGGTCGTTTTGGT
CGTTGGAGCACGGATGGATGTCGGCTGATAGCCAATCAAACCACAGCAAC
TGATGTCGTTTGTGAATGTGATCACATGACCAACTTCGCCATCCTTTTTG
ACGTTTCACAGACGCAGAGCAACCCGTTGGAGCTGCAAATTATCACGTGG
ATAGGTTGTGGAATCTCCATCGCTGGGCTCTTCATTACACTGGTCACCTA
CCTGTATTTCTATAATTTACGAACGAAGTTAGCACCAAAGATTTTGATCA
ATCTCTCCATCTCTATGTTGTGTTTGCTGATCCTCTTCATCTCGGTGGTG
GATCGCACCACACCCAGGGTCGGTTGTCAAATCATTGCTGGTCTCATCCA
GTACTTCATGCTCTCCACTTTCTGTTGGATGGCTGTGGAGGGAGCCAACC
TGTACCGTATGTTCGTCACCATCTTCTCCAGTGGAAGCACAGGCAAATTC
TACAAAAAAGCTTCCATTTTCGGATGGGTAATTTACGAACGAAGTTAGCA
CCAAAGATTTTGATCAATCTCTCCATCTCTATGTTGTGTTTGCTGATCCT
CTTCATCTCGGTGGTGGATCGCACCACACCCAGGGTCGGTTGTCAAATCA
TTGCTGGTCTCATCCAGTACTTCATGCTCTCCACTTTCTGTTGGATGGCT
GTGGAGGGAGCCAACCTGTACCGTATGTTCGTCACCATCTTCTCCAGTGG
AAGCACAGGCAAATTCTACAAAAAAGCTTCCATTTTCGGATGGGGTTTAC
CAGCATTGATAGTAATCATCACAGGAGCAGTGAGTCCAGAAAACATGGGG
AATGAACAATTGTTTACCAGCATTGATAGTAATCATCACAGGAGCAGTGA
GTCCAGAAAACATGGGGAATGAACAATTTTGTGTGACGGTTGGTTATCCA
TTCTATTTCGCCGTCCTCCTACCCGTATGTCTCATCTTGATGTTCAACTT
TGCCATTATCACACTGGTCATGAGATCGTTGGTCAGAACTAAAGCAAATG
CTGTTGGTCAAGGGAAAAGTATTCAACAACAAGCTAAGATTGCTTTTGCT
GCCAGTGCCTTATTGGGTTTGACTTGGATCTTTGGTGTATTAGCTGTTGG
TGATCTGAGAGAtttcttccaatatcttttcaccatcttcaattcacttc
aaggatttttcatcttcttcttttaCACACTAAGAAATCCTGAAGCCAAG
AAGAATTGGTTGATAACCCTCGGTTTAAGGGATGAGAAACTATATTCATT
GACGGATTCAACTGCAGCTTATAATAGGCAGCGTAGGACAGTTGTGTGAC
GGTTGGTTATCCATTCTATTTCGCCGTCCTCCTACCCGTATGTCTCATCT
TGATGTTCAACTTTGCCATTATCACACTGGTCATGAGATCGTTGGTCAGA
ACTAAAGCAAATGCTGTTGGTCAAGGGAAAAGTATTCAACAACAAGCTAA
GATTGCTTTTGCTGCCAGTGCCTTATTGGGTTTGACTTGGATCTTTGGTG
TATTAGCTGTTGGTGATCTGAGAGAtttcttccaatatcttttcaccatc
ttcaattcacttcaaggatttttcatcttcttcttttaCACACTAAGAAA
TCCTGAAGCCAAGAAGAATTGGTTGATAACCCTCGGTTTAAGGGATGAGA
AACTATATTCATTGACGGATTCAACTGCAGCTTATAATAGGCAGCGTAGG
ACAGGTGCTGGCACATCGACGAGTACAAGTGTTTACGTTTCATCTACCTC
TGCTTgaGTGCTGGCACATCGACGAGTACAAGTGTTTACGTTTCATCTAC
CTCTGCTTga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:259660..264616 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2080-2130:4907 |
| Aaloc | 1666-2076:4119 |
| Aaloc | 1600-1662:3759 |
| Aaloc | 1333-1596:3214 |
| Aaloc | 1096-1329:2564 |
| Aaloc | 517-1092:1644 |
| Aaloc | 343-516:842 |
| Aaloc | 115-342:408 |
| Aaloc | 1-111:1 |
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