XLOC_042133 (mRNA) -

Overview
NameXLOC_042133
Unique NameXLOC_042133
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000133_pilon:55810..56483-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042133 ID=XLOC_042133|Name=XLOC_042133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=674bp|location=Sequence derived from alignment at sc0000133_pilon:55810..56483- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTCTTTTCTTGTACACTGCAACTTTTTTGGCTGTCACGCACGAAGG TAAGAGCTTGCTGTCGTTAGTTTGCTATTGTGTATAGTCGTATCTTCAAA CTATTAAAATTTCAAGCAACTTGAAACAAATCGATAAACAATAACTCGCA ACATCTTTTCTTCTTTCAAAGCTCACTAAGGCCGACTATCTGATGAAAAT AATTCGATTCTTCTAAATCAAGCTTTTCTACCTAACATGATTGTTAAATC TGCAGTCTAAATGAAAACCGGCCTTCTCCCAATAAGAGAACGACAGTCAA ATGACATTTTCTTTCAATGCTTTTAAGTATTCGGTGTGTCTGAATGTTAC AACAATATGGAAGCCACCACCACAGCGAATTGTACAGCGCAAAACAATGG AACATGCTTCACAAGAATGGTCTATATCAACGAATCAAGCCAATCAACAA ATGTTACACGTGGTTGTGCAGCAATTGATGCTTGCAAGAACAACTGTGCA GTGCAGACGGTTGGAGCAGAGAGTACACGAACGTGCGAAGATTGTTGTTA CAAAACAAAGTGTAACATGAAGAAAAATTTGTTCGACGGAGGAATCAGCT CTTCCTCTCATATCACCATCTCAATCCTCACCGTCCTTGGGTTGGCATTG GTAGCCCGGCTGTTTCATTCGTGA

Coding sequence (CDS) from alignment at sc0000133_pilon:55810..56483-

>XLOC_042133 ID=XLOC_042133|Name=XLOC_042133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000133_pilon:55810..56483- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTCTTTTCTTGTACACTGCAACTTTTTTGGCTGTCACGCACGAAGA
TGCGTCTTTTCTTGTACACTGCAACTTTTTTGGCTGTCACGCACGAAGTA
TTCGGTGTGTCTGAATGTTACAACAATATGGAAGCCACCACCACAGCGAA
TTGTACAGCGCAAAACAATGGAACATGCTTCACAAGAATGGTCTATATCA
ACGAATCAAGCCAATCAACAAATGTTACACGTGGTTGTGCAGCAATTGAT
GCTTGCAAGAACAACTGTGCAGTGCAGACGGTTGGAGCAGAGAGTACACG
AACGTGCGAAGATTGTTGTTACAAAACAAAGTGTAACATGAAGAAAAATT
TGTTCGACGGAGGAATCAGCTCTTCCTCTCATATCACCATCTCAATCCTC
ACCGTCCTTGGGTTGGCATTGGTAGCCCGGCTGTTTCATTCGTGATATTC
GGTGTGTCTGAATGTTACAACAATATGGAAGCCACCACCACAGCGAATTG
TACAGCGCAAAACAATGGAACATGCTTCACAAGAATGGTCTATATCAACG
AATCAAGCCAATCAACAAATGTTACACGTGGTTGTGCAGCAATTGATGCT
TGCAAGAACAACTGTGCAGTGCAGACGGTTGGAGCAGAGAGTACACGAAC
GTGCGAAGATTGTTGTTACAAAACAAAGTGTAACATGAAGAAAAATTTGT
TCGACGGAGGAATCAGCTCTTCCTCTCATATCACCATCTCAATCCTCACC
GTCCTTGGGTTGGCATTGGTAGCCCGGCTGTTTCATTCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042133XLOC_042133-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133_pilongenomesc0000133_pilon:55810..56483 -
Properties
Property NameValue
Aaloc52-396:346
Aaloc1-48:675