XLOC_042132 (mRNA) -

Overview
NameXLOC_042132
Unique NameXLOC_042132
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000040_pilon:1988853..1990163+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042132 ID=XLOC_042132|Name=XLOC_042132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1311bp|location=Sequence derived from alignment at sc0000040_pilon:1988853..1990163+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGTTTCTGTCCAAGTCGTTTGATGACAACTACCAACGCAACGT ATTCGGGTACCAGATGAAGTGGTCTACCAAACACAAACCCAGGACGAACC AAAGTCTACCTTTCACCACGGGTAAGAACAATCTTTTTCAAACAACCGCG ACGCAAAATGGTTTGGAAATATCAACGTTTTTTGGACCTTCTGACAATTT CCCAACCGTCTTCATCATAttctttttgtttggagttTTGCCCTCTATCT CCATTGCTGCTGCTGCTGGCACCTGTACCCCCTTCATCCATGTCttaaag aaaagtagaaaacccataatcaaataaaagaaGAGACATCAAAACACAAT ATGAATAAGATGAACAAAATAGAAATCCAAAAAGACCTCTTTCAATTTAA CACCTCTTCATTTTAACCTTGAAGTGGAGAACTTAATCCAATTTTCACTA CACGAAGTTaaaaaaaccttatttattaTACAACGCATATATCAGGGAGA GATATTGTTCGAGTTGTAGCATTATCTTTAAGACCATCAATTACGTTGTT GGGCTAACAAGAAACATAAAGCTTTGATGTGATGATAAAATAAATCTTAT TATGAGCAGTGAAGCAATTACACTTCACATATAATGgttaaaaaagattt aagagATTACTAGTTAAGTTGTCATTTGAAAATAGATTAATTGCACTCTC AAATGCTACGTCTGTATTACAAGATATTGTTGTGTATCAATTATTTGAAA ACATGTTAACTTGGTTTTATCAAAGTAATTGCTGATGTGAGAAAATCGAA AGCGGTTTGCCAAACagatttttatttgataagaatGCTACCAAGGAAGA GAACTTTTGTCATTTCAAGAAAGGGTATGATCTAATGATTGCCTTGCAGC TTTGTTTAATTTACGCTAGTcgctttttttttgcaaaatcttttctttaa aaaactcattttcgattgttttaaaaaGTAAGTTTCTCAAGAGCGTAGGA AGCGAACACAAGCAAGATTTACaaaatctttcgaaataaacAGCATATGA TTTGTTTATGTTATGATAGAAAGTTTTTCCTCCTACTCTTCTTAGAGGGA AGACGAATCAAGAATTCGCTGGCGAATGGCAAAGATGTGATTGATCTAGG TAAACAATCTCTATTCATTACTCACCTACATCCATTGTGAAAGAATTGAC ATTCGTCTGAAACAAAACAAGATCAATAGTAGTAAATATCTGgataatgt tttaaaaatggcaTCTGGAGAAAACAACCAAAAGATTTATTACACATACA AATATGTAATA

Coding sequence (CDS) from alignment at sc0000040_pilon:1988853..1990163+

>XLOC_042132 ID=XLOC_042132|Name=XLOC_042132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=858bp|location=Sequence derived from alignment at sc0000040_pilon:1988853..1990163+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGTTTCTGTCCAAGTCGTTTGATGACAACTACCAACGCAACGT
ATTCGGGTACCAGATGAAGTGGTCTACCAAACACAAACCCAGGACGAACC
AAAGTCTACCTTTCACCACGGGTAAGAACAATCTTTTTCAAACAACCGCG
ACGCAAAATGGTTTGGAAATATCAACGTTTTTTGGACCTTCTGACAATTT
CCCAACCGTCTTCATCATAttctttttgtttggagttTTGCCCTCTATCT
CCATTGCTGCTGCTGCTGGCACCTGTACCCCCTTCATCCATATGAAGAAG
TTTCTGTCCAAGTCGTTTGATGACAACTACCAACGCAACGTATTCGGGTA
CCAGATGAAGTGGTCTACCAAACACAAACCCAGGACGAACCAAAGTCTAC
CTTTCACCACGGGTAAGAACAATCTTTTTCAAACAACCGCGACGCAAAAT
GGTTTGGAAATATCAACGTTTTTTGGACCTTCTGACAATTTCCCAACCGT
CTTCATCATAttctttttgtttggagttTTGCCCTCTATCTCCATTGCTG
CTGCTGCTGGCACCTGTACCCCCTTCATCCATACCTACATCCATTGTGAA
AGAATTGACATTCGTCTGAAACAAAACAAGATCAATAGTAGTAAATATCT
GgataatgttttaaaaatggcaTCTGGAGAAAACAACCAAAAGATTTATT
ACACATACAAATATGTAATAACCTACATCCATTGTGAAAGAATTGACATT
CGTCTGAAACAAAACAAGATCAATAGTAGTAAATATCTGgataatgtttt
aaaaatggcaTCTGGAGAAAACAACCAAAAGATTTATTACACATACAAAT
ATGTAATA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042132XLOC_042132-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000040_pilongenomesc0000040_pilon:1988853..1990163 +
Properties
Property NameValue
Aaloc292-429:1174
Aaloc1-291:1