XLOC_042120 (mRNA) -

Overview
NameXLOC_042120
Unique NameXLOC_042120
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000288_pilon:84155..84741-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042120 ID=XLOC_042120|Name=XLOC_042120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=587bp|location=Sequence derived from alignment at sc0000288_pilon:84155..84741- (Clytia hemisphaerica_ch_hm2_pilon)
AGCGAGTATTGGATTCGAATCAACCTCGCTTTGGAGTATTGCATCAAAGA AGTGCTCATTGGTGTACTTCACAACGTGCACAATGACACTTCTTATACTG GACTTCCAACTTGTCCAAAACAACTACATCAAATATTCGTGCAATGCAAA CAAAACAAGAAACACGAGTTGAACAAAGTGTTGAAGAAAGAACAATGGGA GATATTGTGTCCACAAAATGGATTAACCAACCCAGAAGATTGGGATATCA CCTTACTGATTGCTGTATTGAGATCAGTGGTTGGATTGCAACCTGCTGGA GGATGGAAAATCAAATCTCTTCAACCCAACGATCAATCTATTGGAGCCTT CTTGTTTTTGATCAGAAATTTAAGAAATGAATTAATGCATGGTTCAATCA GTGCAGTACCAAATTTACAAGCTTTCAAACAACTGAGATCTCGAATGGAG AACATTTTACTGGGATTGAAATATAACAATATGCAAATGTTTTATGATTT GGAAAGTTGTTCATTGGATAAACATGTGTTGGTTATTTCTCAAATGGTCA CCAATTTGGATCAAGAAGTGGATTTGTTGCGAAATGA

Coding sequence (CDS) from alignment at sc0000288_pilon:84155..84741-

>XLOC_042120 ID=XLOC_042120|Name=XLOC_042120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=804bp|location=Sequence derived from alignment at sc0000288_pilon:84155..84741- (Clytia hemisphaerica_ch_hm2_pilon)
AGCGAGTATTGGATTCGAATCAACCTCGCTTTGGAGTATTGCATCAAAGA
AGTGCTCATTGGTGTACTTCACAACGTGCACAATGACACTTCTTATACTG
GACTTCCAACTTGTCCAAAACAACTACATCAAATATTCGTGCAATGCAAA
CAAAACAAGAAACACGAGTTGAACAAAGTGTTGAAGAAAGAACAATGGGA
GATATTGTGTCCACAAAATGGATTAACCAACCCAGAAGATTGGGATATCA
CCTTACTGATTGCTGTATTGAGATCAGTGGTTGGATTGCAACCTGCTGGA
GGATGGAAAATCAAATCTCTTCAACCCAACGAGCGAGTATTGGATTCGAA
TCAACCTCGCTTTGGAGTATTGCATCAAAGAAGTGCTCATTGGTGTACTT
CACAACGTGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAA
ACAACTACATCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGT
TGAACAAAGTGTTGAAGAAAGAACAATGGGAGATATTGTGTCCACAAAAT
GGATTAACCAACCCAGAAGATTGGGATATCACCTTACTGATTGCTGTATT
GAGATCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTC
TTCAACCCAACGGATAAACATGTGTTGGTTATTTCTCAAATGGTCACCAA
TTTGGATCAAGAAGTGGATTTGTTGCGAAATGAGATAAACATGTGTTGGT
TATTTCTCAAATGGTCACCAATTTGGATCAAGAAGTGGATTTGTTGCGAA
ATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042120XLOC_042120-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000288_pilongenomesc0000288_pilon:84155..84741 -
Properties
Property NameValue
Aaloc334-402:70
Aaloc1-330:588