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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:94884..97893- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042090 ID=XLOC_042090|Name=XLOC_042090|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3010bp|location=Sequence derived from alignment at sc0000288_pilon:94884..97893- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCAAAATATCATCAAAAATACTTCGATAAAGGTATTGAATCTCT
TTCAAGTTGATAAAATTTTCTCTTTTGCATTTCTTTTAATTTGATTATTC
TAAACTGCCTGGCTTGTACTCGATATCGAAACAATATTTATAGGCCTTAT
AGTTTATTCACAGATTAAAACCAAGAAATCCAAATTTAGCTTAACGTACT
CTCTTAGTTTTACATTTTGATTTTATTAAACCTTTGCTCATCCTTGAATT
CTATAAACCTTCTATAAACCTCTGAGCCATTTTACTTGTGATATCAAGTT
CCTCATAAATCTTTCTCATACGTTTTTCTCGGAGCTCTTCAATATTTTCA
TTCCTGTTAATAGTTGGTATTGTACACTGTGGTGATAAGAAGTCCAAACA
ACTGGTGGATCGTTTGATGAAGAATATCGCACAAAAAGATTATCTCAACG
AGACAACGTTTACCAGCAAAGATTTTCATACCAGCAACAATGTCCCGTTG
TTAGTCAGCATGACTCTGGCAACTTTCAAAGAATCTAGACTACCCTTACT
AGTGATTCTTACTAAAGACTTTTTCCACAAGATCTGGACAGATCAATTGA
AGATTGGAATTCAACAAATGTTGCTTGGATATTCAAGTCATTTTTGTTTA
CATATCTGGATGGATGACTTAGACAGTACTGAGGTCAGGAAGTGGAGTAC
CGGCCTTCTCAGAAACGATTCTTCCTTCAGAAGAGTCAAGTACCAAGACT
TGCAATATACTACTGATAAAGAACTAAAAGAACAGATCATTGCTTTGATT
AGAGGTATTCAATTTTTTTTTTAAGAGGACTTCATCATTTTTCTAAGTGG
AATATTTCAGGCTTGGACAAAGGCAAAATCAAACTTTTATTATAACTCAT
GGAGATTCCTAAAAACAAGAAATTTCCGCAGGAAGAAACATTCGCTGCTT
TCACGAAATTGCAAAAGTTTATTACGCGAGAGATTCTTTTGACAGACTGA
TTCGAGAATAGTTAAAGTTTTCGTGTTTGTGAAAAACTCCTTCTCTTAGA
ATCTTACCTAGGCCATGAAATTTTCTTAAAAGCAACTGAAATCGTATGGG
AGTTTTTTCTAGGAAAAAATTTTGAAAAGGACTATTCTTACAATGGATTT
GAATAGGTTGATTAAAAAAACTCGTACAAAGCAATCCTCTTTTGTCAGGT
AATCACCATTTTTTCTGGCAATTAAGTTCGGTAAGTTTTGAGAAATGTTG
TGAAAATCATTACTTTGAAGTCGAAAATTTCACCTAAAGTTTATACTGCA
TGGGAAAAACAAGAAGTAGAGATGGAAGCTAATCTGAAATCTACTTTACA
TTGAGCCTTGATGAAACAATTTTATAAGAACAACGAGGCTCAAAATCGAT
AAAAAAGTTAACCAATTTAAGAACAATGGTTGTTTAATTCTTTTAAGAAC
TAATAACCGAAGGCGGTTATAGACGGTGATATCGTCTATCAAGAGTTATT
AATTTGATTCTTATAAAGTATATGCTTATAAGAAAAATAAATATGCTCAT
ATTGTGTGCCATCCCTTGTTTACTTTATAAGAACTAATAACCGAAGTGTA
TATCACCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGTATATGCT
TATGAGAAAAATGAATATGCTCATATTGTGCGCCATCCCTTGTTTACTTC
GTAAGAACTAATTACCGAAAGGTATATCACCGTCTATCAAGAATTATTGA
TTTGATTCTTATAAAGTATACGCTTATAAGAAAAATAAATATGCTTATAT
TGTGCGCCATCCCTTGTTTACTTTGTAAAAACTAATTCCCGAAGGGTATA
TCATCGTCTATCGAGAGTTATTGATTTGATTCTTATAAAGTATACGCTTA
TAAGAAAATAAAGAAAAAGACTAAAGACACAAAGATATATGACGTAATCT
AAAGAAAACCCGCGAAAATCGTCCGTGGTTATACGAGCGTGTAATTTGTA
AATCAATTTTAGTGAGTTCGTCCACCGCATCGAGTACTTTCGTTTTCTAA
TTTTTTTTCCTCACCGCCGCCGCCGCAGAATGCTGATTGTAATACTTTCG
TTAAGGCGAAATTAAAAAACGATCTTATAAAACTAACTGCTGAAAACTAC
ACGAGTAGTGCATAAATCTGCATAAATTCATTTAGAGATATTTTCGTGAC
AATAAGAAGACAATGGATCTCTCTTGGGAGCAATAAGAGAGCTTAATCCA
TCTATTCCAATCCGATAATTCGTGAAAGTTAGTCACCGCGAATTGCAGAA
ATTTCGCGAATTTCTCCATTCGTTTCATCTCCTTAAGTATTGAATTTTCT
ATATGATCTTTACTTCATTTTCCTATAATTATTTTAAGTAAATGTCCCCG
AAAATTTTGTCTCCAGAAATACTATGTGTCCCTTTTTCAATCATAATTTG
ATAATTCATCATTTTTTCAAGACAATACAGATAGAGAAGCAAAGTATCGA
AATTATTCAGTACAAGACCAAGACGCATTGAACTTCACCGATTTAGCGTT
GAAATCATTATCCATCAAATCAAAGGACACAGCAGAGGGCTCACCACCGA
CAAGCATAACATCTGTTCCTTCGTCCTCAAGCAAGAAACGAAAGAAAAAG
AAGAACCAATCTGCCAACCAGTATTTAAGAGGAGCGGCTGCATTCCCCAA
AGCGAAAGTACCAAAAGAGACAACTCGATTGAGGGATTTATCACTGGATC
AACGAGACAGAATAACGACCTTACTGGATGTTGGGTACGGTGCCAACTGG
AAACAAATTGGTCATTTCTATCAACTAACACCCGCTGAATTCCGTGTCAT
TGAAACGGCGGGCCATGCTGGTCAACGACCGGCTGATTGTTTGTTGAGAT
TGTTGTTGGCGAAAATGCCTGATTTGAGTTTGCAGGATTTAAAGGAGAAA
TGTCAGCGAATTTTAAGGAGGGATGTTATCGAAATCATCGATGAATTGAT
GGGGAGCTAG Coding sequence (CDS) from alignment at sc0000288_pilon:94884..97893- >XLOC_042090 ID=XLOC_042090|Name=XLOC_042090|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2034bp|location=Sequence derived from alignment at sc0000288_pilon:94884..97893- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCAAAATATCATCAAAAATACTTCGATAAAGATGAATTCAAAAT
ATCATCAAAAATACTTCGATAAAGTTGGTATTGTACACTGTGGTGATAAG
AAGTCCAAACAACTGGTGGATCGTTTGATGAAGAATATCGCACAAAAAGA
TTATCTCAACGAGACAACGTTTACCAGCAAAGATTTTCATACCAGCAACA
ATGTCCCGTTGTTAGTCAGCATGACTCTGGCAACTTTCAAAGAATCTAGA
CTACCCTTACTAGTGATTCTTACTAAAGACTTTTTCCACAAGATCTGGAC
AGATCAATTGAAGATTGGAATTCAACAAATGTTGCTTGGATATTCAAGTC
ATTTTTGTTTACATATCTGGATGGATGACTTAGACAGTACTGAGGTCAGG
AAGTGGAGTACCGGCCTTCTCAGAAACGATTCTTCCTTCAGAAGAGTCAA
GTACCAAGACTTGCAATATACTACTGATAAAGAACTAAAAGAACAGATCA
TTGCTTTGATTAGAGTTGGTATTGTACACTGTGGTGATAAGAAGTCCAAA
CAACTGGTGGATCGTTTGATGAAGAATATCGCACAAAAAGATTATCTCAA
CGAGACAACGTTTACCAGCAAAGATTTTCATACCAGCAACAATGTCCCGT
TGTTAGTCAGCATGACTCTGGCAACTTTCAAAGAATCTAGACTACCCTTA
CTAGTGATTCTTACTAAAGACTTTTTCCACAAGATCTGGACAGATCAATT
GAAGATTGGAATTCAACAAATGTTGCTTGGATATTCAAGTCATTTTTGTT
TACATATCTGGATGGATGACTTAGACAGTACTGAGGTCAGGAAGTGGAGT
ACCGGCCTTCTCAGAAACGATTCTTCCTTCAGAAGAGTCAAGTACCAAGA
CTTGCAATATACTACTGATAAAGAACTAAAAGAACAGATCATTGCTTTGA
TTAGAGACAATACAGATAGAGAAGCAAAGTATCGAAATTATTCAGTACAA
GACCAAGACGCATTGAACTTCACCGATTTAGCGTTGAAATCATTATCCAT
CAAATCAAAGGACACAGCAGAGGGCTCACCACCGACAAGCATAACATCTG
TTCCTTCGTCCTCAAGCAAGAAACGAAAGAAAAAGAAGAACCAATCTGCC
AACCAGTATTTAAGAGGAGCGGCTGCATTCCCCAAAGCGAAAGTACCAAA
AGAGACAACTCGATTGAGGGATTTATCACTGGATCAACGAGACAGAATAA
CGACCTTACTGGATGTTGGGTACGGTGCCAACTGGAAACAAATTGGTCAT
TTCTATCAACTAACACCCGCTGAATTCCGTGTCATTGAAACGGCGGGCCA
TGCTGGTCAACGACCGGCTGATTGTTTGTTGAGATTGTTGTTGGCGAAAA
TGCCTGATTTGAGTTTGCAGGATTTAAAGGAGAAATGTCAGCGAATTTTA
AGGAGGGATGTTATCGAAATCATCGATGAATTGATGGGGAGCTAGACAAT
ACAGATAGAGAAGCAAAGTATCGAAATTATTCAGTACAAGACCAAGACGC
ATTGAACTTCACCGATTTAGCGTTGAAATCATTATCCATCAAATCAAAGG
ACACAGCAGAGGGCTCACCACCGACAAGCATAACATCTGTTCCTTCGTCC
TCAAGCAAGAAACGAAAGAAAAAGAAGAACCAATCTGCCAACCAGTATTT
AAGAGGAGCGGCTGCATTCCCCAAAGCGAAAGTACCAAAAGAGACAACTC
GATTGAGGGATTTATCACTGGATCAACGAGACAGAATAACGACCTTACTG
GATGTTGGGTACGGTGCCAACTGGAAACAAATTGGTCATTTCTATCAACT
AACACCCGCTGAATTCCGTGTCATTGAAACGGCGGGCCATGCTGGTCAAC
GACCGGCTGATTGTTTGTTGAGATTGTTGTTGGCGAAAATGCCTGATTTG
AGTTTGCAGGATTTAAAGGAGAAATGTCAGCGAATTTTAAGGAGGGATGT
TATCGAAATCATCGATGAATTGATGGGGAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:94884..97893 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-1017:538 |
| Aaloc | 40-477:2646 |
| Aaloc | 1-36:3011 |
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