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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:110990..114949- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042089 ID=XLOC_042089|Name=XLOC_042089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3960bp|location=Sequence derived from alignment at sc0000288_pilon:110990..114949- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTT
TGATGGTAAGTTTTACATACTGGACCATAAATCTCACGATGGGAAAAGAA
CTAAAGCCCTTCAATGTTTTGATTAAGAAAGGCAAAGGGAAACTACTTCT
GAAAACATTGTTGAGTTGCCATGAATTCCCTTTACTATAAGTACACACAA
TGTTCAGGTTCAGCACAAGTGAAAGATGATTGCTTATTGGCTAAAATGGC
TAAAAACAAGGGCTTGTTGTTCACGCCCATATTTAGATGACAATGTAGGT
CAGTAGCGTGGTTGGTCGACTAAAATTCGGGCAAACAGAATATAAGAAAG
AATATATCTTTTTAAAATTACGTGATCGAAGCGAGCACAAAAATGTTAGG
GTATTTTTTCTCTCTTGTATTCCAGCACCCCTTAAAAATATCGGCCGCCG
ATGCCAGGCTACTGATGGTGACCAACTTTTCTTGCGTCATCAATTTCAGT
TCATCATTCACCTCTTCTATCCATAGTTTGTGATGATTCCACCAAAAGAT
GTGTTTTATGGAAGGACAAATGCAAATTGCCCATGTACAAATACTACATG
GAGTTGAATTGCCGAAAAACTTGCGATTTGTGCCCAAGTAAGCAAAGAAC
ATCTGTTTTATTGCCCTGGTTCGATTATTTACACCCTGCGAAAAGACTAA
ATCATTCGAATCCTTGATCATTGATGCTATATCCCTTTTCAAACGACAAA
GCTATATGACCTTAGCCCATCTGAAATGAGCACTTTTAAACTCAGTCAAA
AATGACGGCTAGTTGGAAATCATTACACCCGGAAGGGGCTAGCTGACGGG
AGGGGGTGCCACCCGACTTTCGACTCCTGGACCCTTACCGGAACTAAAAA
AGAGAAAATAAAGGGAAATGTCTTGTGAATTTTTGGGACAAATTTGACCA
ATTTTGACCCAAATTCCAATCTTTCCGGGGGTAAAAACCCTTTGTGGGAT
TGAAATTTGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGTAAATC
CAAAAAAGGTACCCTTAAGAGCAGCACATACCGTACCCTCCATTTGCCTA
AGTACCCTCCCGGTCATTACATGATGTTTAATATGAAGCTTTCTATTACT
GTGCTCAACTCATTTGGAAACGCACGGGTGCACGAGATTTGTAGATTTAC
GGATTCGTGATATTCATGACGTAATGTTTTTACGGAAGCACCTGAGAAAT
ACCGGATGGCTGCCACTAATTTCTAATTCATCAAACAATAAAGCTAGTGG
CAAATGCCCGAATTATTTCGGGTGTTTCTGTATAAAACAATTCAATGTTT
AAAACATGAAATGAAAGAAACCCTCAAATTAGATAAACGTTTTCAATTTA
AAGTCATTTTGAAATTCTTTCTGTTTTACAGAATGTGAAGACAAAGTACC
AGTTTGCGATGCCAGCAAATGTTTGGAAGATTTTGATTATAGCCGGCTTA
ATTGTGCAAAGACCTGCTTGTTCTGTTCTGGTAGGTAGAAAGCAACACAA
TTTAATATGTCCTGCTATTGGAGGATGTGTCTTTTTGTTCCTGCAAGAAA
CCATACCATACAAACTTCTTCTTTTAAGCGGTCAAATCAACAATTTACAC
TAGCACTTGTAATTGTTTCAAAGTTTTCATTTCTGCCCGGACTTTCTTTC
CGAGCAATTAAAGAATCAGAACTTACTCGCTTTCTTCAGCACTGCCGTAG
CATTGTGGGTTCGAACTCCCTGCCCTTGATGGATATAAAGGATTTTCGAT
AGCCTCTCTACTTGATTCCCAGTAATTAAAGATATGATATAGGGCTAGTG
GAGAAATCCAGGGAAAGGAGTGGCGCCCTCCCTTACCTTGATGTAGACAG
ATAAAGAAAAATGAGCCTTCTGGACATCTCCGACTGCGGTTGCAAAATTA
CTTTAACGTTCATACATTCGAGTAATTTTATTTGAAATTGTTCAAGTATA
CGTTCGAATAAAAAGTTCAAGTAAGAACTCTACTTTAACATTAGTATTTA
ATATTAACATTTATTCAGTGCTTTTCAGTAATCATTTCCTTTTTTGCTTC
CTTCATTTTCTACTTTTTCATTTTCAGTACCAACCACAATGCCGCCCCCA
CCACCCACGCCCACATGGAAAGTCAAACCTGCAGGTAAAGTTCTCCACTC
TCCTCTTTTAGCTAAAAAGAGTTTGTGTTAAGGTCCCGAATAGTAGGGGG
TCCGAATAAAAGGGGGGTGTCCGAGATTTTCTCAAAATCTAATAAAAGGG
GGTCAAAATTGAAAGGAGGGGTCCAAAATTGTACTTCCAAAAACCGCAAA
AAAGGTAATTACAAGCTGAAAAAAACTATGTAAAGTAATTCAGCTTGTGA
TAGCTGAAAAAAAGGAATTTTAATAACCGAGTGAGGACGTTTATTCGGGG
CCTTAGAGTACCTCCTTAGATAGTTACACCGTAACGTAGAATTTTACTGA
TGAATATTTTAACAACTTTTCCATTGTTTAGGTGAATGTGGTGTGAAGCG
AGCAGGAAGTCGAGTCATCAACGGAGTAGATGCGAAGAGAGGTGAATGGC
CCTGGCAAGTGTTGATCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCC
ATCATTTCACCTTTCTGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAG
AGAAGCTCTCATAGATGAATTCCAAGTCGTGTAAGTGACGCTCTCTAATT
CGACGTTCATATATTCGATAAGCTCCATCATTCGATAATATTTAAAGCCA
TCGCCAACCATAAACTGTTATAAACGATCCCTTTCTATTCGATACGCCTC
CTTATTCGATAGAAAACGAGTTCCTCGTAAAAGTCAAATTAGAGAGCTTC
AACTGTAGTTTCAATTGCTCGTTGAATTCTTACCCTATCAAGGTTTGTAT
TTCTCCTGGGGGGGGGAGGGCAGATAATATTTTCAAAGATGTTTTCTTAA
AGACGACTAATCAAGATTCAAAAAATTAAAGAAAATATAAAGTTTTTACT
TGGATTCATTGATTTTTGGTGTATCTTCCAGCAATGTGTAATCTTTCGGT
CTTGCTAATGACTTATCTTAAGGATTAACTAGACCAAAGAATTTGGAGGA
ATATTTGAATCTCATAAAACTTATTGCAATCAATCCATGATTCCACTTAT
TGAGGTAAAATATCATTTTGACAAAAGTTAAAGTTTCTTGTAATATTTAT
TGTTGTTGCACCAACAACAGTGCACAATCCAACGTTTTTTAACCGTCATC
ACTTTCAGTGTTGGTGAGCACGATTTCGACAAGCCCGAAGGAACCGAAAC
TTCCATCGGAGTCAGCAAGATCATCAAACATCCACGATACAGCACACCGA
CACGATTCGATAAAGATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCC
TTCGATAATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGT
GCCTGTTGGAACCAAATGTTTCATCAGTGGTATGTCTCGATAGTTTTGTT
CAATAATTTGTCTCGATAGTTTTGTTATCCAAATAATTTGTCTTGATAGT
TTTAAGCTCTTCTTTTTGAAATTGGAAAGGTTTTCTAAATCAACTTTGAA
CTTTAGATACCTCGCAAGACAGTCTCTTTTTCAAACGTACACATATTTCT
ATACTTTCCCAAATCCTACAACTAGAAGAACCACCATTACAAACGCCTTA
CAATGCCAAACGATTTGTAGATACAGTTGACGCTCTCTAATTCAACATTC
TACTATTCAATACACTCCATTATTCGATAAAAATCTAATTCCACCTTGAA
AATCGAATAAGAGATCGTCAAATATATTTGTCTTCTCCCCGCTATAAGAT
GTTGAACGTCATTCTGTAGGTTGGGGAAAGATCCATGCATGGGACAACAT
GTATCACAAA Coding sequence (CDS) from alignment at sc0000288_pilon:110990..114949- >XLOC_042089 ID=XLOC_042089|Name=XLOC_042089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1566bp|location=Sequence derived from alignment at sc0000288_pilon:110990..114949- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTT
TGATGATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGT
GGGTTTGATGTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGGA
CAAATGCAAATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGAA
AAACTTGCGATTTGTGCCCAATTTGTGATGATTCCACCAAAAGATGTGTT
TTATGGAAGGACAAATGCAAATTGCCCATGTACAAATACTACATGGAGTT
GAATTGCCGAAAAACTTGCGATTTGTGCCCAAAATGTGAAGACAAAGTAC
CAGTTTGCGATGCCAGCAAATGTTTGGAAGATTTTGATTATAGCCGGCTT
AATTGTGCAAAGACCTGCTTGTTCTGTTCTGAATGTGAAGACAAAGTACC
AGTTTGCGATGCCAGCAAATGTTTGGAAGATTTTGATTATAGCCGGCTTA
ATTGTGCAAAGACCTGCTTGTTCTGTTCTGTACCAACCACAATGCCGCCC
CCACCACCCACGCCCACATGGAAAGTCAAACCTGCAGTACCAACCACAAT
GCCGCCCCCACCACCCACGCCCACATGGAAAGTCAAACCTGCAGGTGAAT
GTGGTGTGAAGCGAGCAGGAAGTCGAGTCATCAACGGAGTAGATGCGAAG
AGAGGTGAATGGCCCTGGCAAGTGTTGATCCGTTTCCTTGGTGACACGCA
CTGTGGTGGTTCCATCATTTCACCTTTCTGGGTAGTGACAGCTGCTCATT
GCGTGGACAAAAGAGAAGCTCTCATAGATGAATTCCAAGTCGTGTGAATG
TGGTGTGAAGCGAGCAGGAAGTCGAGTCATCAACGGAGTAGATGCGAAGA
GAGGTGAATGGCCCTGGCAAGTGTTGATCCGTTTCCTTGGTGACACGCAC
TGTGGTGGTTCCATCATTTCACCTTTCTGGGTAGTGACAGCTGCTCATTG
CGTGGACAAAAGAGAAGCTCTCATAGATGAATTCCAAGTCGTTGTTGGTG
AGCACGATTTCGACAAGCCCGAAGGAACCGAAACTTCCATCGGAGTCAGC
AAGATCATCAAACATCCACGATACAGCACACCGACACGATTCGATAAAGA
TATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGATAATTTGGTCG
GAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTTGGAACCAAA
TGTTTCATCAGTGTGTTGGTGAGCACGATTTCGACAAGCCCGAAGGAACC
GAAACTTCCATCGGAGTCAGCAAGATCATCAAACATCCACGATACAGCAC
ACCGACACGATTCGATAAAGATATCGCTCTTCTCAAGTTGACTCGGCCCA
TTCCCTTCGATAATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAATCGG
CCGGTGCCTGTTGGAACCAAATGTTTCATCAGTGGTTGGGGAAAGATCCA
TGCATGGGACAACATGTATCACAAAGTTGGGGAAAGATCCATGCATGGGA
CAACATGTATCACAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:110990..114949 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 745-783:40 |
| Aaloc | 523-741:652 |
| Aaloc | 325-519:1428 |
| Aaloc | 268-321:1832 |
| Aaloc | 169-264:2528 |
| Aaloc | 58-165:3433 |
| Aaloc | 1-54:3961 |
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