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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:141273..143751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042087 ID=XLOC_042087|Name=XLOC_042087|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2479bp|location=Sequence derived from alignment at sc0000288_pilon:141273..143751- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCAGCTGTGAGCCATCTATTGAGACATGCCCAAATGGTTGGCCC
TACACAAGCAGCAAGACAATATGCAGTGGCCAAACGAAAGATGATTAGGA
AAGAGTATTTTGTTTACAGACCTAAGATGAAGTCAAGATACAGAGGCAAT
CCAAATCCCAGGTATGTATCAATTTCAAACCCAATTTTGTTTTTGGACCT
ACCCCGGTGGAGGTCCTATAAATTAACCGTTGTATGTTCGTCCGTTCGTT
CGTCCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTTCTGATTTT
TTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGAT
TTTCGAAAAAAAAAATTTAGGCAAATTTGGGCCAAAATACGTAAAAAAAC
GGGATCATTAATTTTTTCTAATTTTTTGCATGACAGTAGGGTACCATTAT
AGGTAAAAGATGGCTCAAGCAGATTTTTGCAAAAAAGTTTTGTTGGCTCA
AAAAACGCATGTATATCTATAAGAATCAATATTAATAAGCATACATCAAT
GTTCTTAGTCAAATTACTCAATTTTTTTATGAGATGATGTTTTTTTGCTC
ATGAGGGCTTATTTTTGAAGAATGTGTGTTTAGACATGAAATTTTGGTTG
CTTGGCATCTTTTTATAAAAAACTGGCCAAATTCGATATTTTTTTATAAG
CACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATGATTTTTTGCA
CAAAGACGCGTAACTATAAATCCTCGAATGTGACGGAGCCCGATTTTCGA
AAAAAAATGTATTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGG
ATTTTTGGACTTTGTGAAAAATTGGATCATAAATTTTTTCTAATTTTTTT
GAATTAAAGTAGGTAAAAGATGGCTCAAGCAAATTTTTGTAAAAAAACGA
ATTTTTCAGCTCAAAAAACTTATCTTTATCTTAAATAGGGTCTTGAAAAT
TAAAAAGAATCCCTACCACGTATTAGTAATAACCCTCTTCAAACTGAACT
AAAGTGTATTGGTTCACAGTCCAAACGCTCCTAGATCAAGAGTTATGGAT
TTTATTTATGGTCAGAAAATTATTGTGTCCAATTTTTGATAGATAATTAA
CCTCATAACAGATCATCCATCCTGTGCATACCACGCTTTGCTCTAAAGGG
GTATGTTGAATGTGACGATCTTACCGTTAAGAAATTAAAACATTTAAAAC
ATTTAAACTGATTGTAAAATAATTAACTGTCATCACAATTGAATTTTAGT
CTCTAAAGCTTGAAAGATAGTTAGTAGTCAACGCATGCGATATAGCGAGT
TCAAGTAATGGAGGTAGAAAGCCATTTTGACAGCCCGAAAAATATTTTGT
GTATTAAAATGGAGCTTAGACTTTGAAAAAAATCTTTTAAAGCATTTTGA
TTTTCAAAAACCTGAAAGGTATTGTTAGGTAAAACACATTAAAGTACGAA
GATGGTAATGGAACTTGGATTTGTCTTTGAAACTGTTACTTTTATAAAAC
GAAGGATAATCCGAAAAATTTCACCATCATAATCTTAATTAGAAAAATGA
CGATAAATGTTGTTGTTAAAAATTCTATATTTCGTGTACATCTAACACAT
CTTTCAGGAGAAATAAAATTGAAATTCACAAATCTGCATCTTATGTTAAA
AAGTAGAGAATAATTACAGTAATTAAAATCGTAAAAAATCGTAAAAAATC
GTAAAAAGTTCATTCAAAAAAGATACAAATCCCTAGACGCTTTCAAGCCA
TTGTTTAGAACTGGCTTGAGGCGTTTGATATATAAAGCTTCTTTGAATAA
GAGAGAGGACCAATTATCACTTGAATCAATAACTTTTGTATTGTCATTAA
CAATGTTAGTTACTTTTATCAATCCATCCATTTTGTTCTTTCTTTCCAAT
TCAGGTTAAAGTTGTTGCTTTTGGAGGACGTGGAAAACATTGGCATGAGA
CATGATATTGTGGAAGTCAAACGAGGGATCGGTAGATGGGATCTCATACC
AAACAAACTTGCAGTCTACGCTACCGAAGAAAACCTCGTCAAACTCGGAA
TGGACCCTAACCGCTTAAAAGAGGATAATTCGATAAAAGTACCGTTAAAT
GTTCTGAAGTATTTACAGAAACATGAAATCAAACTTGTTACTCCGCAAAC
TAGTGACCTTGACCAAAATTGGTTAATTTCCTTGCATGATATTTCAGAGT
ATTTTTTCCGCGCGGGAAGATTACGCGTTCCGGTGACATGTATGAACGTT
ACGGAAAGCATGGATAATGTTATACGCGAAGTCGGTAAATACACGGTACA
AGTGACGTTAAATAATACAATCACCGTTGACGTTCCTCTGGTAGTTACGG
AAAGACCAATTGACCCGGAAAAAAATTAA Coding sequence (CDS) from alignment at sc0000288_pilon:141273..143751- >XLOC_042087 ID=XLOC_042087|Name=XLOC_042087|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000288_pilon:141273..143751- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCAGCTGTGAGCCATCTATTGAGACATGCCCAAATGGTTGGCCC
TACACAAGCAGCAAGACAATATGCAGTGGCCAAACGAAAGATGATTAGGA
AAGAGTATTTTGTTTACAGACCTAAGATGAAGTCAAGATACAGAGGCAAT
CCAAATCCCAGATGTTTTCAGCTGTGAGCCATCTATTGAGACATGCCCAA
ATGGTTGGCCCTACACAAGCAGCAAGACAATATGCAGTGGCCAAACGAAA
GATGATTAGGAAAGAGTATTTTGTTTACAGACCTAAGATGAAGTCAAGAT
ACAGAGGCAATCCAAATCCCAGGTTAAAGTTGTTGCTTTTGGAGGACGTG
GAAAACATTGGCATGAGACATGATATTGTGGAAGTCAAACGAGGGATCGG
TAGATGGGATCTCATACCAAACAAACTTGCAGTCTACGCTACCGAAGAAA
ACCTCGTCAAACTCGGAATGGACCCTAACCGCTTAAAAGAGGATAATTCG
ATAAAAGTACCGTTAAATGTTCTGAAGTATTTACAGAAACATGAAATCAA
ACTTGTTACTCCGCAAACTAGTGACCTTGACCAAAATTGGTTAATTTCCT
TGCATGATATTTCAGAGTATTTTTTCCGCGCGGGAAGATTACGCGTTCCG
GTGACATGTATGAACGTTACGGAAAGCATGGATAATGTTATACGCGAAGT
CGGTAAATACACGGTACAAGTGACGTTAAATAATACAATCACCGTTGACG
TTCCTCTGGTAGTTACGGAAAGACCAATTGACCCGGAAAAAAATTAAGTT
AAAGTTGTTGCTTTTGGAGGACGTGGAAAACATTGGCATGAGACATGATA
TTGTGGAAGTCAAACGAGGGATCGGTAGATGGGATCTCATACCAAACAAA
CTTGCAGTCTACGCTACCGAAGAAAACCTCGTCAAACTCGGAATGGACCC
TAACCGCTTAAAAGAGGATAATTCGATAAAAGTACCGTTAAATGTTCTGA
AGTATTTACAGAAACATGAAATCAAACTTGTTACTCCGCAAACTAGTGAC
CTTGACCAAAATTGGTTAATTTCCTTGCATGATATTTCAGAGTATTTTTT
CCGCGCGGGAAGATTACGCGTTCCGGTGACATGTATGAACGTTACGGAAA
GCATGGATAATGTTATACGCGAAGTCGGTAAATACACGGTACAAGTGACG
TTAAATAATACAATCACCGTTGACGTTCCTCTGGTAGTTACGGAAAGACC
AATTGACCCGGAAAAAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:141273..143751 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 163-636:475 |
| Aaloc | 1-159:2480 |
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