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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:304125..311495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042082 ID=XLOC_042082|Name=XLOC_042082|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7371bp|location=Sequence derived from alignment at sc0000288_pilon:304125..311495- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTGGCACTAAAGCTGGTAAGTTTTTGGTCTAATACCCGGTCGGT
ATCGCATCTTTCGATAGCCTGTAGATACAAGGGAGTCTCCATAACTCGAA
CAAGCACGGAGAACACAAATTTGTTCGAGTTAAGGAAATTTCGAGTTATG
GAGTAAGGTATAAGGCATTGTTAACAGAAGGGACGAGTAAACTTGCTCGA
GTTATAGAGGTTCAAGTTAAGGAAACTTTACTGTACTAGATTTAGTAGAT
TTGAGTTTCTGTTTAATGTCGTGCTCGATAACTGTGAAGAACGAATTCAC
AAATTTATTTCTGATTATTACGTCCCGTGATGATGGCCACATCAAGGCAT
GAAAGTTGAAGTAATGTACTTTTTTTAACCTGAAATTTTGAACTAAATAG
ATTTGAGTTTCAAGAAGTTTTCAGCCCAAAATATCACAATGCTTTTATGA
CTAATGTCTAATCTTTAAGGTCACGAAATTCACTAAAAGAATTTAAGATA
TTAATTTTGACCTTTGCTGTCGGATGTTAGTGATTTATAGATATATCACA
TAGGTGTCATCCTAAACGTCCCAAAAAAGTAAATTCAAAGAAACGTTAGA
ATCGAAAAAAGCTTTACAGTTTATCAGGCATTGAGCGAAATAAGCAAGAT
GTGAGTGAGCAGGAGTTGAATAAATACAAGCTAGTTCTGTACGTACACCG
CCTTCTCACAGACCCGGTAGTGGTGGTGGTAAAAATAACGGACCAAAACT
CGATATGGATTGACATTCCCATGTTTTGAAAGGCTGGGGATATGAATTCC
ATTGTTTTCGAGCCATAAAATTCAGTGGGGATTGAAAAAATTGAACATTA
TTTTGCAGTGAGGATTTGCTTATCTGATTATTTTCAGCGGGGACAAAATA
TAGGGTATAATTTCCGACTGGGGACGATATTTTGGGTTCCCAGTGGGACT
GTGAGAAGGGGTGTGTATGTTGGAAAGATATCCAAAAGAGAAGGATCTCG
GAGAGATGGTCTACCGTTCTAGGGTTTGATATCTTCAGTATGCTTGTGGT
ATGAATCTTGAAGGTTTAATATAAAGTAATTTCAGTACATAGCATTTTAT
CGTATTTTTTGTAACATTACGAATAGTTAGAATGGTTAATAATAATCTAA
CATAAGGGTACAGCAGTGTAACAGGAAAGCAGAGAATAAATACAAGAGAA
GTACTTCCAAATTTCAAAGCAGATCAAGTCAGCATCGTTTCACTTACTTT
CCAGAGGAGATACTTCCAGTATTTGCTTCAAATTGACCAAGACTGTCGGT
AGGAACGGGTAATGGAATGCTGACCCAGTTGCGTCCAGTCCCCTCCACAT
CGCCAAAGAAGATGGTCGAGAAACCTGCAAAAAGAAAAATTCATTATTTC
TTATCATTGATTTTTGTATTTTTCGGTTTTGAGATCGACCCGTCAGCCCA
GTTCATAACAAATTTAGACGAGGGTAAAATGCCTCTTGTGACTCTTCACA
TAAAGTTTTTTATTTTTAAGAAAGAAAATCAAGAACAGCTTTATATTATA
CAAATTTGTGTAACTTTGAAACTTTAATTTGGATTAAAGAGAAAAGGGTG
CTAAATTACCTATCAATCAAGCCTATCAATATCTATCAATCAAGCTTTAG
CTTTTTAGCTGCAAACTGCATGGAGAGATGCGTACGATGGATCTCAGGCT
TCGAAAAAGGAATTGGGTGAGGGCTAAGTAAGCATACAGACAGTCTGATA
TAAAATTTTATTATCTGCAAAAGTGGTATCCTTGGGACAAGGATAAATAT
TTATTGAATTTCCAGGGTAGTTTAAATCTTCATGAATTGTATTTGCTTTC
TTCTTTTCAAGATAATCCAATACCAGAAAAGGAACTTTTTCAAATAAAAC
TTTTCGTTTTACGTGGCTTGAACTTGAATTTTCTTTTTTATGAATGCATA
CCTTGTTGAGTTTTATCCGAGAAAGATAAGAACCTGACAAAGTCCATCTC
TACTGTCTTTGGTAGTTAGTTTTCTTAGGAAGATTCCTAGGAAAACATCT
TAAACAAAAGCGTACCTTGCCAGAGAGTTTTAAATGTTTCTTATCTCCGT
TAGTAATTTAGCAACGTGTTGATAGAAAACATGCAAGAATTATGAAGTGA
TAAAAATCTTATCGAAAATATATCAGATACACGATCATAAAAGTTTACAA
AAAAGTTTTATGGAAATTTAGACTTGTAGTAAAACAGATCCAGTAAATTG
GGAAAAAAACCTTTCTTAGATGTCGTAGACCTCAAAACATAGTTACATCG
TGCGTAGTACAGATGCATCTGAAAAGATTATATACTGACGCCGACAGACA
ATTTGTGACGATTGACAGACTAGGGAAAGTGCTGTTGATGCATGTTTGTT
TATGAAAGGCATCAAATGTCAACAAAAATATCACAGAAAGAAATATAAGA
TATACAAAATACAAAGATTAAACAGCACGTCCTGTTGAACAGATTTTATA
CTCAGCTAGAGGAGACAGTGTTTTTTTTCTTGAGGGAGTGAACCCACAAC
CATGGTAAGGCTCTTTTTTTCCACACTTATTTTTTTCAAGGGAGAAAACT
TTAAAAATCTAGAGAGAGATTTGCTTGCAGTAGCACTCTTTTCCCTCGAA
ACTCAAATTTTCTTTTTTGGTGAGAAAAATGACAACTTCAAATTTTGGGA
ATGTAAAGAAAGAGCTAACCTTTGAAGTAACACTTCCTAAAGTGAAAAGT
ACATTAAAGATTCTTAGCGCATTTACCTGTTAGATATAATAGTGTTTTTT
GTTCACTAAAAACCCTTGAAACCACCCTCAAAACACCTGTCTAAGAGGAC
AGTACTGAACAGATAAGATCTAATGTAAATTTATGAAATTCTGTTTTTCT
CAAATGTAAATATTATTTTGAAACTTTGTTTTTCAATACGTTTTTTTATA
AGAAACCTTGACTTTGCTCCGAGCCTAGAGTTCCTTATTTTTCCAGAGAA
TTTCAGCCTCAAAGTTCCTTTTCGAGTTACTTATTTTACTAAGCTGCTAA
GATCGGCTTTGCTAACTGTAAAACTTTTTTATAAATATAACAATGGACTA
AAGTACAGAAAAACACGTTTATTGAATGTTTTTTCATCAATATCTTGTCA
TCTTTTAGTTTTAGCTTTTGTAAATGTGTGAAAGTTCAAAATTAACTCTT
GTTTTCTTATTCTCAGCCTGAGCAGTTCCTTAATAATTCCTTATTTCTCG
GACTATTTTCAGCCTCGAGTTCCTTATAAAGGTGTTTCTTATAAAAAAAT
TGCATTATATGAAATTGATAACAAAGGCTATAGGAGTTTTATAAAAAATT
ACAGATGGAAAAAAAGGATTTAAAAAGCAGAAGAAGAATTCATGTGCTTA
ATCTCTAATAATTTTCTATCTCTTATTATTTTCATCTTCTAAATTTCTTT
TGTTTTCATATTTTATATCCAAGGTTCCTTTTATCTCCATAACTTTTCCA
TCTTCTCTTTCATTCAAAACCTTAAAAGCTCGGAGTGTCTTCTCCCATGT
TATAAGAAGGGGTGGATTAATTTAAAGTACAAAATTGGATTTGGTTTTTC
AGGGGTTTCAGGGTTTTACTCTTCGTTATGTGGTTACAAGTCTGTTTTGG
TTTGTGAAAGTTTAAATTTAATTTAGGTTCAGTAAAAATCATTTTTTAGT
TTAGAAGAATAGAGCAGAAAAAGTGAAATTGAAGAATTTTTATGTGAAGA
TTTATTTGTGATCATTTGGGGTAGAGTACTATTGTATTGTGTTGTTTTGT
TGTTGTCTTTCTTCTTTCATATTTTTCCCACGACTTTTCTTATTAATTCT
TAAAAAATTTCATTTCGGTGGTTTTTCTTCGGAAGAAGACTCGTTAAAAA
GACAGAGGTTTGATGGACAATAGAGTTTTCCTGGACTAAAGGACGAAGGG
AAATCGCATGGTGTTCAGTGAAGGATATAGTGACTGACTATATGATAGAA
ACCTTCATCATTACCAAAGATCAGCTAAGAAGTAAGGATGAAGTACCAAA
GATTAGGAGGTCTGTACCCCAATTTCAAAGTAAGAGAAGATTATTTTTCA
AATACTCATCAATTTAGTGGCGAAGTAGCTCGGGCTCCACTTACACTGGA
TAGCGCGATTAAGGGCTTCACTGGACTCAGCGTCATAAGAAATTATCAAA
AAGCAAAGTTAAGCCAAAAGTAGACTCTAGTCTAGTGACGAAGGAACAGA
TAAACATAAAAGAACGAAAGAAGGCAGACAGTGAAAGATGTGTGACATAA
AGAGACCGCAAGACTCGTCGTCGAAGGGGGGGGGCGTTATGCACCCTTGT
TTGTTTACTTTGTAGTACTGTCAATACCAAAACAGATCACACAGCATTGA
TCAAACGTTCATAACGACGTCCAAATAATGTTAGGTAGACGGTGGACTAT
AACGTTGTGTGTCGAATGAGTGAAAGATTGAAAAGGCGGTTGGAATGGAA
AAAGAAGAGGCTATTTGATGAAAAGAGACATTGACGTATCATGAATGAGA
AATGATAAGTTAGTGTTCGGTCATGAATGTGCAGTGATTTTTCAACGGAG
AGAATCGTGATGACATGGAGATTGAGATATTGTGCGTGTCTGTGAGGAAG
TAGCAAATCAAGAACGTCAAACCAAGATTGCATCTTTCCTTAATCCCCAT
GTGATGAAAGAATGTGCCAACAAATTATTTTTGTTTATGTGTTCTTTATA
AGAGAAAATATTTCAGTATAGAAGTAAGATTACATAGGTTAATAAGGAAA
TTGAGGTCTGGAACTGTTTAAGGTAAACTGAAATGTCGAGAAGAAAAGAT
AAAGAAGGATAGTATAAGAACTTGTACTGTCAAAATCACTTCACCCAAGA
TTTCTGGATCAAACCTTTTCGTTCCTATGCAGAGTATTGCATTGACCCAT
CATAGGAACGCCTATTACCATGTCATTTTATCTACAGTGACGTTTCAAGT
GATTAATTGGAGCTCTTTTGTGAATTAGATTTTTAATTGCATTCCAGTAT
GCTTCTCGTTTCAAAACAATTGGCAAGTTATTAATCATACCAAAAGTTGC
AATTAAAGCAATAAATAGATCTGTTTTCTATCGAAATAAGTGTATCGTTT
TATTTTTGCAGATAGAAGAAAGTTTTCTTTGAGTAGCATAAGTGGGTGGT
GCCTTACTGAAGAAAACAAACAAAGAAGACTAAGCAAAGTCTCAGAATAA
AAAGTCGATAGTGACAAAAAGTGATGATCTGAAGGCTCAATATATTACAA
TTGAAGATACTGGTTGATTGAATCTTAAATCAAAAATCTCAAAATTCTAC
TTTCCCAAAAACTTTAGATCGCTTTGTTGTTAACTTTTCGCATGTCTTCT
ATTTTCAGAAAGGTACACAAATCAAATTTCGCAAAATGGCGCAAACGAAC
GGTCACGACGCATCCAATGGCATTGTCTTCGGTCTCATGAACCAGCAAGG
TAAATACCTGACCGCTGAGAAGTTCGGCAACCAAATTAGTGTCACCGGAA
CCTCCCTCAGATCCAAACAATTATGGACTTTCGAACCAGAAGGTGCTGAA
TCAAGCAAAGGGTATTTGAGGAGCCCGCAAAAGAACTACCTGGAGACTAC
AAAGACAGGGACGGTCACTTGTGAGGCTGAGGAGAAGGAAGTCTCTCTAT
TGTTTGACGTAACGGTGGCTGATGATGGTCGATGGGCTTTCAAAGATTCG
TTTGGGAAATTCCTTGCAGGAAACACTGAGAGGTTGTACACAACTATGGA
TTCTAAACAAGCTGATGAGTACCTCTGGGCCATCCACATCGCTGGTCACC
CACAATGCAACATGAGAAGTGTCTCACGCAAGCGATTTGTTCATTTGAAG
GATGACCAACTGTGCGCCAATGAAGACATCCCATGGGGTCACGATGCTGT
CATCACACTTGAGTTCCACCGAGGGAAATACGCCATTCGAGATAGCAACG
GTCGTTATTTGAACGGAGAAAGTGGAGAACTGGAAACGACTTCCACAGAA
GAATGTATGTTTTCAATTGCTTTACAAGATACAGAATTCGCTTTCAAGAG
TTCTTCAGGAAAATATTTGACGGTGTACGGTCCAGCGGGGAAGTTGATCG
CTAACAAGAAAGCAATCAGTCGGGATGAACTTTTTGCATTGGAACAGAGC
AAAGCACAAGTCATGTTAACAGCAAATAATGGAAAGACCGCTTCCATCAA
GCAAGGTAAGTGTCTCTTTCTTACAAATACTCCGCTAGTTGTAGGTACAA
TACACCCAAACTCGCAGGAATACACTTTTTGGAGCTGGAGGTAGCAAACT
TTTGGGATTCTTTCATCTTTTTCTTCCTTCTATCATTCATTTTACACATC
ACCTCCCCTCCATTTTCTTCAATGATTTCTCGATTTTTTTAAAGATGAAA
CTTGGCTTCATACATGGTTTCAAAATCCAATTAAACTCGGTCCAAAAAAA
TCACATTAAACTGAACCAATTAAAGAAATTCTTTGAAATTCTCTCAAAAT
GACGCAAACCTTATCTTCGAAAACGTCATTAATCTAAACAACTTAAAAGT
TTAAAGGTAACATTTGAATCCAAAGCTTCTAGCTCCCTTCTCCCTTCAGT
GTACTCTTGAAGTAGTAGCCAACAGACAATTTGCATTCTTTTCTCCTCAG
GAATTGACGTCACAGCAAATCAATTCTTGGAGCTTGGTGATTTCGGAGAT
ACGGAGACTTTCCAAATGGAGTTCATAGATGGGCAGCAAAACCAAGTCAC
CTTCTTATCAAAGAACAAAAAGTACTGGACCGCTGGAAACAAATCCGTGA
CGTCATCAGCTGATCAGATCAGTCCTGAGTGTATCTTTGAATTGGAGTAT
GAAGGAGATAAGATCGCATTGAAAGCACATAATGATAGATACATCACATC
AACGTCCGGAGGGAAGTTGGTTCCAACCGGTGAAACGACTTCAGATGCCA
ACACTTTGTTCTTGATGCAGTTGATGAATCGACCGATCTTGGTGTTGCGA
TGCGAGCATGGTTATGTTGGATTGATCGATAGCAATGATAAAGTTCAATG
CAACAGGGGTGGTTATGACGCAATGCTGGTGGAAGGGGATGGCCAAGGAA
GATATCGATTGAAGACATCCAAGGGAAAGAGCTGGAAGGTGGATGGCACC
TCACATTTGGTACAATCCAGTGATGAAGGTGATTTATTTTTATTTGAACT
TTGCAGTAAGAATAAGATGAGGATCCAAGCCTCTAATGGAAAATATTTGA
AAGGTGACCATAATGGCGTCATCACTGCAAGTGCTGGTAAAGATGATCGT
AACATCTTGTGGGAATATTGA Coding sequence (CDS) from alignment at sc0000288_pilon:304125..311495- >XLOC_042082 ID=XLOC_042082|Name=XLOC_042082|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3078bp|location=Sequence derived from alignment at sc0000288_pilon:304125..311495- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTGGCACTAAAGCTGATGAACTTGGCACTAAAGCTGAAAGGTAC
ACAAATCAAATTTCGCAAAATGGCGCAAACGAACGGTCACGACGCATCCA
ATGGCATTGTCTTCGGTCTCATGAACCAGCAAGGTAAATACCTGACCGCT
GAGAAGTTCGGCAACCAAATTAGTGTCACCGGAACCTCCCTCAGATCCAA
ACAATTATGGACTTTCGAACCAGAAGGTGCTGAATCAAGCAAAGGGTATT
TGAGGAGCCCGCAAAAGAACTACCTGGAGACTACAAAGACAGGGACGGTC
ACTTGTGAGGCTGAGGAGAAGGAAGTCTCTCTATTGTTTGACGTAACGGT
GGCTGATGATGGTCGATGGGCTTTCAAAGATTCGTTTGGGAAATTCCTTG
CAGGAAACACTGAGAGGTTGTACACAACTATGGATTCTAAACAAGCTGAT
GAGTACCTCTGGGCCATCCACATCGCTGGTCACCCACAATGCAACATGAG
AAGTGTCTCACGCAAGCGATTTGTTCATTTGAAGGATGACCAACTGTGCG
CCAATGAAGACATCCCATGGGGTCACGATGCTGTCATCACACTTGAGTTC
CACCGAGGGAAATACGCCATTCGAGATAGCAACGGTCGTTATTTGAACGG
AGAAAGTGGAGAACTGGAAACGACTTCCACAGAAGAATGTATGTTTTCAA
TTGCTTTACAAGATACAGAATTCGCTTTCAAGAGTTCTTCAGGAAAATAT
TTGACGGTGTACGGTCCAGCGGGGAAGTTGATCGCTAACAAGAAAGCAAT
CAGTCGGGATGAACTTTTTGCATTGGAACAGAGCAAAGCACAAGTCATGT
TAACAGCAAATAATGGAAAGACCGCTTCCATCAAGCAAGAAAGGTACACA
AATCAAATTTCGCAAAATGGCGCAAACGAACGGTCACGACGCATCCAATG
GCATTGTCTTCGGTCTCATGAACCAGCAAGGTAAATACCTGACCGCTGAG
AAGTTCGGCAACCAAATTAGTGTCACCGGAACCTCCCTCAGATCCAAACA
ATTATGGACTTTCGAACCAGAAGGTGCTGAATCAAGCAAAGGGTATTTGA
GGAGCCCGCAAAAGAACTACCTGGAGACTACAAAGACAGGGACGGTCACT
TGTGAGGCTGAGGAGAAGGAAGTCTCTCTATTGTTTGACGTAACGGTGGC
TGATGATGGTCGATGGGCTTTCAAAGATTCGTTTGGGAAATTCCTTGCAG
GAAACACTGAGAGGTTGTACACAACTATGGATTCTAAACAAGCTGATGAG
TACCTCTGGGCCATCCACATCGCTGGTCACCCACAATGCAACATGAGAAG
TGTCTCACGCAAGCGATTTGTTCATTTGAAGGATGACCAACTGTGCGCCA
ATGAAGACATCCCATGGGGTCACGATGCTGTCATCACACTTGAGTTCCAC
CGAGGGAAATACGCCATTCGAGATAGCAACGGTCGTTATTTGAACGGAGA
AAGTGGAGAACTGGAAACGACTTCCACAGAAGAATGTATGTTTTCAATTG
CTTTACAAGATACAGAATTCGCTTTCAAGAGTTCTTCAGGAAAATATTTG
ACGGTGTACGGTCCAGCGGGGAAGTTGATCGCTAACAAGAAAGCAATCAG
TCGGGATGAACTTTTTGCATTGGAACAGAGCAAAGCACAAGTCATGTTAA
CAGCAAATAATGGAAAGACCGCTTCCATCAAGCAAGGAATTGACGTCACA
GCAAATCAATTCTTGGAGCTTGGTGATTTCGGAGATACGGAGACTTTCCA
AATGGAGTTCATAGATGGGCAGCAAAACCAAGTCACCTTCTTATCAAAGA
ACAAAAAGTACTGGACCGCTGGAAACAAATCCGTGACGTCATCAGCTGAT
CAGATCAGTCCTGAGTGTATCTTTGAATTGGAGTATGAAGGAGATAAGAT
CGCATTGAAAGCACATAATGATAGATACATCACATCAACGTCCGGAGGGA
AGTTGGTTCCAACCGGTGAAACGACTTCAGATGCCAACACTTTGTTCTTG
ATGCAGTTGATGAATCGACCGATCTTGGTGTTGCGATGCGAGCATGGTTA
TGTTGGATTGATCGATAGCAATGATAAAGTTCAATGCAACAGGGGTGGTT
ATGACGCAATGCTGGTGGAAGGGGATGGCCAAGGAAGATATCGATTGAAG
ACATCCAAGGGAAAGAGCTGGAAGGTGGATGGCACCTCACATTTGGTACA
ATCCAGTGATGAAGGTGATTTATTTTTATTTGAACTTTGCAGTAAGAATA
AGATGAGGATCCAAGCCTCTAATGGAAAATATTTGAAAGGTGACCATAAT
GGCGTCATCACTGCAAGTGCTGGTAAAGATGATCGTAACATCTTGTGGGA
ATATTGAGAATTGACGTCACAGCAAATCAATTCTTGGAGCTTGGTGATTT
CGGAGATACGGAGACTTTCCAAATGGAGTTCATAGATGGGCAGCAAAACC
AAGTCACCTTCTTATCAAAGAACAAAAAGTACTGGACCGCTGGAAACAAA
TCCGTGACGTCATCAGCTGATCAGATCAGTCCTGAGTGTATCTTTGAATT
GGAGTATGAAGGAGATAAGATCGCATTGAAAGCACATAATGATAGATACA
TCACATCAACGTCCGGAGGGAAGTTGGTTCCAACCGGTGAAACGACTTCA
GATGCCAACACTTTGTTCTTGATGCAGTTGATGAATCGACCGATCTTGGT
GTTGCGATGCGAGCATGGTTATGTTGGATTGATCGATAGCAATGATAAAG
TTCAATGCAACAGGGGTGGTTATGACGCAATGCTGGTGGAAGGGGATGGC
CAAGGAAGATATCGATTGAAGACATCCAAGGGAAAGAGCTGGAAGGTGGA
TGGCACCTCACATTTGGTACAATCCAGTGATGAAGGTGATTTATTTTTAT
TTGAACTTTGCAGTAAGAATAAGATGAGGATCCAAGCCTCTAATGGAAAA
TATTTGAAAGGTGACCATAATGGCGTCATCACTGCAAGTGCTGGTAAAGA
TGATCGTAACATCTTGTGGGAATATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:304125..311495 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 871-1539:670 |
| Aaloc | 22-867:1964 |
| Aaloc | 1-21:7372 |
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