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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:442928..448076- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042078 ID=XLOC_042078|Name=XLOC_042078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5149bp|location=Sequence derived from alignment at sc0000288_pilon:442928..448076- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAGATGGTTGAAATTTTGTAAAAGTAAGGTGTAATAAGGACAAAAAAT
CTGTCTCGTTCTCTTTCTTTTACACAATTTTTTACCGAATGAGTACAACA
CACAATTTTATTAATTTTATTGAAATTTCTTCTGTTCCAATAAAATTGGG
CAGTCCAAATTAGAAACGTAGTAAAAAAAACAGTTACTTTCAAAAAAACA
GTAAAAAAAATTGGCAGGTCAAATGCATAGTTTTAAAACAATCTTTGTAG
TAACCATCAAAAAAATTTGACTATTTTGAGTTTTTTTAGAAATTTTCGCG
ATGGGCCTTTTTTTCAATGACTTATTTCGCGAATGGCCCCAAACCGCGAA
ATGAAAATTAAAAAAATTCTTATATTAAAGTTCTATTTGTTTGATTTTCT
TTATTTTGCAAGAAGAGCGCTAATTTTTGCGATTTTGGATTGATCTTTAA
GATCCTTCATTTTGATTTTCAAAGTTTATAATCCTGAAATAGTTACCCTA
AAAAAAGATTTCCCTTTACAAGTGAATGAAGACTTTCTGGCATGAATTTA
AACCCCCTTCAGTTCCGTCACTGACAAATGTGAAGAAATAACTATTGTCA
GAGCAATACGCTTTTTTCATTACAAAATAAACTTTGGCATGAAAATAGAA
AAAATAAAATATCTAAGAATATCAATCATGGAATTTGCACTAAAGCTAGA
ATCCAGTTTAAGAGCTTTTTCAATTATAAAGTTAAATTATCCCAGTTAGG
CTCTCCTTTCAAACGCCATGTTATGCTTGACGTATTGATAAATGTTAACC
TATATAAATTAGGATCCCAACCTCAGAATGTGCTGTAGACTATTTAGGAT
GATTTTTTGTTTGCTGATCATAGTTCACCATTCTTCGCGTGTAGTATAAG
TGCTCGGCTGAATGCGCATCTGAATCTGCTGTTGTTTTCAAGAAAAAAAA
TGTAGCTCTTTAATGATAAAATTTATTGATTTGTCGTTAATAGGTTAATC
CTTCCTCGTTGCTTTTTAGACATTAATAATGTCTTGATAACCACTTGCAT
TATCAAACTCATTGTGCAGGAAAGATCAACAATAAGAATTTAAACAAGGC
ACAAAAGGGGACTCGAAAATTATGGTGCCTCGAAATGCCTTCACAATATT
CAGTGAAATCCCTTTTTAGAAATTGAGATAGTACATCAAAAATAATTCTG
TGAAAATTTTCAAGCCAACACCTTCAAAATTTATCATTTAAACTGACAGG
AAAGTTGTCATCTTGAATAAAGTTCTTAGAATGTTTAATTTTGGCGAAAA
ACTATCGTTTTCAAAAATACCCCGAAAAATGTCAAATCAGTTCAAGTGTT
CTTGGTACATAAAAGATATCTAGAAAAAAAACTTTTTTCTGAAGAAAATA
AGAGAAAATTTCAAAAGCTATATACCATAATAGGGGGGTTTCAGGGGGTA
CCGATTCCGCAATCCGGCAATTTTCCTCCAATTTCCGTCAAACCGTCTTA
AATTGAACCAAAATTCGTCACCGAAAAATTCTTTAAATCAATTTTTTATC
AAAAATTCCGCAAATTTTTGAATGCTTTTACCAATTCCGAATTCCACAAA
TTTTTTGCTAAATTCCGTTTTTTCCGCACTAAAAAATGACTAATTTCCGT
ATCCGTCAGAGAACCCAATGTCCGTAATTCCAGTAAATTTTCGCCAAACC
GCCGCCATCCAAAAAAAATGCCGATCCCGCTCTCCGCCAACCAGGAACCC
CCCCCCCCATAATAAAACTGACATCTTGATGTGTTCTTAAAAGCTCAGAC
AGAGGAAAGAGAAAAGTTTAAATATCTTAATCATATTTGACTGTCATTTA
ACCTTATTCATTTCAAACATCAGACAAAAAGAGACTTGATCGGTTTCAGA
AGTGAAAAATGTGTCATTTTTGTGAGTCTTTACTAAACTCTTATTAATTT
CGCTTAGCGAAAGTATTACGATAGCCTTTCTGCGGCGGCGGTCATCGGAA
AAAAAAATTAGAAACGAAAGTGCTTGATTACGGTGGACGAACTCACTAAA
TTTAATTTACAAATTACACGCTCGTAAACCAGGACGAGTTTTCGCGGTTT
CTTTGGATTACGTCATAGACTTTTGGGCTTAGCTCCACAGTTTTGATTTT
TTCTTTATTTTCTTTATAAGCATATACTTTATAAGAATCAAATCAAATAA
CGCTCGATAGACGGTGATATACCTTTCGGTAATTAGTTTTTACAAGCTTT
AACTTACGCATTGAGTTTAATTGTTAAATAATTGTTGACTCTGGTAAGAG
GTATGAAGGCACTCTTATATTCACCGTAAAGCCACTGTGGTCTTTGGAGT
GATCGGTGTTGCCAAGTACCTCTAATACTGATTTTTTAAATTTCTATTTG
TTTTTTAATTTCATCCTGCGTGAGGAAAATAATAGTCTTTCCTCTCCCAA
ACCCAAAAAAAAGCACGTTTGAGTATGACCGATTTCTCGCGAGAAATTTT
TTTAACTAATTTTCACCAATAGTTGCTGAGCATTTTTTCGCGAGTCAAGA
CATTATTGTTGAAGGTTTTCAACAAAGAAATTATGACAAATTTATACATT
TAATAAGGAGAAGAAAAATCAAAATTCAACTAAAATACTTTCACCATATT
TTTTAATGGCATTAATTTTAGTGTCCCCTTAAAAATTTTAAACATAATTT
TTACGAAAAAGGCCTAAATTTAAGAAATTTCTCTCGCAAAAGTAATTTTG
TATACAATCCCTACAAGTTTCTGAAAAAATAGAAAGCGAAGCGAAGCGAG
TGTATTAAAAGGAGTAAGAAGTCGTTCGGAGACGCCGGGACGGCTAGTTT
ACTTATAAGAACAATCAATAACTCTTGATAGACGGTAATATACCTTTCGG
TAATTAGCTCTTAAAAATAAACAAAGATGCGCAAAATATGAGATAGCATT
TTTCTTATATAAGCATTTGCTTTATAAGAATCAATAATACCTTTGATAGA
CGGTGATATTCCCTTTGTTTATTTTCTAAATTAAACAACAGTTGTTCTTA
AATGGTCTTTTTTTTAGCGATTTTAAGAGCGTTGTTCTTGTAAAATTGTT
TCATCAAGGCTCGATGTAAAGAGATTCAAATGGCTTCAATCTCTCTTCTT
GTTTTTCCTATTGTATTTAATTAGGGAAAGGCGAAATGTCGACTTTAAGT
CGTCTTATTAAATTTGTGTTGATAGAAAGTTTTAAGCAATTTTTGTTGAT
AGTGAAAGTTTTGACTGATTTTGATCATGGTACATATGGGTCAATTGTTT
TTGTATTTAATGTACGTAATTGCTAGATTTCGATTGTATCTGATGATGTA
TTTATTCTTTGTGGCTGTCAATGGTTGATTATTACAGACGGTTTAGATGT
TTAGAATCAGAAGCAGCCGGCGGAAAGATTTTTTGGAAATATGTGTTCTT
ATCTTCTAGGAGACCAAATGTTATGACTTTCAATTTTTCTATACAAATGA
TGTGTTCTAAATTCCAGGGAACTTTTATTGCACTCTAAAGTAATCATTGC
TTTATGGTTGGATGTGTTCTAAAATCTCAGAAAATATTTTTGCCGATATA
ATACGTGTAAGATGATAAGATGGTAAGATATGTATTCTAATGTGTTCTGA
ATTTTTTTAGGGCTTTAGGCAACACGTTAATTGTACCCCTGTCTCGTCAG
AACACATGATTATTTCTAGTTGATTGATTTACGAAGTCCTAATCAGAACA
TATCCAAATTTCTAGCTGAAACATACTCTCAGAACCCCGGGGGGGGGGGT
ACTTCCAAAGTCCCGCTAAGGGTCGGAAAAATCAGAAAATCAAATTTCAG
TCCCAGTCAGGGTCGGAAAAAAAGGAAAATTTCAACTTTTTACCCCCTGA
AAGATCGAAATTTTGTCAAAATTGGTCAAATTAGTCCCGCTAAGGGTCGA
AAAATTCCCAAAATTTTCCTTTGTTTTCTCCTTTTTAGTCCCAGTAAGGG
TCCAAAGTTCGAAAGTCGGGCGGCACCCCCCCCGTCAGCTCGCAACCCTA
GTCCCCCCCCCCCCGGGCTCAGAACACATCGGAAAAAAAGGTCACCTCGC
CGGCCCCTCGCCGGCTGCTTTCGTAGAATATGTATCAACTAATTTGATCG
ATCAAAGGTTTTCATTTTCTCTCATACACTAGATAATGTAACAGAATCAT
TTGGATGAAATTTTGGAAGCGAGGTGGTCGTAGAAAAATGAGGAAACCCT
ACCAATTTCTTTTGCTTCTTTCTACAGCAATCATCATTTTTCTGTTCGGT
GGAAATGTTTTCTTACGTGTGCGAAGACACGTGACTGGTCCACCACGTGA
GCATGTTGCCAAGGTGATGTCAAACAAAGAAGAATTTCCCGCCAGATTTA
CTAATTTCAAAACGAAACTTCAATATGCATATATGCATCAGACTTATTAC
AATTTAACTGATTCAACGAAACTGAAAAATAAACATACGAAGAAAGTCTC
TTCCAGGAAAATCAGTTACAGTGGGTACGGCGACACGACAAGTTGCAAAA
GACATAAAAACCATCCAAAACTAAAAGAGCTATTCGCACTTTGGATACGC
ATGGCGAATTTATTTAACGTAAGTTACGCATTAACACACGGTACGTTACT
AGGGGCGTTACGTGATGAAAATCTCATTCCTTATGACCACGACATGGATA
TCATGATCGATCATGCGGAGATTCCAAAATTCTCACAAATGATCGATACT
TCTTTTAATGAACATGATTATAAATTCCACTTAACAATCCAAAGAGAATA
CCAACGCTCCAATTACAAACGAAACCGATACTCATGTGAAGGCTATTTAA
TGTATCCCTGGTACCGAGACGTTTGCTCTTACATTGAACCCGTGGGTCGG
CTTGTCTACGGTCCACATTTGTATCTGGATTTAGTTGGATATAAAATTAT
TGGAAAATCATTATTCAATTTTCAGACTGAAGATAAAATACATGAATTTG
ATGTCAAAGATATGTTACCCTACACTGAATGTAATTTCTTAGGGTTTCGG
ACGTTTTGTCCGAGAAATAGTACGGTTTTAATGACCAAAGTTTATGGTTC
CAATTATATGGATTCGATAAAAAAGTGTCGAAATGGTGACTGGAAGTAG Coding sequence (CDS) from alignment at sc0000288_pilon:442928..448076- >XLOC_042078 ID=XLOC_042078|Name=XLOC_042078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000288_pilon:442928..448076- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAGATGGTTGAAATTTTGTAAAAGGAAGATGGTTGAAATTTTGTAAAA
CAATCATCATTTTTCTGTTCGGTGGAAATGTTTTCTTACGTGTGCGAAGA
CACGTGACTGGTCCACCACGTGAGCATGTTGCCAAGGTGATGTCAAACAA
AGAAGAATTTCCCGCCAGATTTACTAATTTCAAAACGAAACTTCAATATG
CATATATGCATCAGACTTATTACAATTTAACTGATTCAACGAAACTGAAA
AATAAACATACGAAGAAAGTCTCTTCCAGGAAAATCAGTTACAGTGGGTA
CGGCGACACGACAAGTTGCAAAAGACATAAAAACCATCCAAAACTAAAAG
AGCTATTCGCACTTTGGATACGCATGGCGAATTTATTTAACGTAAGTTAC
GCATTAACACACGGTACGTTACTAGGGGCGTTACGTGATGAAAATCTCAT
TCCTTATGACCACGACATGGATATCATGATCGATCATGCGGAGATTCCAA
AATTCTCACAAATGATCGATACTTCTTTTAATGAACATGATTATAAATTC
CACTTAACAATCCAAAGAGAATACCAACGCTCCAATTACAAACGAAACCG
ATACTCATGTGAAGGCTATTTAATGTATCCCTGGTACCGAGACGTTTGCT
CTTACATTGAACCCGTGGGTCGGCTTGTCTACGGTCCACATTTGTATCTG
GATTTAGTTGGATATAAAATTATTGGAAAATCATTATTCAATTTTCAGAC
TGAAGATAAAATACATGAATTTGATGTCAAAGATATGTTACCCTACACTG
AATGTAATTTCTTAGGGTTTCGGACGTTTTGTCCGAGAAATAGTACGGTT
TTAATGACCAAAGTTTATGGTTCCAATTATATGGATTCGATAAAAAAGTG
TCGAAATGGTGACTGGAAGTAGCAATCATCATTTTTCTGTTCGGTGGAAA
TGTTTTCTTACGTGTGCGAAGACACGTGACTGGTCCACCACGTGAGCATG
TTGCCAAGGTGATGTCAAACAAAGAAGAATTTCCCGCCAGATTTACTAAT
TTCAAAACGAAACTTCAATATGCATATATGCATCAGACTTATTACAATTT
AACTGATTCAACGAAACTGAAAAATAAACATACGAAGAAAGTCTCTTCCA
GGAAAATCAGTTACAGTGGGTACGGCGACACGACAAGTTGCAAAAGACAT
AAAAACCATCCAAAACTAAAAGAGCTATTCGCACTTTGGATACGCATGGC
GAATTTATTTAACGTAAGTTACGCATTAACACACGGTACGTTACTAGGGG
CGTTACGTGATGAAAATCTCATTCCTTATGACCACGACATGGATATCATG
ATCGATCATGCGGAGATTCCAAAATTCTCACAAATGATCGATACTTCTTT
TAATGAACATGATTATAAATTCCACTTAACAATCCAAAGAGAATACCAAC
GCTCCAATTACAAACGAAACCGATACTCATGTGAAGGCTATTTAATGTAT
CCCTGGTACCGAGACGTTTGCTCTTACATTGAACCCGTGGGTCGGCTTGT
CTACGGTCCACATTTGTATCTGGATTTAGTTGGATATAAAATTATTGGAA
AATCATTATTCAATTTTCAGACTGAAGATAAAATACATGAATTTGATGTC
AAAGATATGTTACCCTACACTGAATGTAATTTCTTAGGGTTTCGGACGTT
TTGTCCGAGAAATAGTACGGTTTTAATGACCAAAGTTTATGGTTCCAATT
ATATGGATTCGATAAAAAAGTGTCGAAATGGTGACTGGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:442928..448076 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 28-897:871 |
| Aaloc | 1-24:5150 |
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