XLOC_042075.2 (mRNA) -

Overview
NameXLOC_042075.2
Unique NameXLOC_042075.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000431_pilon:182297..183458+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042075.2 ID=XLOC_042075.2|Name=XLOC_042075.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1162bp|location=Sequence derived from alignment at sc0000431_pilon:182297..183458+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaactttttcaaattacttTTGTGACTCTGTTCATCGCTGTATGGGC TCATGCCAAAAAGAACCCCATGGAAAGTAAGCATCTGATTTTCATTGTTA AATACTCATAATAGATTTCTAATCCGCATATTGAaccaaaataaatcttt ttaaatgaaaaattaaaatctgttTAGGACTTtgaaatcttgtcttgatc TAGCTGAATTGGGATCAGTACATCAGGATAGCAAACACCCGCCGTTGTCT ACCAAAGAGACTTTTCCATTcgtagaatttagaaaaattcaggaaaatat tgaaaatctgtGCTAATATGAGTGTACTTTCCGCCTGAGATGCAAAACTG ATTTaaatgctcaaaaatgttctttgCATGAACAAAACCTTCTTCTTCTT GTCTTTCCAGCACCTGGATTGGTGGACGGTGATATCCAAGTCTCGCCGGA AGAGTTCATCGCATTGAAGGAAGGCAAATTGACATTCGGTTCAATTCGTG GTGGTAGATGGACCAAAGGAGAAATCCCTTACgtcatttcatccaacatg agtAAGTCTCCCTTTCTTATTTTTGCACCTCCTTAAAATATGGGTTAGGT TACTATggtaaattttccaaatttactGATTTGTTTTGAGAACTGATTCG ATCAAGTTGTAGAGGTGGAAATTTCGTCTGAAACCACGACAACAGGAAAC GTCACTTGTAACACCATCCTTCTCCTTCATTAAGTTTGAACTATTTTCAA ACCAAGAACATTGTCACATACTTAATACACAGTAATTTGATATTTATCCT TCTCGGGTTTTAATACTTTTCCGGTGTATACAAAATGAGTGAAGGATTTC TAAAAGTAGTTGGGGTGCGTAAGATTACTCAAGTAACCTGCTTTTCCATT ATTAACTTTGCTAAATATGTTTTATAGCCCTAATTAGAGAAAAGTTTACG ATATTTCCCAACGGATTCTTCTTGACTTGTCCACCCCAGTCTCGTCACCA TGCTCAGTTTTCTGTATTACGTTCCAACGTTTTTGAACAGGAGCAAGCGG ACGTCAACGTATTCAAGAAGCTATCAACGAATACCACGCAAGGACCTGCT TGAGATTCAAACAACGCACCAATGAACGATACTATATCACTTTCCAAGAA GGGACAGGGTAA

Coding sequence (CDS) from alignment at sc0000431_pilon:182297..183458+

>XLOC_042075.2 ID=XLOC_042075.2|Name=XLOC_042075.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000431_pilon:182297..183458+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaactttttcaaattacttTTGTGACTCTGTTCATCGCTGTATGGGC
TCATGCCAAAAAGAACCCCATGGAAAatgaaactttttcaaattacttTT
GTGACTCTGTTCATCGCTGTATGGGCTCATGCCAAAAAGAACCCCATGGA
AACACCTGGATTGGTGGACGGTGATATCCAAGTCTCGCCGGAAGAGTTCA
TCGCATTGAAGGAAGGCAAATTGACATTCGGTTCAATTCGTGGTGGTAGA
TGGACCAAAGGAGAAATCCCTTACgtcatttcatccaacatgaCACCTGG
ATTGGTGGACGGTGATATCCAAGTCTCGCCGGAAGAGTTCATCGCATTGA
AGGAAGGCAAATTGACATTCGGTTCAATTCGTGGTGGTAGATGGACCAAA
GGAGAAATCCCTTACgtcatttcatccaacatgaGAGCAAGCGGACGTCA
ACGTATTCAAGAAGCTATCAACGAATACCACGCAAGGACCTGCTTGAGAT
TCAAACAACGCACCAATGAACGATACTATATCACTTTCCAAGAAGGGACA
GGGTAAGAGCAAGCGGACGTCAACGTATTCAAGAAGCTATCAACGAATAC
CACGCAAGGACCTGCTTGAGATTCAAACAACGCACCAATGAACGATACTA
TATCACTTTCCAAGAAGGGACAGGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042075.2XLOC_042075.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000431_pilongenomesc0000431_pilon:182297..183458 +
Properties
Property NameValue
Aaloc220-339:1043
Aaloc79-216:413
Aaloc1-75:1