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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:663535..667631+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042074 ID=XLOC_042074|Name=XLOC_042074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4097bp|location=Sequence derived from alignment at sc0000192_pilon:663535..667631+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTACACATCACGTACTCATAAATCGGACTGTCAAAAGTGTTTATA
CCATGACCATGCGGATTGTTTCGACAGAATCACAAACTCTTATGTTCAAG
CGGGGCTTTTGGATAAAGAATCGTCGTGTCATGGTAACAACACACCACCG
TGTGAGAAATGTAACCCCAGTTTTTATTTCTACGACACGGGTGACGATCC
AGTATTACCACATCATTTATCCAGTTATTCTCTCTACGGTGAGTAAACAG
TCTCTCCGCCTTTCAAAGGGTGTCCGAGTCATGCAAGACAAGAAAGATTA
AATCACTTGATGGtattaaaaatatacaatgaaaacGAAATCTTTAGAGA
TCACTGGGCCTCACACGAAGAATTTCCATCTTTTTTGTCTCTACTACTGC
CCTCTTTAATAGCCCtttttttttGTGGACATTCGAATTGATTATTCGCG
AACCCTAGAGAGATAACAGTTGACTAGTATAATTTTCTTCCCGTACAGAC
ATGCGTATGCCGAGTTACGCCAATACGGAAGTGAACCCTACGTTAGAATT
AGCACGCCGTATTACAGCATTCAATTACCGTAACGGGAAAGTACCACAGC
GCATGAGCAGAATGTTTGCTATATGGAGCAATTTGGATATGAAGAAAGAC
GAACCTCCAAAAGTAAGTTCTCTCATGATATTATCTGcgtttagtttttc
ttttggtTTCTGTAAGCCTCAATCTCGGTTAAagtatattgagaattttg
attgattcctcgtttttagcaatttaaagtttgggcgagaaagtcgcttt
tgggctaattgataaatttattcaaatattacaattcgggaggggtttag
acttccaggctatattctgagccaaATTGgaacaattttcaatttttgga
tcCTCAGCTGCTAAGATCCTAAGACTTAAGTCTAGCGTCAAAAATCTAcc
tttccaacctaatttagagcgcttccataccgtttgtaagatttcgtggg
gaatttccatttttctcaaatattatgactttgattgctGCATTATTGGT
ACTAGAGAGTTTTTTGTCAATAACTACAGTATCGTTTGAAATGTATAAAT
TGTTAGTCAAAGAATCGTTTATGTTATTCTGTTGGTAAGAGAAACAGATC
ACACCTACACACCTCTTATAACGTTATCAAGTATCACAattctaaaccaa
tcaaaatacgaGCATAGAAAACTGTACTCGGTCTGCCCTGGCACCCTAGT
CCGTTGCTGAAGCCATCGCCATCAAACAAATCGAAAAGATTGGGATTAGC
AAACGGGTTATCGCCATGTTTCCGAGTTAACAAATTATACGCTAATTTCT
TTTCCATTCTCATTAGTACTCAATTCattgaacatttttctttttcttct
tgcaGCGAAATCTGTTGAATCAAGGTGACAATTTGGAATATTTCACAAAC
CGATTGAAGAAAGTTCATTCATCGTTTACACCCAACAAGAAACCCATTAA
AACGACCTTAAGTGGTAAGTCCAAATCATCTCATTTAGCCAATCCCTCAT
TCACTTTCTCACTCACGCTATCCCTCTCCACAACTCTATGAGAATTCGCT
TTCTTAAAAGCGTGTAGTTAATGGATTCTgaaattaacaaagatattgGG
TTTTGTGAAAACAATCCTTTCCTCGCTTTTCAACTCATCAAAACTCATCC
TCGTTCCCACTGAACTTCACTCCTTCATATCTcccttgttttttcttttt
cagagaaGAACCTGGTGGACCAGTTAGTGTACCAACATTCTCAAGCCATG
AACCGTCTCCATTCAACGCGAAACGTAACCAATCTATCTTCACAATCCAC
AAAGAATCATAAACTAGCCAGTCAAACGGCAACGAAGAGAAATACAAAAC
ATCTTCCGAAATTAGATACTTTATCACCAACAACTTCAAGTGTAAGACTT
AATTTACTGCAAGGAAGCTTTTTCTTTTGTAGTTTGTAGTACAGTAATTG
CCGGTTCACTCGCAGGCTCGGTCATtacttaaccctttgagtgccagggt
ccttttttctaagttttttttaaaaaatcgctagttcaaactttaagggc
ttatatctcctgatctagaaggaattagaagctcgtatatagctcgttgg
atagcttagagtctcttctttcttttgggcgccttcggcgccgcccgatt
taggaagggcgtggtgggcagcggccaagggggggggtaggttagggaat
taaagcagtcaggcccgctgcgcggacctgactgaactgatgaaaaggtg
cccagtggtaaaatttcaaatcaattcactagaagacagaataaagtaaa
acagggccaaatttggaggttcttggatcactcgttgaccaaaaataggc
aaaaaacggtcagacttttttgcttaaaatttcgctggaaagactcactt
ttgaatttttttttgcttgaccataaaggacaatctaattcctacgagtt
cgaccaaaaataacgatttctaactcaaactgggcattacaggagggctt
cgccctcctatatagcccatgtcgtatatatacgacatcggcacttaaag
ggttaaacaaagtgaaaaaaaaattttgaaaatgtgattttttggtgttt
ttcagcatttttgagtgagtttaggccaaaaattgagaaatctaaaaaaa
aaaataatttttgcaatttttctttaaccttACCGGAAAAGATACAACGT
TgattcaacgttcatctaacgttatgtgGACGTTGTGACCACCAggtaaa
cgttgaaacaacgttgtgtgctagctgggtaTTGCACCAGCATGAAAACT
GATGGAAACACCACATTTTTGGCTGTAATTGTTTTATTGtatttaattgt
tttcaaacTTGTATACTTTTTTACTCTTAGATTTCGCCAAAACGGATGGA
CAGTAGTTTACGTGGTGCGCATGCACAATACATGGCATCGAGAACCGCAA
GTCAAAAGTCTGGAAAACTCATAGGGTTGAAACCCCCTTCATTGGACGAT
TCTTCGTCTTACAAAGAGCGGTATGTAACATtttttaaggtatgtgttca
ccttccttgacacattctctttaattgatcatatctttagaacaacaaat
ttttatacatcaaaagtatatattttctgaaagccaataatattctcttt
ctaatggtaaaagtttcagctgaatttaaaaaactgggcaggatataatt
aaaatcttaagaattttaaccttacctacttcaaagaagttaaagtcacc
catagcttttgaaatttgaaaaaataatttcgatactatgttcccaatag
attgaaccaaaaaaatgtcttaggatttttttttggatcgactttaactc
gagaaaacttaaaaattgttaaaatttggaaaaaaatcattcatttctcg
atttttttccacttaacctgaaattgtgaagctttaactcgattagaaaa
aaaatcctaagacatttttttagttcaattctttgccgaaaatataaaaa
aaaaaGttCatagctaaatgctatgggtgactttaacctcgttaaaagta
gtatggtatggtaaaatttcatttttttctacatcaatttgaaatttttg
acgaGATAATTACTGTTTAATTAAGTAATCagagaaatgtgtcaaaaatg
ttACTATTCAATAGATGTGAGAATatacatcagctgaattctctcttttc
tctttgttgtttccgaaagagacaattatttgagtaaataatccatcata
agacgaactttgttttaaaatttaaatggtcataactctggatcaaaaaa
agattttaagatcgcgattttaccaaaatgaaatccagtaacttttcttc
cactttgactgaaaaaagaatttttgacaaaaaatcggaaaaaaggtgta
cacatacctacAAATTGAAAGATAAACTGATGACTATGGTGGTATGCTTC
ACAACGCAACAATGGCTTAGTAAAAGCAATTCAAATCAATTCCTTATTTT
TTCACTTTTTCAGAATTTCGCAAGAAGTATACAAACCGCCGACCGAG Coding sequence (CDS) from alignment at sc0000192_pilon:663535..667631+ >XLOC_042074 ID=XLOC_042074|Name=XLOC_042074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000192_pilon:663535..667631+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTACACATCACGTACTCATAAATCGGACTGTCAAAAGTGTTTATA
CCATGACCATGCGGATTGTTTCGACAGAATCACAAACTCTTATGTTCAAG
CGGGGCTTTTGGATAAAGAATCGTCGTGTCATGGTAACAACACACCACCG
TGTGAGAAATGTAACCCCAGTTTTTATTTCTACGACACGGGTGACGATCC
AGTATTACCACATCATTTATCCAGTTATTCTCTCTACGATGGCGTACACA
TCACGTACTCATAAATCGGACTGTCAAAAGTGTTTATACCATGACCATGC
GGATTGTTTCGACAGAATCACAAACTCTTATGTTCAAGCGGGGCTTTTGG
ATAAAGAATCGTCGTGTCATGGTAACAACACACCACCGTGTGAGAAATGT
AACCCCAGTTTTTATTTCTACGACACGGGTGACGATCCAGTATTACCACA
TCATTTATCCAGTTATTCTCTCTACGACATGCGTATGCCGAGTTACGCCA
ATACGGAAGTGAACCCTACGTTAGAATTAGCACGCCGTATTACAGCATTC
AATTACCGTAACGGGAAAGTACCACAGCGCATGAGCAGAATGTTTGCTAT
ATGGAGCAATTTGGATATGAAGAAAGACGAACCTCCAAAAACATGCGTAT
GCCGAGTTACGCCAATACGGAAGTGAACCCTACGTTAGAATTAGCACGCC
GTATTACAGCATTCAATTACCGTAACGGGAAAGTACCACAGCGCATGAGC
AGAATGTTTGCTATATGGAGCAATTTGGATATGAAGAAAGACGAACCTCC
AAAACGAAATCTGTTGAATCAAGGTGACAATTTGGAATATTTCACAAACC
GATTGAAGAAAGTTCATTCATCGTTTACACCCAACAAGAAACCCATTAAA
ACGACCTTAAGTGCGAAATCTGTTGAATCAAGGTGACAATTTGGAATATT
TCACAAACCGATTGAAGAAAGTTCATTCATCGTTTACACCCAACAAGAAA
CCCATTAAAACGACCTTAAGTGagaaGAACCTGGTGGACCAGTTAGTGTA
CCAACATTCTCAAGCCATGAACCGTCTCCATTCAACGCGAAACGTAACCA
ATCTATCTTCACAATCCACAAAGAATCATAAACTAGCCAGTCAAACGGCA
ACGAAGAGAAATACAAAACATCTTCCGAAATTAGATACTTTATCACCAAC
AACTTCAAGTagaaGAACCTGGTGGACCAGTTAGTGTACCAACATTCTCA
AGCCATGAACCGTCTCCATTCAACGCGAAACGTAACCAATCTATCTTCAC
AATCCACAAAGAATCATAAACTAGCCAGTCAAACGGCAACGAAGAGAAAT
ACAAAACATCTTCCGAAATTAGATACTTTATCACCAACAACTTCAAGTAT
TTCGCCAAAACGGATGGACAGTAGTTTACGTGGTGCGCATGCACAATACA
TGGCATCGAGAACCGCAAGTCAAAAGTCTGGAAAACTCATAGGGTTGAAA
CCCCCTTCATTGGACGATTCTTCGTCTTACAAAGAGCGATTTCGCCAAAA
CGGATGGACAGTAGTTTACGTGGTGCGCATGCACAATACATGGCATCGAG
AACCGCAAGTCAAAAGTCTGGAAAACTCATAGGGTTGAAACCCCCTTCAT
TGGACGATTCTTCGTCTTACAAAGAGCGAATTTCGCAAGAAGTATACAAA
CCGCCGACCGAGAATTTCGCAAGAAGTATACAAACCGCCGACCGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:663535..667631 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 841-873:4065 |
| Aaloc | 700-837:2931 |
| Aaloc | 514-699:1756 |
| Aaloc | 403-510:1406 |
| Aaloc | 241-402:501 |
| Aaloc | 1-237:1 |
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