XLOC_042052 (mRNA) -

Overview
NameXLOC_042052
Unique NameXLOC_042052
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000202_pilon:366385..367395+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042052 ID=XLOC_042052|Name=XLOC_042052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1011bp|location=Sequence derived from alignment at sc0000202_pilon:366385..367395+ (Clytia hemisphaerica_ch_hm2_pilon)
GGCAATGAGAGTACACCAGACGTATCCCTGGTCGGTGAGCTTTGGAGGAA CAAATGTGAATGGCAAACCGGTACCCAAATGGGTAGCTCTGATCATTTAC CAATCAAAGTCACAATCAACGCAAAGGTGACACACCAATCTGTCTTCGGT AAACCAGGAAGATGGAGACGAAACGGTGTCAACTGGAACAACTTCAGAAA CGAAGTAGAAGACCATTGTCAAAATCTCTTAGAAGAAAATAACCTCACCA GAAGAGTTGCAAGATTCAACCAAATCCTGACACAGGCTGCaaaaaaaCAC GTGGGAAAATCCAAACCTGGAAGGAAGATCAGCTCCTTCATGACCCCCAC CGTTAAAGCTGCCCTAAAAAGACGGAACAACCTGAGAAAGAAAGTCTCCA CGCACCGCAAAGAGTGGCTTGAATCATGCAAACAAGCACAAGAAGAAATC ACCAAAGCTAAGGAACAAAGCTGGAAGGACCTACTTGAATCTTCAGCGAT GGAAATCGACGACACCAGGATGTGGAAGATAATAAAAAGCCTAAACGGGT GCCCTGAGACAAATTCTCCAAATGAGGCGATGAGACACAAAGGAAAACTC ATCACATCAAACAAACGTAAGGCAAATATATTCGCAAAACACTACGCAAA CGTCAGTAGACACAAGTTTACCAAGGAGGAAAGGAACATAAATCGAGAGG CCAAGAGGAGAATTCACTCAACTACGGTAAACAACGAATATTGTCAAGAC TTTACCAAAGACGAGTTGAAAAAGGCGATAAAAGAAATGAAGAGAAAAGG GGCACAAGGCCCTGATGAAATACCACCAACTTTTCTGAAAGAATTGGGAG ACAAAGGTCTTGACGAACTACTGGGAATCTTCAACAACTCAATGGTGTCC GCACACTGCCCACAGATATGGAGAAATGCAATCATAATCCCGCTACTGAA GTCTGGAAAGATTGCGAGCGAATTAGCATCATATCGCCCAATCAGTCTTA CATCGTGTGTA

Coding sequence (CDS) from alignment at sc0000202_pilon:366385..367395+

>XLOC_042052 ID=XLOC_042052|Name=XLOC_042052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2022bp|location=Sequence derived from alignment at sc0000202_pilon:366385..367395+ (Clytia hemisphaerica_ch_hm2_pilon)
GGCAATGAGAGTACACCAGACGTATCCCTGGTCGGTGAGCTTTGGAGGAA
CAAATGTGAATGGCAAACCGGTACCCAAATGGGTAGCTCTGATCATTTAC
CAATCAAAGTCACAATCAACGCAAAGGTGACACACCAATCTGTCTTCGGT
AAACCAGGAAGATGGAGACGAAACGGTGTCAACTGGAACAACTTCAGAAA
CGAAGTAGAAGACCATTGTCAAAATCTCTTAGAAGAAAATAACCTCACCA
GAAGAGTTGCAAGATTCAACCAAATCCTGACACAGGCTGCaaaaaaaCAC
GTGGGAAAATCCAAACCTGGAAGGAAGATCAGCTCCTTCATGACCCCCAC
CGTTAAAGCTGCCCTAAAAAGACGGAACAACCTGAGAAAGAAAGTCTCCA
CGCACCGCAAAGAGTGGCTTGAATCATGCAAACAAGCACAAGAAGAAATC
ACCAAAGCTAAGGAACAAAGCTGGAAGGACCTACTTGAATCTTCAGCGAT
GGAAATCGACGACACCAGGATGTGGAAGATAATAAAAAGCCTAAACGGGT
GCCCTGAGACAAATTCTCCAAATGAGGCGATGAGACACAAAGGAAAACTC
ATCACATCAAACAAACGTAAGGCAAATATATTCGCAAAACACTACGCAAA
CGTCAGTAGACACAAGTTTACCAAGGAGGAAAGGAACATAAATCGAGAGG
CCAAGAGGAGAATTCACTCAACTACGGTAAACAACGAATATTGTCAAGAC
TTTACCAAAGACGAGTTGAAAAAGGCGATAAAAGAAATGAAGAGAAAAGG
GGCACAAGGCCCTGATGAAATACCACCAACTTTTCTGAAAGAATTGGGAG
ACAAAGGTCTTGACGAACTACTGGGAATCTTCAACAACTCAATGGTGTCC
GCACACTGCCCACAGATATGGAGAAATGCAATCATAATCCCGCTACTGAA
GTCTGGAAAGATTGCGAGCGAATTAGCATCATATCGCCCAATCAGTCTTA
CATCGTGTGTAGGCAATGAGAGTACACCAGACGTATCCCTGGTCGGTGAG
CTTTGGAGGAACAAATGTGAATGGCAAACCGGTACCCAAATGGGTAGCTC
TGATCATTTACCAATCAAAGTCACAATCAACGCAAAGGTGACACACCAAT
CTGTCTTCGGTAAACCAGGAAGATGGAGACGAAACGGTGTCAACTGGAAC
AACTTCAGAAACGAAGTAGAAGACCATTGTCAAAATCTCTTAGAAGAAAA
TAACCTCACCAGAAGAGTTGCAAGATTCAACCAAATCCTGACACAGGCTG
CaaaaaaaCACGTGGGAAAATCCAAACCTGGAAGGAAGATCAGCTCCTTC
ATGACCCCCACCGTTAAAGCTGCCCTAAAAAGACGGAACAACCTGAGAAA
GAAAGTCTCCACGCACCGCAAAGAGTGGCTTGAATCATGCAAACAAGCAC
AAGAAGAAATCACCAAAGCTAAGGAACAAAGCTGGAAGGACCTACTTGAA
TCTTCAGCGATGGAAATCGACGACACCAGGATGTGGAAGATAATAAAAAG
CCTAAACGGGTGCCCTGAGACAAATTCTCCAAATGAGGCGATGAGACACA
AAGGAAAACTCATCACATCAAACAAACGTAAGGCAAATATATTCGCAAAA
CACTACGCAAACGTCAGTAGACACAAGTTTACCAAGGAGGAAAGGAACAT
AAATCGAGAGGCCAAGAGGAGAATTCACTCAACTACGGTAAACAACGAAT
ATTGTCAAGACTTTACCAAAGACGAGTTGAAAAAGGCGATAAAAGAAATG
AAGAGAAAAGGGGCACAAGGCCCTGATGAAATACCACCAACTTTTCTGAA
AGAATTGGGAGACAAAGGTCTTGACGAACTACTGGGAATCTTCAACAACT
CAATGGTGTCCGCACACTGCCCACAGATATGGAGAAATGCAATCATAATC
CCGCTACTGAAGTCTGGAAAGATTGCGAGCGAATTAGCATCATATCGCCC
AATCAGTCTTACATCGTGTGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042052XLOC_042052-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000202_pilongenomesc0000202_pilon:366385..367395 +
Properties
Property NameValue
Aaloc1-1011:1