XLOC_042034.3 (mRNA) -

Overview
NameXLOC_042034.3
Unique NameXLOC_042034.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000064_pilon:478289..479889+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042034.3 ID=XLOC_042034.3|Name=XLOC_042034.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1601bp|location=Sequence derived from alignment at sc0000064_pilon:478289..479889+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAGGAACCATACAACCACCAAAAAGTCGAAAGAAATTGACAAATGA ATTTGAACACTTGAAAATTGGAGCAGAGAATTTGCATATGAAAGTgagta tttatttttcaaactttttcttgtACATCAATAAAAGGAACTTTAAACCG GTTTTAAAtcagtacatgttttttataagcatggtGTAAACTTTTGTGAG CCTCATTTACCTAATGCTtagcaaaattaattttttgagtctTGGTTGAA TATGCATATGCTATACTTATTTGATAGTTCAATTTGAACATTATGggtgt ttttttgtaatttgtggGATAtatgctttgaaatttttttaaattgaggC CAAGCATATGCTTAGGCAAAGTCTTAGTTTTTGCAAGAATTGAGCCTGAA TATGCTTATAATAAGTAATTcttgaaatctgaggctcagattgtaaATAA TTTGTTCCTAGGTTTTGGCAAAATTGCCTCGttttattttgggattttag aatcttagagtttaaatattttttattgatgttttgtattttaatttctt tttcatgtgaTAATGATATATACACGCTCTTTTACTAGAACGTCCTAATT TCAGCTGAggctggatgttcttattttcttatcaattttcagtctaaaat gtttttattggtGTTCTTGAATTCGGTTCACTTAAAATCTAATGAaacct ttaaatgttaaaattgGCTTCAAAATCGAGTAAATTTGCTACtttttttA GAGGAGAAAATTAGTTACAGCATGACACAAAATTCCTGAATGACTCCTAA TGAggttttcagcaatttttttcgattctCGGGCTGaacatgttcttaag atgttcttaaatttttgctaaatttcagcctaaatgtccttataaactgg gttctgaTAAATAATAAAACGTGTACTTCGACAATAAGCTCTTTTATAAT ATGATCTTGAGGCtgtaaaattcgaaaaatttttaggatttttgggattt tttgggggattttctttggaaaagtgtttttttttgttttttttctttgt tttattttatctattctaacaatttttAGGAtagaaattacaaaaacctt taaatttctGTCTAATTTTTGCCTTATTTCAGGTTAAtagggaaaatttt tcaaagctttcttcctaaaatagaaatttaatgACAATAGAGATTTGAAA GTAAATTGAGCTTTCTTTATTTTAAGGTGACTGTTTCTGAAGAGAATGGA TCGGCTGAAACAGAAATCCACGtcacaaaacaacaacaaaagttGATTAA ACTTGCCATGGCAAACAATAAGAAGCACCTGTTAAATTACATTCTATCGA ATCTGACACCTGAAGATACTGAACTGAATTCCATTGTTCTTAAGTTCATT GGTAAGAACATCAAAAGTGAAATCAAACAGATCTGTTCAAGCAAAAATGA AACAACTACCTTTCGATGTAACGATGTTTCGAAATTGACCGAATTCTCAT ATGATACTCAATATCAAGAACTTGAAACTAATGCTCCGTTCACATTCAAT TCTATTGTCAGCATCGCTAAAAACCCAAGAGAAAATCGTAATAAGAATAA A

Coding sequence (CDS) from alignment at sc0000064_pilon:478289..479889+

>XLOC_042034.3 ID=XLOC_042034.3|Name=XLOC_042034.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000064_pilon:478289..479889+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAGGAACCATACAACCACCAAAAAGTCGAAAGAAATTGACAAATGA
ATTTGAACACTTGAAAATTGGAGCAGAGAATTTGCATATGAAATCAAAAG
GAACCATACAACCACCAAAAAGTCGAAAGAAATTGACAAATGAATTTGAA
CACTTGAAAATTGGAGCAGAGAATTTGCATATGAAAGTGACTGTTTCTGA
AGAGAATGGATCGGCTGAAACAGAAATCCACGtcacaaaacaacaacaaa
agttGATTAAACTTGCCATGGCAAACAATAAGAAGCACCTGTTAAATTAC
ATTCTATCGAATCTGACACCTGAAGATACTGAACTGAATTCCATTGTTCT
TAAGTTCATTGGTAAGAACATCAAAAGTGAAATCAAACAGATCTGTTCAA
GCAAAAATGAAACAACTACCTTTCGATGTAACGATGTTTCGAAATTGACC
GAATTCTCATATGATACTCAATATCAAGAACTTGAAACTAATGCTCCGTT
CACATTCAATTCTATTGTCAGCATCGCTAAAAACCCAAGAGAAAATCGTA
ATAAGAATAAAGTGACTGTTTCTGAAGAGAATGGATCGGCTGAAACAGAA
ATCCACGtcacaaaacaacaacaaaagttGATTAAACTTGCCATGGCAAA
CAATAAGAAGCACCTGTTAAATTACATTCTATCGAATCTGACACCTGAAG
ATACTGAACTGAATTCCATTGTTCTTAAGTTCATTGGTAAGAACATCAAA
AGTGAAATCAAACAGATCTGTTCAAGCAAAAATGAAACAACTACCTTTCG
ATGTAACGATGTTTCGAAATTGACCGAATTCTCATATGATACTCAATATC
AAGAACTTGAAACTAATGCTCCGTTCACATTCAATTCTATTGTCAGCATC
GCTAAAAACCCAAGAGAAAATCGTAATAAGAATAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042034.3XLOC_042034.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000064_pilongenomesc0000064_pilon:478289..479889 +
Properties
Property NameValue
Aaloc94-468:1227
Aaloc1-93:1