XLOC_042032 (mRNA) -

Overview
NameXLOC_042032
Unique NameXLOC_042032
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000070_pilon:1287761..1288693-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042032 ID=XLOC_042032|Name=XLOC_042032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=933bp|location=Sequence derived from alignment at sc0000070_pilon:1287761..1288693- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATCACAAAATGGGAAATACTTTAACTAATGTACCAAATCCCCGATA CATGAAAGACGAGGAAACCCAAACAGCACGTATCGCACCGCAGATGGTTT GTTCGTCCACACAGACGGATGGTGGTCCCGTAATGAATGAAATAGATGAC CACAGTAAGTAAGACAGCTACATTTTGCTTTAACTTTAAATTTGATCATT GTCACCCTATCTAATGGGATATAAACTTCTCGTATCTCTATTGTGCGTGA TTGTAAGTTGTTCACTTCTTGGGAACTTTCATTACATTCAAAAATCCAGC CAAAGGTAAGGGCTTCCGTAGGCAACATTTGTTTTCATTTGAGATTATTT TTGTTTTCATTTGAGATTATTTTTGTTTTCCTATTTCAGCACGACTAATT CTGGGTATCGTGGCCCAATCAAGGGAGGAGCTGAAACAGTTGATCCGATC TCAGAAAAGGATGGAAAGTGGTACGGAAAATTTCACGAGTTCGTTTTCCT TTCGGATTGATGAAATACACGTTTTTTATAAGCATGGGGTAAATTTTTGT GAGCCTCATTATGCTTAGCAACATTAGTTTTTTCAGCCTCGAATATGCCT ATCTATGCTAAGCGTAAGTGATGGTGCAATTTGTTTGGTGTTGTTTGTAA ATTAGGGGATAAATGCTTTGAAATTTTGTAAATTTGAGGCTCAGCATATA CTTAGGCGATGCCTAAGTTTTTGCAAGATTTGAGCCTGGATATGCTTATA AGCGTTATGCTTATAAAAAACGTGTAGAGAGCTTCATTAGCTTTTAAAGT GTGATCACAAAAACTAAAATTGCTTTCAATCTTTCCTTTAGTGAGCGGTT ACTTTTCACGTTCGCGGTCGTCATCGTCATCTTCTTCACGACATTCGCCT TATACCAAACTCAAAGATCGTAAAGAACATTAA

Coding sequence (CDS) from alignment at sc0000070_pilon:1287761..1288693-

>XLOC_042032 ID=XLOC_042032|Name=XLOC_042032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000070_pilon:1287761..1288693- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATCACAAAATGGGAAATACTTTAACTAATGTACCAAATCCCCGATA
CATGAAAGACGAGGAAACCCAAACAGCACGTATCGCACCGCAGATGGTTT
GTTCGTCCACACAGACGGATGGTGGTCCCGTAATGAATGAAATAGATGAC
CACAAAAGATCACAAAATGGGAAATACTTTAACTAATGTACCAAATCCCC
GATACATGAAAGACGAGGAAACCCAAACAGCACGTATCGCACCGCAGATG
GTTTGTTCGTCCACACAGACGGATGGTGGTCCCGTAATGAATGAAATAGA
TGACCACACACGACTAATTCTGGGTATCGTGGCCCAATCAAGGGAGGAGC
TGAAACAGTTGATCCGATCTCAGAAAAGGATGGAAAGTGCACGACTAATT
CTGGGTATCGTGGCCCAATCAAGGGAGGAGCTGAAACAGTTGATCCGATC
TCAGAAAAGGATGGAAAGTGTGAGCGGTTACTTTTCACGTTCGCGGTCGT
CATCGTCATCTTCTTCACGACATTCGCCTTATACCAAACTCAAAGATCGT
AAAGAACATTAATGAGCGGTTACTTTTCACGTTCGCGGTCGTCATCGTCA
TCTTCTTCACGACATTCGCCTTATACCAAACTCAAAGATCGTAAAGAACA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042032XLOC_042032-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070_pilongenomesc0000070_pilon:1287761..1288693 -
Properties
Property NameValue
Aaloc238-327:91
Aaloc157-234:543
Aaloc1-153:934