|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:382565..387202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042002 ID=XLOC_042002|Name=XLOC_042002|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4638bp|location=Sequence derived from alignment at sc0000019_pilon:382565..387202+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTGGAAAAACAAGGGTAAAACGAAAGCCCAGAACAACTTCGAC
CAGTAGTCATGACAAAACCCTCGTCCCAAATGAAGAACGAAAAGAAAAAC
TAGTATCGCTTGGTTTCGATGAAAATGAGTGTGACGTCATCATTGAAACC
AAAGACAAAGAAGTTCACTTACCGTTGAATTTCTTGGAAATGGTTTCCAA
TGACCAAAATATCCAAATGGCAGATGGGAAACTATACATTGATGTTTTTT
CAGAGAAGCTTATCAAAGCTTTATTATTTTACCGCCAAAAGTATTATACA
GACAACTTTGAACGTAAGTATTGAGGActggaaaacacgagttaaaaaaa
cccGAGCTATGAAAACCGAGCTAtaacgtcataactcgggtttCTCACAA
CTCGGGTTTTAAGGTGTACctaaaaaacccgagttatataactcaaaaat
ttaaagtgCACCTCAAATGACCGAGTTAAAATTAACTTGGAAAATTAAGG
TGCACCTttaaaaaccgagttatgacgtcataactcgggatttTCATAAC
TTGGGTTTTTTAAGCTCGGGTTTTCCAGGCCTCTGtaagtttttaaaact
ttccgATTCTTTGAGGTTAGGTTGTAATTCTATTTGTAAGATCTTtttgt
aagcatatctaggctcagatagggcaaaaatttaagcctgttctttttat
tattattattattattattaccttGGGCCTAAAATGTTccgattttgatt
gtttttgagttttacagatttctaaaattttgcttaagATATAAGCATCA
AGTATTTGTCAAACCTTGTCCACCCCTCGATCTAAGCATCTCCGAGCCAA
GTTTGGCTCTTTgtagtatgcttataaaaatgcaTGTAAATGCTTGCAAA
TGACCTCATAAAacgtttcaattgttttcaaattgTCTGCAACCAAGCAT
TTGTACTGTACTCTTAGGTTTCAAATAAACAgtgggttcgaataaacggg
ggattggaaaattttcgagattttaataaacggggggttgaaaattgtac
ttctgaaaaccaaaaaaaaacaagacgacttgaagtcgaaaatttcgcct
agaatttgaactgcatgggaaaaacaataagtagagattgaagctaatct
gaaatctactttacatcgagccttgatgaaacaaatttacaagaacaacg
aggcttaaaatcgctaaaaaaattaagaccGATTTAAGAAGAATTGttgc
ttaaaattttttaagaactcttatgaagtatatgcttataaaagataaat
atgctcatattgtgcgccattcCCTGTTTAcattgtaagaactaattacc
gaaagatatatcaccgtttatcaagagttattgatttgattcttataaag
tatatgcttataagaaaaataaatatgctcatattgtgcgccatcccttg
tttactttgtaagaagtaattaccgaaaggtatatcaccgtctatcaaga
gttattgatttgattcttataaagtatatgcttataagaaaaataaatat
gctcatattgtgcaccgtcctttgtttactttgtaagaactaattaccga
aaggtatatcaccgtctatcaagagttattgatttgattcttataaagta
tatgcttataaaaaataaatatgctcattttgtgcgtcatcccttgttta
ctttgaagaactaattaccgaaaggtatatcaccgtctatcaagagttat
tggtttgaatcttataaagtatatgcttataagaaaataaagaaaaaatc
aaaactgtgaagctaaagacacaaagatatatgacgcaATCCAAATTGTC
CGTGGTTATaagagcgtgtaatttgtaaattaaatttagtgagttcgtcc
accgtatcaagtactttcgttttctaattttttttccgatgacaccaaca
ccgcgaaaggctatcgtaatactttcgctaggtgAAATTAATATAGGCta
aaactaggtcacagtgtggatgtaaaccacactgaaacgaccgccttcca
tcacgcatcacgctcgcaaaagagcgcgcgcacattattaacgcttaCAT
GTCATCtgcagtacattttagattattcattgaaaacagattacaatata
gtcatttttcttgtctcgattattcaattccgaataaaagacattcaagc
aaaaaaaagagaaacacctgggtaatctagttaaaaaaaccgaaagtaaa
ttgTAGACAAAGTAacgagccaaggcaaaacgagattagcgtaccactat
gaaagaaaccgcctccggcggtcgatcaggttatttagagaaaaataagg
agccttctctttgacagttgaaaatattcttaaaaattaatatatggggg
ggggtcctaataaggtccgggggttggaaaacttTCGAGAAATTAAAGAG
TgggggggggtgtttatttggaacctaagagtaattgaTTCTGGTCAAAT
TGAGGATGCTCATATTTGGAATTTAAATGCTACTAAGCTTGAAAACCCGT
ATTATTCTAGTACTAATATGAATcctatttgaaacattttttattttgtt
ctttttttagttgaaaatatTGCAGAAATTGAAGAGCTAATCAAAGTGTG
TACGACTTTTAAATTGAAagtatttcaaaactatttgaTCGCACGTTTGG
ACAAGAAGTACATCGACAATGCAGAATATTTGAATAACGATAGTCTTCTC
ATTTTGAACATCTACcggaaaaatggtttcaaagaaaatgttcaaaaaat
gatGTGCAAAGGGCTTGGTTTACGCTCGCTTGATCAATTACTGTTACCTA
ATTATCTTGCTCTTGATAAAAACCTACGATTTGAACTACTAAAAGATAAA
GTTATGGAGTGTTATAAGTCAAAATGTTTAGCTGACAACGGTGGTCTTCG
TGATTTACGTtttatcttcaattttcttGACTTGATCTTCTATGAAAACC
GTGTCCCCAATCTTGCGGTAAAGAATGAATTCACGGAACCTATACCATTT
AAAGTGCCGCCTGTTGATTTAGGTTCAATATCATGTAAGAAAGATGCAAA
AAGCTGTGTCACTTTGATCGTTGAGAACAAGGAAATTCATATCAATTCAT
TTGTTTTGACCGATAATTCACCTGTCTTCAAAGCTATGCTGAATTCTACA
TTTAAAGAAGGACAAACCCAGACGATCGAACTCCccggaaaaaagtttga
agactTTGTATACTTTCTTCAGTTCTTGTCACCGTTATGTAGACGTTCGA
TCAAAAGTAAGGATTCTTGACTTTTCATTTTagtattttgcagaccagaa
tgtaaattTGGCTAAAGTTACATATTGATCGATTTACTCGTTCAATTTGA
TTGAAATCTGTTTCTGAGAGGTGCTTTGTCAAATAAACGAGACTAGTAGT
GCAGAATTTGGTCCCATGGCGAGTACCTTGCAGGTCTGTGAAATCGACCC
CCTGCAGGAACGCAGTAACtaattcttgaacttttgacttgaaattttta
ccaGTGGTAGATATTGACCATATATAAGACAGTGTATAAAATTTCAGTTT
AGTCACGTGCGTGgttagtattttacagaccggtccgtTTTTAACTAAAG
TACTCACTTTCTGCATAACCGCTCGtctgattttgttgaatttgtcgCTG
CAAGCTTGTATTATTCAATATCAATACCTaacttttgtcaaaatttcaag
tcaatagtaTTTTTCCTTCCCTAGACACAGTAACCTAGGGACTGACTTAG
ACAAGAAGGGCAATTTTgggccggtctgtaaaatacacgataccAGCCGG
TGGCGAAAAATTGAAACTGTGCCCCAGAAATAGATGTCACGTAGAGTTTC
ctcacaaaatttgagcaaaagaatgtaaagtaaaaaaaatcaggggtcct
aattttttaaaagattataaCGTTATCAGGTggcaatgacgtcataaatg
atggcgaaattttcaccaaagatgccaaTTCATAATTGGTGctaatttgc
aaaatttcaagcaattcatttgcattatcataatttttataTACATTTCG
CATTTCAGATGAAACAGACGTTGTAATTTTGGCACCGCTCTGCCAAGAGT
ACCAAATCGATTGGCTGGCAGATAAAATCAAAACGTTTATTTGTAGTCCA
ATCTCTAATACAAAGACCATACTCAAATATCTCTCCATAACTGAGACAAT
GAACTTTGGACATGGTATCGAAGAAAGTGTAATTAACCTGATAAAAGAGC
CTTTCCAGAATGTTCACATGGAATCAGAATTTCTACGACTCAACCAACGT
TTGCAAATATTAATTGCTCGTAAGCTgctttggaaaatatatttggtaAA
TATCGATCGTAGAAAAGGTCCTTTAAGCAGTATCATCGACCATACCATAT
TATCGATCTTTGATaatcaacaacaaaaatatttgcttGAAACACGTGAT
AAAGCTCATTGTGATTACGTCATCCGCAAACAAGCAAGGCCGAAGGAGAA
AGTTGCCACCAGCAAAAGGATAAAATTTGATTCTCCTCgagaattgtttt
cttttagcAGTGACgatgataatgataataatctttaa Coding sequence (CDS) from alignment at sc0000019_pilon:382565..387202+ >XLOC_042002 ID=XLOC_042002|Name=XLOC_042002|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3078bp|location=Sequence derived from alignment at sc0000019_pilon:382565..387202+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTGGAAAAACAAGGGTAAAACGAAAGCCCAGAACAACTTCGAC
CAGTAGTCATGACAAAACCCTCGTCCCAAATGAAGAACGAAAAGAAAAAC
TAGTATCGCTTGGTTTCGATGAAAATGAGTGTGACGTCATCATTGAAACC
AAAGACAAAGAAGTTCACTTACCGTTGAATTTCTTGGAAATGGTTTCCAA
TGACCAAAATATCCAAATGGCAGATGGGAAACTATACATTGATGTTTTTT
CAGAGAAGCTTATCAAAGCTTTATTATTTTACCGCCAAAAGTATTATACA
GACAACTTTGAACATGGAGTTTGGAAAAACAAGGGTAAAACGAAAGCCCA
GAACAACTTCGACCAGTAGTCATGACAAAACCCTCGTCCCAAATGAAGAA
CGAAAAGAAAAACTAGTATCGCTTGGTTTCGATGAAAATGAGTGTGACGT
CATCATTGAAACCAAAGACAAAGAAGTTCACTTACCGTTGAATTTCTTGG
AAATGGTTTCCAATGACCAAAATATCCAAATGGCAGATGGGAAACTATAC
ATTGATGTTTTTTCAGAGAAGCTTATCAAAGCTTTATTATTTTACCGCCA
AAAGTATTATACAGACAACTTTGAACttgaaaatatTGCAGAAATTGAAG
AGCTAATCAAAGTGTGTACGACTTTTAAATTGAAagtatttcaaaactat
ttgaTCGCACGTTTGGACAAGAAGTACATCGACAATGCAGAATATTTGAA
TAACGATAGTCTTCTCATTTTGAACATCTACcggaaaaatggtttcaaag
aaaatgttcaaaaaatgatGTGCAAAGGGCTTGGTTTACGCTCGCTTGAT
CAATTACTGTTACCTAATTATCTTGCTCTTGATAAAAACCTACGATTTGA
ACTACTAAAAGATAAAGTTATGGAGTGTTATAAGTCAAAATGTTTAGCTG
ACAACGGTGGTCTTCGTGATTTACGTtttatcttcaattttcttGACTTG
ATCTTCTATGAAAACCGTGTCCCCAATCTTGCGGTAAAGAATGAATTCAC
GGAACCTATACCATTTAAAGTGCCGCCTGTTGATTTAGGTTCAATATCAT
GTAAGAAAGATGCAAAAAGCTGTGTCACTTTGATCGTTGAGAACAAGGAA
ATTCATATCAATTCATTTGTTTTGACCGATAATTCACCTGTCTTCAAAGC
TATGCTGAATTCTACATTTAAAGAAGGACAAACCCAGACGATCGAACTCC
ccggaaaaaagtttgaagactTTGTATACTTTCTTCAGTTCTTGTCACCG
TTATGTAGACGTTCGATCAAAAttgaaaatatTGCAGAAATTGAAGAGCT
AATCAAAGTGTGTACGACTTTTAAATTGAAagtatttcaaaactatttga
TCGCACGTTTGGACAAGAAGTACATCGACAATGCAGAATATTTGAATAAC
GATAGTCTTCTCATTTTGAACATCTACcggaaaaatggtttcaaagaaaa
tgttcaaaaaatgatGTGCAAAGGGCTTGGTTTACGCTCGCTTGATCAAT
TACTGTTACCTAATTATCTTGCTCTTGATAAAAACCTACGATTTGAACTA
CTAAAAGATAAAGTTATGGAGTGTTATAAGTCAAAATGTTTAGCTGACAA
CGGTGGTCTTCGTGATTTACGTtttatcttcaattttcttGACTTGATCT
TCTATGAAAACCGTGTCCCCAATCTTGCGGTAAAGAATGAATTCACGGAA
CCTATACCATTTAAAGTGCCGCCTGTTGATTTAGGTTCAATATCATGTAA
GAAAGATGCAAAAAGCTGTGTCACTTTGATCGTTGAGAACAAGGAAATTC
ATATCAATTCATTTGTTTTGACCGATAATTCACCTGTCTTCAAAGCTATG
CTGAATTCTACATTTAAAGAAGGACAAACCCAGACGATCGAACTCCccgg
aaaaaagtttgaagactTTGTATACTTTCTTCAGTTCTTGTCACCGTTAT
GTAGACGTTCGATCAAAAATGAAACAGACGTTGTAATTTTGGCACCGCTC
TGCCAAGAGTACCAAATCGATTGGCTGGCAGATAAAATCAAAACGTTTAT
TTGTAGTCCAATCTCTAATACAAAGACCATACTCAAATATCTCTCCATAA
CTGAGACAATGAACTTTGGACATGGTATCGAAGAAAGTGTAATTAACCTG
ATAAAAGAGCCTTTCCAGAATGTTCACATGGAATCAGAATTTCTACGACT
CAACCAACGTTTGCAAATATTAATTGCTCGTAAGCTgctttggaaaatat
atttggtaAATATCGATCGTAGAAAAGGTCCTTTAAGCAGTATCATCGAC
CATACCATATTATCGATCTTTGATaatcaacaacaaaaatatttgcttGA
AACACGTGATAAAGCTCATTGTGATTACGTCATCCGCAAACAAGCAAGGC
CGAAGGAGAAAGTTGCCACCAGCAAAAGGATAAAATTTGATTCTCCTCga
gaattgttttcttttagcAGTGACgatgataatgataataatctttaaAT
GAAACAGACGTTGTAATTTTGGCACCGCTCTGCCAAGAGTACCAAATCGA
TTGGCTGGCAGATAAAATCAAAACGTTTATTTGTAGTCCAATCTCTAATA
CAAAGACCATACTCAAATATCTCTCCATAACTGAGACAATGAACTTTGGA
CATGGTATCGAAGAAAGTGTAATTAACCTGATAAAAGAGCCTTTCCAGAA
TGTTCACATGGAATCAGAATTTCTACGACTCAACCAACGTTTGCAAATAT
TAATTGCTCGTAAGCTgctttggaaaatatatttggtaAATATCGATCGT
AGAAAAGGTCCTTTAAGCAGTATCATCGACCATACCATATTATCGATCTT
TGATaatcaacaacaaaaatatttgcttGAAACACGTGATAAAGCTCATT
GTGATTACGTCATCCGCAAACAAGCAAGGCCGAAGGAGAAAGTTGCCACC
AGCAAAAGGATAAAATTTGATTCTCCTCgagaattgttttcttttagcAG
TGACgatgataatgataataatctttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:382565..387202 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1468-1542:4564 |
| Aaloc | 1327-1467:4420 |
| Aaloc | 1015-1323:4111 |
| Aaloc | 319-1011:2613 |
| Aaloc | 109-315:106 |
| Aaloc | 1-105:1 |
|
