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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:642779..644802+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041993 ID=XLOC_041993|Name=XLOC_041993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2024bp|location=Sequence derived from alignment at sc0000019_pilon:642779..644802+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGGTTGGTATCAATGGATTCGGACGTATTGGACGATTGGTGTG
CCGTGCAGCTTTTGAGCATGAAGAAATTGAAGTAGTCGCCATCAATGATC
CTTTCATTGATTTGGACTACATGGTCTACATGTTCACCTACGACTCAACC
CATGGACGCTTCAAAGGAACTGTCTCATCTACTGATGGAAAACTTATCAT
CAATGGAAAACCAATCACAGTAAGATAGCTCCAATAGTATTTTGTATACG
CTTTCAGCTGTTTTGATTCGGAAAGTGAAATACTTTATTTGACGACTCCC
TTTACACATGATATCTAGCTCTTTAGCTACACTCAATCATGAGAAATAAT
GTTTGAATTCCTTCTAAATAAAAAGACTGCTTTTATTGGCTCTATAATAA
ATCAtcttttaaaaagtttcttGCAACTCGGTCAACTAATATCGAGgttt
attttcataatattcTAGGTTTCTATGTGCCGTAACCCAGCTGAAATTCA
ATGGGCTGCTGCTGGAGCTGAAATGGTTGTTGAATCATCTGGCGTTTTTA
CAACCAACGAGAAAGCCTCTGCTCACATGACTGGTGGTGCAAAGAAAGTC
ATCATCTCAGCTCCTTCAGCTGACGCACCGATGTTCGTCATGGGTGTCAA
CGAAGATAAATATGACGCTGCTAAAATGCATGTTGTCAGGTAATGCCttt
ttgaaacttaaacggtgattttgttgaaatttttagtttttgatttctaa
attcaattttAGAATAAGTTGGCTAAATCACTTTTCGGTTCAAGCAGCTG
ATTCAATTTAGACAACAAATTCTATTGAGCCAAAAGAATTACAGAGAAAA
GCTTTATTTTTAAGATCcggtaattttttaaagttcaaGAGTTAGGAGTG
ACAAACAGTGAAGGCAAGCAAGCAAATAACTAATAAGATGTATAACAAGg
gtgaatttttcaatttaatgtttttctGTCGACAGCAATGCTTCATGCAC
CACCAACTGTTTGGCACCCCTTGCCAAGATCATTAACGACAACTTTGGAA
TCGAAGAAGGCTTGATGACTACTGTCCATGCTACCACTGCTACACAAAAA
ACTGTCGATGGACCATCCATGAAAGTAAGACTTTATTTTGAATAGGTATT
TTGCTCTTTTAAAAGAGTACCACTGCTGAAATGTTCCAAAGGATATCGAA
CCCTTGAAATACCTAAAGCAACGTCTTAAAGAATTTAAAGGCTCAAATAC
TAGAATTAGACTCTGAATCAGACTGGGAATGTCTGTTTTCAATTTCTGCT
TAAAATTCTTCTTAGAAATGGAGAGACGGTCGTGGTGCCAGCCAAAACAT
CATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGCAAAGTCATCCCTG
AATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGTCCCCACACCTGAC
GTCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAGGTGCCAGTTACGA
TGAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGACCCAACTCTTGGAC
GCTACATGGGATACACCGAAGACCAAGTTGTCTCAATGGACTTCTTGGGT
GACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTATTGCTTTGAGCCC
ACAATTCGTCAAACTCGTCTCATGGTACGTATTTACTCTTTGATTAGAAG
TAGAAGATTATTATTTTATCTCGCAACACATTTGCTTCTGAATTAGCAAG
TCTTAGTGTTCGAGTAAATCATATGTAAGcatccaaagttttttgaaCAA
CAAAATAAGTGACTATACCTATTCTTTTTAGGATATGTTAGGATTTCCAT
TACGACATCTACTCCCTTATACACTTATGTAACTGATTTGGTGGATATTA
TAACCTCTGTCTTGAaaatgtgaatttttttatcatctttAATTTTCTTC
TCAGGTATGACAACGAGTACGGATACAGTCATCGTGTCTGTGATTTGATC
AAATATATGGCCACTAAACAATGA Coding sequence (CDS) from alignment at sc0000019_pilon:642779..644802+ >XLOC_041993 ID=XLOC_041993|Name=XLOC_041993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2016bp|location=Sequence derived from alignment at sc0000019_pilon:642779..644802+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGGTTGGTATCAATGGATTCGGACGTATTGGACGATTGGTGTG
CCGTGCAGCTTTTGAGCATGAAGAAATTGAAGTAGTCGCCATCAATGATC
CTTTCATTGATTTGGACTACATGGTCTACATGTTCACCTACGACTCAACC
CATGGACGCTTCAAAGGAACTGTCTCATCTACTGATGGAAAACTTATCAT
CAATGGAAAACCAATCACAATGGTCAAGGTTGGTATCAATGGATTCGGAC
GTATTGGACGATTGGTGTGCCGTGCAGCTTTTGAGCATGAAGAAATTGAA
GTAGTCGCCATCAATGATCCTTTCATTGATTTGGACTACATGGTCTACAT
GTTCACCTACGACTCAACCCATGGACGCTTCAAAGGAACTGTCTCATCTA
CTGATGGAAAACTTATCATCAATGGAAAACCAATCACAGTTTCTATGTGC
CGTAACCCAGCTGAAATTCAATGGGCTGCTGCTGGAGCTGAAATGGTTGT
TGAATCATCTGGCGTTTTTACAACCAACGAGAAAGCCTCTGCTCACATGA
CTGGTGGTGCAAAGAAAGTCATCATCTCAGCTCCTTCAGCTGACGCACCG
ATGTTCGTCATGGGTGTCAACGAAGATAAATATGACGCTGCTAAAATGCA
TGTTGTCAGGTTTCTATGTGCCGTAACCCAGCTGAAATTCAATGGGCTGC
TGCTGGAGCTGAAATGGTTGTTGAATCATCTGGCGTTTTTACAACCAACG
AGAAAGCCTCTGCTCACATGACTGGTGGTGCAAAGAAAGTCATCATCTCA
GCTCCTTCAGCTGACGCACCGATGTTCGTCATGGGTGTCAACGAAGATAA
ATATGACGCTGCTAAAATGCATGTTGTCAGCAATGCTTCATGCACCACCA
ACTGTTTGGCACCCCTTGCCAAGATCATTAACGACAACTTTGGAATCGAA
GAAGGCTTGATGACTACTGTCCATGCTACCACTGCTACACAAAAAACTGT
CGATGGACCATCCATGAAACAATGCTTCATGCACCACCAACTGTTTGGCA
CCCCTTGCCAAGATCATTAACGACAACTTTGGAATCGAAGAAGGCTTGAT
GACTACTGTCCATGCTACCACTGCTACACAAAAAACTGTCGATGGACCAT
CCATGAAAAAATGGAGAGACGGTCGTGGTGCCAGCCAAAACATCATTCCA
GCCACTACTGGAGCTGCCAAAGCTGTCGGCAAAGTCATCCCTGAATTGAA
CGGCAAACTCACCGGTATGGCTTTCCGTGTCCCCACACCTGACGTCTCCG
TTGTGGACTTGACTGTCCGTCTCAAAAAAGGTGCCAGTTACGATGAAATC
AAAGCCGTCATCAAGAAAGCTTCTGAAGACCCAACTCTTGGACGCTACAT
GGGATACACCGAAGACCAAGTTGTCTCAATGGACTTCTTGGGTGACACCC
GATCCTCAATCTTTGACGCTCAAGCTGGTATTGCTTTGAGCCCACAATTC
GTCAAACTCGTCTCATGAAATGGAGAGACGGTCGTGGTGCCAGCCAAAAC
ATCATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGCAAAGTCATCCC
TGAATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGTCCCCACACCTG
ACGTCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAGGTGCCAGTTAC
GATGAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGACCCAACTCTTGG
ACGCTACATGGGATACACCGAAGACCAAGTTGTCTCAATGGACTTCTTGG
GTGACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTATTGCTTTGAGC
CCACAATTCGTCAAACTCGTCTCATGGTATGACAACGAGTACGGATACAG
TCATCGTGTCTGTGATTTGATCAAATATATGGCCACTAAACAATGAGTAT
GACAACGAGTACGGATACAGTCATCGTGTCTGTGATTTGATCAAATATAT
GGCCACTAAACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:642779..644802 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 940-1008:1956 |
| Aaloc | 580-936:1316 |
| Aaloc | 442-579:987 |
| Aaloc | 220-438:469 |
| Aaloc | 1-219:1 |
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