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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000331_pilon:95498..100870+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041988 ID=XLOC_041988|Name=XLOC_041988|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5373bp|location=Sequence derived from alignment at sc0000331_pilon:95498..100870+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAAAACGAACAAGTTATGACCCAGAAAAGTGGGATGACTTTGT
TGAGGatatgaagaagaaaaggaaaggGAACAAAATTGACACAGCTGCCA
GCAACAGCAACTATCCAATCTTGAGGGACAAAGAAATCATTGTCCAACAC
TTAGCCAGCCATGCCACAGGTATTAGACCAGCTTCTGTCTTCTGATGAAT
TTTTCATCCTTTAGATCTGGAcaatattttttgttaatttgcTCATCTTG
TTTTTACTCTCAACTGACAACTTATCTGAGAATGTCTACGTGTGTGTGTC
TGTCCCGTCCCCTTGctcaaaactttagggcagcctggagacttcaaaaa
tggccCAATTTAGCTAAAGTTTTACACACTTGATCTTTGGGTGTATCCCT
GGGAGTGtttttctttctccattttttcaaaattttgattttttaagggT
GTGGTCACCAGTTTTTGCCCCAAGACGAGGCTAAAGATTGGCACGCTGGA
GACTTCAGAAATggtccgttttggctgaaatcttGCATGATTCTTGGGGG
CGAATCTCTGGCCGagtgttttttccattttttcaaaattttgattttaa
agggTGTGGTCATCACTCCTTTATTTCAGGCCCTATGAGACTAATGCTAA
ACTTTAAAGCACAGCCTCCTAGCTTTTCActcaggggggggtcggtacta
aaatctcaggcATCATGACGTTTAGTGATATGGTGATAcccaaaaacctt
gaaaatccttttagtaccatGGGATgctaaaataccttaaaggaagaaat
tttggcaggaatttaatttggcggatggccgaaaaagttttttcagaccg
aatttaatttggcagatggctggaaaaaataaatttggtgGTGGCAGGAT
ATTTCTGGCCTAAAATCGTTTAAATAggctaaaaatttgtttttaggcTC
GAAAAAGCAcaaattctcaacttcagttgagctagaatctgagaatatGT
Gaatgtgtgtatgtcccaaaactttggggcagcctggagtacttcaaaaa
ttgttcgatttggctgaaatttggcacacttgttccttgggtgaatatct
gcggtgctttttggggcctggggcgagttttttgtcaaaacaaGGCTAAG
AGCTTTGGAGCAGACTAAAGGACTCCAAAATGGtcgatttggttgaaatt
tggcacacttgttcatcgggtgaatatctgggggtctacagttgggccta
tgaataatttgaagccactgaagttgagccaagtgcgttgcgcacgttcg
actatttggAAGATTAattgaataaattaaatttggccggcatttaattt
tgcggatagtggaaaaaataaatttcggcGGGaaattaatttggcggatt
tcaggtAAATCcactaaatccgccaaattttcttcccgcagAAATTTCTT
CCATTTAAAAGGTACCAAAAAGGTGGTATCTagacaaaaatttgacaaat
tttttagTACATTTGTActaaatatgctgaaaattggtgatttttatccg
gcaagtacaaaacgcctactacctactacttaatacttactacctactac
ttactacctacaTGACTTTTTCCCGcactttttctataaagtttacagac
gcACTTCTTcgtagaagagaaaaatatttccttcgcacacttatttattc
atgttagttttatttataagaatcgatcaatctaaaaagttaaaatactt
taaGTAAGTAGAGCCCTATGTTTCACTGGGTACTTGCTGAAAATCCTTTG
ACATGTCTTTgacatttattgacaaaatgacccttTTGAACCAAACTATT
GACAGGGTCGTTAAATATGACCTTTGTAGACTTCATTTTATAtagcaaaa
attcttattgtgcTCAATACGAAGAAGCTTTCAGTATCGCAAggtagaaa
ttttcagtaggaaaatactacaaagagctgttttagagatgtCAATTTGA
CCATGTCAAAGTATtgacgaaatgaaatttttgataaaaatattgacaca
gtTATTGAATATTATAAGCTTCCAAGAAATGTTTTGGCACCATTTGATAT
GATGCAGATCATACAATAGGATAGAGATAGATTAACCCCCTATTATATTA
CAGAGCCTTTTTTAGACATTTAGGTGTATTCTTATCGTCTTATAATAAGA
TTCATAAGAGGAAGTATGTTTAGGAAAaaggaaagttcttataataagag
tcataagagagagtaggtttaggaaaaaagaaaaaatcaagataatggcc
ttttgttttatacttcagtatactttacttatatgaggcgaagagaatat
ttactcaatacgtaaatatgctaaatattcttttagataacacttttttc
aagtaaatataaagcaaagacttgtgtgttagcattcagatattataaaa
ccaatttttttagaatagagatttcgaacaagcgaaggagagttctggtc
tgtaaagtatacaAACAGagtaggtaggtagtaagtagtaggtagtaagt
attaagtagtaggtagtaggcgttttgtacttgccggattttaatcagtt
tttgaatttttttcaaaatttttttctttgaagaaaatttcctgagttga
attatttttccatttagTCCAATGTCTAAAATATTTGCTTAATTCATACA
GTGTACTACTGGTTCAAAGTAtctttttgtgcaaaaatcagtatttttga
gaaaaatagtcCCGAGAAGACAAAATTTGCTCCAAGAAAAccaaattatg
tcaaaatatcccaaaagatttttaGTTCCTATGTGTATAAAATACCACAT
ATCTAAATTGGGATGGTGGTATgcaaaaaatcctcaaaaaccttttaata
ccgacccccccctgtttCACTGAAATGTTGATATTTCGTCTCGTCTTGCA
TTTTATTGTTTGAGCATGTATAGTTAAagcttacttacttacttacaggT
GATGCTATGAAGTTCAAGAAACTTGGTCCACTTGAATTTGTTGGATACCC
ATACAAGGAATTTACAATTGACAACATTAAACATGCATGTGTCAACCATT
TCAGAAATAGGTTGTCTGTTGAAAGATCTGACTTGGAGTGTGATGTTTTA
CAGACTCAATTTGGGCCCCCATGCACAAAGATAACACACATTAAAAGtta
caaaacaatttttgttcGGTTTATATATAAACCAAAGATGTCATTAACAG
TGATGGAGGCgttgaaaatgggaaaaaagtcAAGCGAGCCATCGAAGACG
TGTCAATCAAGTCACTTTGCATCAAGTTCACTCGCAATAGGATCAGTTTT
ACTGCCGTCGAAAACTTTGCCATCTGTAATCACTCCGAGATCTTTTAAAA
ATGATGTCCGTATCAAGGAAAAAAGTTCTAGCGTTCCAAAGTCGCTTTCC
CTATCCCAAATGTTGAATGTGGGAAAAACTGTACAAACATTGGATAACTC
TGATGCCCAAATAATAAAGTTGTATACGTTTAACCTTGAAAAACACTGTT
GGGACATATTTTGCGAAACGCGAATAAGGGTAGAACCAGTTGCTTTTGAC
CGTGGAGCCTTTCGAAATGCATACAAAGCTCAGGTAACTCAAAACAGCCT
CAACAAGATTGCACCAGTCCAACAACAGTATGTTGTAAAACGGCTCCATG
AGGAGACTGAGacagaaatgaagaaaatcaacGTAATATTCAACAGTGAA
GAAACTTTCGACTCTCTAGCaaaaaaaGCTGTGCAAATGCATACACTGGC
AAAGAACTTTGCCTCTCAGTTCGCCAAATTCATTCTTGATGGGGCAATTA
AAGATTTTGGTTTGAGTTTTCAGTACAATAATGCCTTTCTTGGAGTGCTG
GGTGATGAGATAGTGATGGTAGAAGAATTTATTGATGGGGATTTTGTGAA
GTATGTCAACAACGATGGCGCTGTCAAACTTGGCTCAAAACCAGATGCTG
GCAATATTGACCGTACACTCAAAGCTGAATGTTTCTGTCACTACACCCAT
GTTAAGTCAGATaaaaaaaTGATCGTCCTTGACATACAGGGTGTTGGCTA
CAAATTATGTGACCCAGAGAAGCCACCAATGACCATTATGACGAAAATGG
AAACTTGAGGTTTTGTATGGGTAACTTGGCTAAACAGGCTATTGAAATGT
TTGTATCTTGCCACGATTGTAACTGATTTTGTACAATGTTAGGTTTAAAG
CCATTTGAGAAATCTGAAAAACCTTAAATACTGTCATTAATATATACATG
ATGTAGACTTTATTTTATCACGTGTGACTGTTATTTGCAGTTACTtgaca
ttctttttttatatttgttccaaattttaaacattttctttttattggat
ttttcaCTGCTGTTATCGTAGACTTGATATTCCTTTATAATTTGGAGGca
acctagaaaaaattattaaagaaggtttctatataccgttagcaagataa
ttttatcagctttccaaaaatgaaattggtcaattttttcctcttggGCA
AAAAGTTATGACCCAAAGAATGAGAGGGGTCCTTTTAGAAAcgtcaattt
taaagttttaaattgatttattttgacTGTTCTATCTGATAAAGCTCGAA
GAATATGTctaaaatggggtcatttgtaaaattttgtcaACCACATCCcg
agaaaatgaccaaaattgcttaaaaattgCTTAAAtatgctgagtcagca
aaatttaaaagtcaaatatctcgagatctaaaCAATGCAATCTCTCATTG
AGGAGCTTCTGTTCAAAATCGTTTTAACCCCTCATTCATCTCTAaaaatt
gctgacgtcagcaagaAAAACTGccattttttcgcaattttgctcatttt
ctcgGGATGTGGTTGACGAAACTTTAAAATTGACGTTTCTAAAAAGACCC
CTCTCATTCTTTGGGTCATAATCTTTTTTGACAAAGagggaaaaattgac
caatttcatttttggaaagctgataaaattatctttccaacggtatatag
aaaccttctttaataattttttctaggttgaccctATTTTAGTCGAAATT
CTACTGGACTATTTTATTTGTTACAAGTTTTAAAcattacgttttttttt
tttgaatattttaatttaaaattttctctaaggagggtgaaatttcaaaa
tcccaACCAGTCCTCTGAAATGTAATAATTTGTTAGCATTTCGATGAAAA
GCCCTGGAATTTGACATATCGGGTTCCATTATACTGTACTAATTTTCACG
GTTAAGACCAAACATTAaataattttgaacaaaaagatCTGGTTTTTCTT
GTGGGTCTGGTACGACAGCGTAA Coding sequence (CDS) from alignment at sc0000331_pilon:95498..100870+ >XLOC_041988 ID=XLOC_041988|Name=XLOC_041988|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000331_pilon:95498..100870+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAAAACGAACAAGTTATGACCCAGAAAAGTGGGATGACTTTGT
TGAGGatatgaagaagaaaaggaaaggGAACAAAATTGACACAGCTGCCA
GCAACAGCAACTATCCAATCTTGAGGGACAAAGAAATCATTGTCCAACAC
TTAGCCAGCCATGCCACAGATGGCTAAAAAACGAACAAGTTATGACCCAG
AAAAGTGGGATGACTTTGTTGAGGatatgaagaagaaaaggaaaggGAAC
AAAATTGACACAGCTGCCAGCAACAGCAACTATCCAATCTTGAGGGACAA
AGAAATCATTGTCCAACACTTAGCCAGCCATGCCACAGgTGATGCTATGA
AGTTCAAGAAACTTGGTCCACTTGAATTTGTTGGATACCCATACAAGGAA
TTTACAATTGACAACATTAAACATGCATGTGTCAACCATTTCAGAAATAG
GTTGTCTGTTGAAAGATCTGACTTGGAGTGTGATGTTTTACAGACTCAAT
TTGGGCCCCCATGCACAAAGATAACACACATTAAAAGttacaaaacaatt
tttgttcGGTTTATATATAAACCAAAGATGTCATTAACAGTGATGGAGGC
gttgaaaatgggaaaaaagtcAAGCGAGCCATCGAAGACGTGTCAATCAA
GTCACTTTGCATCAAGTTCACTCGCAATAGGATCAGTTTTACTGCCGTCG
AAAACTTTGCCATCTGTAATCACTCCGAGATCTTTTAAAAATGATGTCCG
TATCAAGGAAAAAAGTTCTAGCGTTCCAAAGTCGCTTTCCCTATCCCAAA
TGTTGAATGTGGGAAAAACTGTACAAACATTGGATAACTCTGATGCCCAA
ATAATAAAGTTGTATACGTTTAACCTTGAAAAACACTGTTGGGACATATT
TTGCGAAACGCGAATAAGGGTAGAACCAGTTGCTTTTGACCGTGGAGCCT
TTCGAAATGCATACAAAGCTCAGGTAACTCAAAACAGCCTCAACAAGATT
GCACCAGTCCAACAACAGTATGTTGTAAAACGGCTCCATGAGGAGACTGA
GacagaaatgaagaaaatcaacGTAATATTCAACAGTGAAGAAACTTTCG
ACTCTCTAGCaaaaaaaGCTGTGCAAATGCATACACTGGCAAAGAACTTT
GCCTCTCAGTTCGCCAAATTCATTCTTGATGGGGCAATTAAAGATTTTGG
TTTGAGTTTTCAGTACAATAATGCCTTTCTTGGAGTGCTGGGTGATGAGA
TAGTGATGGTAGAAGAATTTATTGgTGATGCTATGAAGTTCAAGAAACTT
GGTCCACTTGAATTTGTTGGATACCCATACAAGGAATTTACAATTGACAA
CATTAAACATGCATGTGTCAACCATTTCAGAAATAGGTTGTCTGTTGAAA
GATCTGACTTGGAGTGTGATGTTTTACAGACTCAATTTGGGCCCCCATGC
ACAAAGATAACACACATTAAAAGttacaaaacaatttttgttcGGTTTAT
ATATAAACCAAAGATGTCATTAACAGTGATGGAGGCgttgaaaatgggaa
aaaagtcAAGCGAGCCATCGAAGACGTGTCAATCAAGTCACTTTGCATCA
AGTTCACTCGCAATAGGATCAGTTTTACTGCCGTCGAAAACTTTGCCATC
TGTAATCACTCCGAGATCTTTTAAAAATGATGTCCGTATCAAGGAAAAAA
GTTCTAGCGTTCCAAAGTCGCTTTCCCTATCCCAAATGTTGAATGTGGGA
AAAACTGTACAAACATTGGATAACTCTGATGCCCAAATAATAAAGTTGTA
TACGTTTAACCTTGAAAAACACTGTTGGGACATATTTTGCGAAACGCGAA
TAAGGGTAGAACCAGTTGCTTTTGACCGTGGAGCCTTTCGAAATGCATAC
AAAGCTCAGGTAACTCAAAACAGCCTCAACAAGATTGCACCAGTCCAACA
ACAGTATGTTGTAAAACGGCTCCATGAGGAGACTGAGacagaaatgaaga
aaatcaacGTAATATTCAACAGTGAAGAAACTTTCGACTCTCTAGCaaaa
aaaGCTGTGCAAATGCATACACTGGCAAAGAACTTTGCCTCTCAGTTCGC
CAAATTCATTCTTGATGGGGCAATTAAAGATTTTGGTTTGAGTTTTCAGT
ACAATAATGCCTTTCTTGGAGTGCTGGGTGATGAGATAGTGATGGTAGAA
GAATTTATTGgatCTGGTTTTTCTTGTGGGTCTGGTACGACAGCGTAAga
tCTGGTTTTTCTTGTGGGTCTGGTACGACAGCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000331_pilon | genome | sc0000331_pilon:95498..100870 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-1143:5338 |
| Aaloc | 172-1104:3001 |
| Aaloc | 1-168:1 |
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