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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:415842..419912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041983 ID=XLOC_041983|Name=XLOC_041983|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4071bp|location=Sequence derived from alignment at sc0000019_pilon:415842..419912- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGAAGTGAGGAAGAATTCAAGCAAGTGGTAAACATTGAAGGTAG
TGCAAACATGACCATGCACGATGCTGATTATCTTCCATCCATTGAAGTCA
CAGACCCTATTGTCCCTGTCAGCTCACAACCAAAAGTTCATAAGCTTGAA
GAGGGAAATGTACCACCCTATAGAGCAATTTTTCTTATTGCAAATGCTGC
TTTGGGAGCAGGGCTTTTGAATTTTCCAGAAGCATACAAAAAAGCTGGTG
GTTTACAAACGGCCATTACTATCCAACTGGTATGACAATGTTTATTTTTC
CATAATATATTTTACGGTCACAAAAACTTATCAAAACTTATCAAGTCGAT
TTTGGGAAGCAAATTTAAATTCCTAATTTGAAATGTATTTATAAGTATTT
TCAACTTTCTTGATAACTCATTCACACTTTTTAAAGTCGAAAATTGATTT
ATAAAAACACTGGCAATAAATTTTTATCTATAATTTTTTATATTTATTCA
ATCAGGTTTTATTATGTTTCATCATTGGTGCTTTCCTGATTATTGCCAGA
GCTTGTAACCGTTATCAAGCGCCGACTTATCAAGAACTTATCCTGGGAAT
ATTGGGTCCCAAGTTCTTTTGGCCACTTCAAATTATCATTGCTATCTACT
TTTTTGGAACAGCCATTACCTACATGATTATTATTGGCGATCAACTTTCG
CCTTGTAAGTTTGATCTCTAAATCTAGTAAGAAATGCTTAAAAACAAAGT
CCAAAAATGTTTTCATTCATTACCAGGGATTATGTTATAAAGGTGGGAGC
TGAAAATCACAGATTTTTCATTACTCTTTAGTTTTTTACATATATTATTT
TAATGTATTTGCAATAATGATGTCTTTAGGTAAGGTATCACAACCTGGCT
GGGTCTTAGAATAATTGCTTAAAATTTCTGATTTTAGTTTTCCAGTTTGT
GACAGGAGAGAGTGGCAAATGGTACACAAACAAGAAAGTCTTATACACCA
TATTTTCATTGTTGTTTTTGCTTCCATTATGCCTGCCAAGAAGATTGAAA
CTCCTTAGCTATACAAGGTTTGTGGTTTTTGTTTTCGTTGCATTTTGTAT
GGTATATTCCTGTTTCTTCTTTTTCAACTTGGGTAGAAAAACATTTAAAG
TTGTTCATTTTTGAAATTGTTATTTTTCCTAAAGCTTTAGAATAAATGAA
TAATTTGAGCATGATCATTTTGAACTGACTACAATTATCTTTATTGTGAG
GCTAATAATTCTTTTTAACACCTTATTACACGAATATTACTAGGCAAGTA
TTCAACGGCCTTGAAATTAACACGCAAAAAATTAACATGGATTTTATTAG
CTTTTTCAAGGACACCACGGCTGGTTTTAATTAAGGGGGTTTTTATTAAC
ACGAAATTTTTCAATTCGTGTTAATAAAATAGCTAGTAATATTCATGTAA
TAAGGTAGTTTCACAAAAAGATATTTATTATCTTTATAAATTTCACACAT
AATAAAATCTTGATATTTTTTCATGTTCAGTTTCTTTGGAGGCATCGGTG
CATTCTTCATAACATTTATCATTATCTATAAACATTTTTATGGAGGTTAT
TCAAACCATGGCCCCGATGAATAGTTAGTGATTTATCTTTATGACTTTAT
TTATAACTCCTATTCTGCTTACATTTTATTCGTACATCGGTCGGTCGTTA
CTTGACCTCGGGCAATATTTCTCAGTACAGCCCTCACTAACCGGTCATTA
TTGCTTACTTTAAACAAATTATGTAAATTGTTCTGTTTTTTTCGATCAAA
TCATGTCACTTGCGACCAAACATAGCTGTTGTAAAATGACTTTACCAAAA
AAAAAAAAAAAGTTTGGGTCCTTAAATTTCGACGATTCTGGTTTTAGCCC
ATGAGTTAGAGCGGGAAAATCGGGCTCACTTAACTTCGTACATTGCTTGA
CTTTTATTTACTAGTAACTGTTTTTATTTTCAGTACTGAAGTAAAATCCG
ACTGGAAATCCTGTTTGGGTGTCGTACCCGTCATTTGCTTTGGATTTCAG
GTTTGTTTCAACTGATAGTGATAGTTAGCTCTACTGTAATTATTAATTTT
GATTATGATAAATTCTAACAATTTATTTGCTAATTTATAATGATGCTCCG
TTTCATTCATTACAAGAGGCATTCAGCCTTCTTGCTTCTTGTAACTCTAA
AATTTTCTTGATAGTAGAAATGACTAAAACTTTTTTCAAGAACAGAGTAA
GTCTTAAAACTTTTTTAGAACAAATAAAAAAATTATTTCATTTAATGAAT
GAATGAATAAATGAATGAATGAATGAATGAATGAATGAAGGGAATCTTAC
GTATCGCTCTGTGCATTAGGATTGAAATTACTAAATACTTTCTAAAAAAA
GTCTGAAATATTGTTTTAAGCAAAGAAACGACTTACTAACTTTTCTCTTT
CAGTGTCACGTGTCTTCTGTGGCAGTTTATGCTGAATTAAAGAACCGAAG
TACCAAACGTTTTTTCATATGTGCTTGTTTTGCAATGTTAGTGTGTGTCC
TCACTTACTCGCTGTGTGGAGCGTTTGGTTTCATGACGTTTGGTCGTAAG
ACCAAAGCTGATATTCTTCAAAATTATGACGACGATGACACACTGGTGAA
TGTAGCTCGATTGGCTGTTGTCTTCATCTTGCTTTCTTCATTTGCTATCA
TCACTTTCTGCGCCAGGTGACTTTCTTTATTTTTGCAATTCCATCATTTT
TGAGGCTAGTCTTTTTTATCAAGGTTCATTCATTCAAGACTTTAAGTCGA
GAATAAATCATTATTATAGTTTGTCTATGTAACGAAAATAAACAATTAAA
AGTCCTCATTTTCTTACTTTGATGGTATCCTATCTCAGGATGAGTTGATT
GACTTTTCTTTCACCAAATCCCAGAGATCCCCTGAAAAAAACTTTCGAAA
AGTTCCTAACCTTAGAAAGATTTTCTTGACTTTTTTCGAACCCTTGATTA
GACCTAAAAAGGGGGAAATCTAGATCCTCAGTTTTTGTCTTTTTGTTGTA
TTCGTAACCCTTAGAGAGACTTGGAAAGGTCAAAGAACCACTCATACCAA
AGTATTCTCCACCAGGCTACTAACACTTTTATTACTTTCCATGATTTTTA
TCCGTTTACAGGACTGTTATTGATGATATAGTTGTCAAGATTCGTAAATA
TAACGAGCATGACCAAATAAGGACAGAGCGACGACGACGAGTGATCGAGA
CATTGTTATGGTTTGCATTCTCATTGCTGTTAGCTTTGGTTGTTCCTGAT
ATTGGAGCTGCCATCTCCATGATTGGTGGTTTAGCTGCTTTCTTCATCTT
TGTTTTTCCAGGTATGTGTTCTATTGTTGTTAAGTCATGTAACTTCCGCC
ATTATGAAAGCAAACATTCGATTTGCGTAAGTGATCCCATCGTACAGATT
ATGGCAGAAATTACGTAACTAAACCAAGGATGAAGAAAACCTCTATTAGT
ACTACACTTACCTATAACAATTCAAAAGTTCGCTCTTAAAAATCAAATGG
GTCTGATTGATTGAAACTTAAAAAGATGATGTAATTGACCTAAATGAACC
AATCAGTGCTGATAAAAAGCGTTTATTGTTAAGGGAAATTTTGGATTGTT
ATAGGTAAGTACGTCCAGGTCAAGTATGGGTAGATAACTCGTCGGGAAAG
CGGAAGATGTAACTGGCTAGGTACGTGATTGACCAAACTCACTAGGTCAT
CGCATATATATCAAAATATGACGGGATTGAGTTAAAATTTGCAAGGTTCG
AATGGGGTTTACGAAACCAAAAAGGCTAAGTATGAAAATATAATTTTTAA
ATAAAAAGTTTGGACTTTGGACTTTCTAAAAGTCTCTCTTTCTTATTTTG
GCAGGTTTCTGTTTATTGAAGACTATCAATCTGGACAAAATTAGATTAAC
CAAAAAAGATTGGGCACTAGTTGTGGTAGCGATCATGTATATTGCTGTTG
GTATCTTCATTTTTGGTGAAACTACAACACTGGCCATTCAAACTGATTTA
AAACCGAGAACAATTTTATAG Coding sequence (CDS) from alignment at sc0000019_pilon:415842..419912- >XLOC_041983 ID=XLOC_041983|Name=XLOC_041983|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2796bp|location=Sequence derived from alignment at sc0000019_pilon:415842..419912- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGAAGTGAGGAAGAATTCAAGCAAGTGGTAAACATTGAAGGTAG
TGCAAACATGACCATGCACGATGCTGATTATCTTCCATCCATTGAAGTCA
CAGACCCTATTGTCCCTGTCAGCTCACAACCAAAAGTTCATAAGCTTGAA
GAGGGAAATGTACCACCCTATAGAGCAATTTTTCTTATTGCAAATGCTGC
TTTGGGAGCAGGGCTTTTGAATTTTCCAGAAGCATACAAAAAAGCTGGTG
GTTTACAAACGGCCATTACTATCCAACTGATGAGAAGAAGTGAGGAAGAA
TTCAAGCAAGTGGTAAACATTGAAGGTAGTGCAAACATGACCATGCACGA
TGCTGATTATCTTCCATCCATTGAAGTCACAGACCCTATTGTCCCTGTCA
GCTCACAACCAAAAGTTCATAAGCTTGAAGAGGGAAATGTACCACCCTAT
AGAGCAATTTTTCTTATTGCAAATGCTGCTTTGGGAGCAGGGCTTTTGAA
TTTTCCAGAAGCATACAAAAAAGCTGGTGGTTTACAAACGGCCATTACTA
TCCAACTGGTTTTATTATGTTTCATCATTGGTGCTTTCCTGATTATTGCC
AGAGCTTGTAACCGTTATCAAGCGCCGACTTATCAAGAACTTATCCTGGG
AATATTGGGTCCCAAGTTCTTTTGGCCACTTCAAATTATCATTGCTATCT
ACTTTTTTGGAACAGCCATTACCTACATGATTATTATTGGCGATCAACTT
TCGCCTTGTTTTATTATGTTTCATCATTGGTGCTTTCCTGATTATTGCCA
GAGCTTGTAACCGTTATCAAGCGCCGACTTATCAAGAACTTATCCTGGGA
ATATTGGGTCCCAAGTTCTTTTGGCCACTTCAAATTATCATTGCTATCTA
CTTTTTTGGAACAGCCATTACCTACATGATTATTATTGGCGATCAACTTT
CGCCTTTTTTCCAGTTTGTGACAGGAGAGAGTGGCAAATGGTACACAAAC
AAGAAAGTCTTATACACCATATTTTCATTGTTGTTTTTGCTTCCATTATG
CCTGCCAAGAAGATTGAAACTCCTTAGCTATACAAGTTTTCCAGTTTGTG
ACAGGAGAGAGTGGCAAATGGTACACAAACAAGAAAGTCTTATACACCAT
ATTTTCATTGTTGTTTTTGCTTCCATTATGCCTGCCAAGAAGATTGAAAC
TCCTTAGCTATACAAGTTTCTTTGGAGGCATCGGTGCATTCTTCATAACA
TTTATCATTATCTATAAACATTTTTATGGAGGTTATTCAAACCATGGCCC
CGATGAATATTTCTTTGGAGGCATCGGTGCATTCTTCATAACATTTATCA
TTATCTATAAACATTTTTATGGAGGTTATTCAAACCATGGCCCCGATGAA
TATACTGAAGTAAAATCCGACTGGAAATCCTGTTTGGGTGTCGTACCCGT
CATTTGCTTTGGATTTCAGTACTGAAGTAAAATCCGACTGGAAATCCTGT
TTGGGTGTCGTACCCGTCATTTGCTTTGGATTTCAGTGTCACGTGTCTTC
TGTGGCAGTTTATGCTGAATTAAAGAACCGAAGTACCAAACGTTTTTTCA
TATGTGCTTGTTTTGCAATGTTAGTGTGTGTCCTCACTTACTCGCTGTGT
GGAGCGTTTGGTTTCATGACGTTTGGTCGTAAGACCAAAGCTGATATTCT
TCAAAATTATGACGACGATGACACACTGGTGAATGTAGCTCGATTGGCTG
TTGTCTTCATCTTGCTTTCTTCATTTGCTATCATCACTTTCTGCGCCAGT
GTCACGTGTCTTCTGTGGCAGTTTATGCTGAATTAAAGAACCGAAGTACC
AAACGTTTTTTCATATGTGCTTGTTTTGCAATGTTAGTGTGTGTCCTCAC
TTACTCGCTGTGTGGAGCGTTTGGTTTCATGACGTTTGGTCGTAAGACCA
AAGCTGATATTCTTCAAAATTATGACGACGATGACACACTGGTGAATGTA
GCTCGATTGGCTGTTGTCTTCATCTTGCTTTCTTCATTTGCTATCATCAC
TTTCTGCGCCAGGACTGTTATTGATGATATAGTTGTCAAGATTCGTAAAT
ATAACGAGCATGACCAAATAAGGACAGAGCGACGACGACGAGTGATCGAG
ACATTGTTATGGTTTGCATTCTCATTGCTGTTAGCTTTGGTTGTTCCTGA
TATTGGAGCTGCCATCTCCATGATTGGTGGTTTAGCTGCTTTCTTCATCT
TTGTTTTTCCAGGACTGTTATTGATGATATAGTTGTCAAGATTCGTAAAT
ATAACGAGCATGACCAAATAAGGACAGAGCGACGACGACGAGTGATCGAG
ACATTGTTATGGTTTGCATTCTCATTGCTGTTAGCTTTGGTTGTTCCTGA
TATTGGAGCTGCCATCTCCATGATTGGTGGTTTAGCTGCTTTCTTCATCT
TTGTTTTTCCAGGTTTCTGTTTATTGAAGACTATCAATCTGGACAAAATT
AGATTAACCAAAAAAGATTGGGCACTAGTTGTGGTAGCGATCATGTATAT
TGCTGTTGGTATCTTCATTTTTGGTGAAACTACAACACTGGCCATTCAAA
CTGATTTAAAACCGAGAACAATTTTATAGGTTTCTGTTTATTGAAGACTA
TCAATCTGGACAAAATTAGATTAACCAAAAAAGATTGGGCACTAGTTGTG
GTAGCGATCATGTATATTGCTGTTGGTATCTTCATTTTTGGTGAAACTAC
AACACTGGCCATTCAAACTGATTTAAAACCGAGAACAATTTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:415842..419912 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1234-1398:166 |
| Aaloc | 1033-1230:910 |
| Aaloc | 769-1029:1619 |
| Aaloc | 703-768:2088 |
| Aaloc | 610-699:2541 |
| Aaloc | 481-606:3133 |
| Aaloc | 280-477:3567 |
| Aaloc | 1-279:4072 |
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