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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:525003..530901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041980 ID=XLOC_041980|Name=XLOC_041980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5899bp|location=Sequence derived from alignment at sc0000019_pilon:525003..530901- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCAAATATTCCTAAAGCTGTAAGTATTCTTGCTTTAAGTACTTAA
ATACCGTGAGATTGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCA
TAGCCCTCAAATAAAAGACCTGGCTGGTTATTAAAATACAACTACGCAGC
TCCACTCTCAGCTCTTCTCTACCATTTTGTTTTGAATTAACTTTGTATTT
TAATGACCAGCCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCAATC
TCACGATATTCACCAGTATTCATCCTCTAGTATAGTTTCCAGATAGACGT
TTTGTGGTCGAACGCGACCAAATGGAACAGTCTTTTGAATAAACTAATAA
ACCAGCTGCACTAAGTCAGCCCAAATGGCTGAGACGATGAAGTACAAATA
AAAGACCAAGCTTTGAAGGGCGCCCCATTTGCTTGGAACGTTTAAGCAAA
AAATGATGATTGGCGCACAATGGAATCCGTCCAAATCAGATGTCGATAGA
ACAATTTTCTGGTCTTAGAAAAATTAGAAAGAAATCATTTCATCATTCTT
TGGCCTTTCTGATAGCTTTTACATGCGAGGGTACTAGTGTTGCGAGCTGA
GGAGTGGTCCACCAGCCTTTTGACCATTGCAGTTAGGAACATTTGGCGAG
CTCCTGTACGCGGCCGCAATCAAAAAAATCAAAACGTCACTCATTAAAAA
ATGACATTCGTGTCTTTTCGCACTTTCTTTAGCCTAGACTAGACGATGTA
GCAAACATAGTAAGTATAAGCATACTGTGCTTTCCATTGGCTGAAGTTTT
CTTTTGCGTTGGAAAAACTTTTCCAAACTTTCAGCGATGATTGACCAAAC
TGTTACAATGAAAATTATCCAGCGCATTTTTTATCTTCTTACCTTCTTCA
TTTTCAATGAAGCACTTGAAGTTTACTGAAGGTAAGCACATAATATATTC
TTATAATTAATTATATATATTCATTTAAACACGCTTTGTTGTGCACTGCG
GTGGAGTGCACGACGTAACTCGCGCGGCAACTAACTCGCCTTCTGTTGGA
AGATCATATTGGGCGTTTTGGCGTCACCACCCTCAATGCAGTGGGCACCT
TTGTCTTTCCACAACTCTTTCCACCATTTTAGATGGCCTTAACAATAGAT
CCAAAAGGGCGCCATAATCTTGGAAGAATAATTTGTTTTGCTCTCCGGCT
TTGGGAAGTAGCAATGTTTTTGGTTGTTTTTCGATGGAAAATGCTAAGAA
ATTTAAGTTTACAAGTGTCATTTAGTTTTTGCTGGCTTATAGAATGGCAT
GATCCTGGATGGTTTCCCTAACTGCCTTGGAACTTAGCAGAACAAAAAAG
GAGGAAAAAAGTGGAAATTTTTCCGACCCTTTATGTGACTTAAATATAAG
TTTCTAATTTTCTCTACCCCTACAGGGACTGACAGGCTCCAAAAAAGCAT
CCTTAAGGGTGATACATACCAGTATCTTTGCCTAGGTACTAAGTTTCGGT
GGCAAGCAATGATAAAATGCAGAATATATGGATAGTTTAGAAGCCAATAC
TCCTCTGTTTATTAAATTCAATGTGGTTTTAAGGCTAAAAATTAGTATAT
CGATCACTTTTTTAGTTTTCAAAATCTTGAAAAAGATGTCTGGCCGAAAT
TTAGTACATGACACATCGAAAAGTGCGGCAACATCAAAGACCCGTAAATT
AAAAGGAAATCAATAGAAATCGCTTCAATAGCAGCAAGCTCGCGCTTGAT
CCAGCTTTAGCTTTTAAAGTATCCTTGGAAAAGCCCATATACAGAAGAAA
CGGTCTACATGAAATGACAGTGATACAGAATTGTTCGAAGAAAAGAAAAG
TTTCTTTAAAACTCACTTTCTTTATAAGCTCTATTATATTTACAATTTCT
TTAATAATTAATTATATTGATAACTTTAAGAAAAAATACATTTTCTTTTA
TTCTTTTTACTATAATTATATGCCTCTTTTTATGTTATGTGTTTTTTCTT
TTCTTTAGCTTTTACTAAGAAAAATTATTTTCCCGCGCTAAGCAATCCCG
ATAAATTGTTTCCCGAAAATAATCCAAAATCGGAATTAAAAACAAATCCA
AAGCACTTCTTGGCAGCAGCGGCTTGCAAAAAATTTTCAAACCGATTTAA
AAAACGGCGTGATGGCGTGAAAATGAAGTGCCGGCGTGATCGTGAAATCT
AGTTTTTTTAGGCGTGATGGCGTGAAATTTGTAGTTCTGCGTGATCGTGA
AAATTATATTTATTAGTTGAATCGTATTTCTATGTCCATTTTAGCCAATT
TAGAGGGTTTAGATTTCAAAATTTTCTTGGTCGGCCCCAACTATGGTAGG
CCTCCTATAGGGTCTCCTATAGATCTCATTTTAAAACATAAAAGAAACGG
TGCAAACAGTTCTATTCATCTGCCATTTATCCTTGTAACTTCCGATTGTT
TTTAGCAGTTGCTAGCTAGTCTTCAAAATGATAAAGTCGAATGCTATGAG
AGGATCGAAACTTGAAAATTTTCCCCGTCAGCGCAAACCATGGTGCGCTT
CCTCCCTAACTAACATTCTCCTCTCTTTCTTAGATGTTTATTCTTATAGA
TGCATCAAAGATATTAGGTCTTTTATTTCAGGAAAACATACATTTGTAGC
AAATCCTTAAACACAAAGAAGCAACAGGTTTATTATGAGGTGTAATTTTA
AGCAGATTGATCAAAGGAATTATGTGGTGTTTAAACCATATTTTGGAAAA
AGAAAGTAAATGAGGGCGATTTTAGCCATACTAAATTGAAAATTTCTCCC
GTCGGCGCAAACCATGGTTGTGCCTCCTCGTTCCCCTTTTGAAAACTATT
CACGCTAATTCACAATTAATGCTCATGGAACCCGTCAACGGGGGGACCAG
GGGGCATGGCCCATCATGTTGCTTGTACTTTTAAAAGATTTCCATTATTT
TTACATGAATTATTTTTCAAATTGAATTGAAATGGGTCCTAAAATAGCAC
TTTGAACCCTTCAAAATTCAAAAAATTTCTCCGTTACCCAACCATGGTGG
GCTTTGTCAATTTACTCAAATATACCTCAGCCCTCAAACTGGTGCCCTTT
GATGTGACCAGGTGTCCAACAATTTTTGATATGCATAAGTCAAGATTACG
TCATTTTTCCTATCGAAAAGACCCAAAAAAACACCCCTGTGTCAAAAATA
GAAAAACAGAGGTAAAAATCTAGATTTTTCGCGTGTTTTCGATAGGAAAA
ATGATATAATCTTGACTTACGCATATGAGAATGCCAAAAAACTGATTGAA
GACCAAACACACATATATGTGGGCAAAAATTAAGTTTATATAACAAAATA
TGAGCGTGAAAACTAAATTTTCTAGGCGTAATGGCGTGAAATCGAAAAAA
ATTGGCGTGATCGTGAAAATCAAATTTTTCAGGCGTGATGGCGTGAAATC
GAAAAAAAATTGGCGTGATGGCGTGAATTTTGGGTCCGCTGGGGGGGGGC
CTCATAACAAGATGGCACTTGGTGTAGCTAAAATCTCATCGCTGTCTGAG
GGCTGAATACTTCCTGTTCAACTAACTACTCCATTTAAAGCAGCTTTCAG
GCATTTACACCATAATCAATAGAAGAAAAAAAGGACATGACCACATAACA
TTGAGATCAAAACCAAAACAGTGGTGTTTTCACCACATTTTGGACTTTCT
GTTCCGCCATTTCCATATAAAGCATGTTGTTCTTTCCATCCAGCAAGCAT
GGTCCCGTCGTCCCACCATGCGCGGGTCATGCATGCAAACTTTAAAATAA
GCGAGGCAAGACGTGCCAACCTCGTTTCCAGACTGTTTTCGAAAAGACAG
TATGTTTTAAAAAAGATAGTATCGTTTTAAAATAGATAGTATTGTTTAAA
AAAGATAGTATCATTACAAAAGATAGTATGTTTTAAACGAGAATAGTATT
TTTTCAAACGGAAATAGTATTTTTTCAACGAAAATAGTATGTTTTAATCG
AAAATAGTATTTTTTTAAAAAGATAGTATGTTTTAAACGAAGATAGTATT
GTTTTAAAGAGATAGTATGTATTTCCGCTTTGGCGCGCCATAGAGTATTT
AGTTATTCAAAAGACCGCCGCGTTTGCCAAAACATCTATTAGGCACAATT
TTGAATTGAAAAGTTTTGTGTGAGAATATTCTATCTGTAATAAAAAAATC
AAATTATAGATATCAAGTTCAAGTTTCAAGTTTCAAGTTTATTTTCGTTT
TATGAGCTATGTACATTTCAAAAATTCCTAACAGAAAAAAACCCTAAGGG
TTTACAAGGTCGACAGGAAATAAAAACTATAATAATATATACCTTAAGGG
AAGAAATTTTGGTGGCTGGAAAGAAATTTAAATTTTTAGATTCAAAATGG
TATTGTGTCCTACTAAGGTTGGCTAATTGTATCCAATATACCTTCCCGGT
CCCCTAAAGGTCTATTCTCAATCTTAACCAAGAAGGTTTTTGGGATGGAT
GATTTACTGATGAACCTCAATGTGATCATTTTGGGGCTTTTAGCTGTTGT
GTTGTGTGCTATAATGGAGGTAGAATCAAACCTTCAATGTTGAATAGTTT
TTTTGGATAACGCGGCGACCTATTTATTGAATAACAAATTACTCCCTCAA
CCAATGAAAAATGTAGTAAATTATCTTCTCTCTAGGTAACTGTCGTGGAG
TAATAAGTTATTCAATAGGCCGTCATGCTCTCCAAAACAACTATTTTTTG
CATTGGCGGCGCTTCACTGATTTTCTATTCTGGGAGGATTATTCCTCACT
TTTAAGTTCAGTACTTTCATTGTTTTATTATTTGAAGAAATATTCTTTTA
ATGTTTAAGTGGAGAAGACCCAAAAGAATGGAGCATTGTTGAACTTCAAG
GAACTTTGGAGAGCAGTGAAGAAGAATTATGTGGAAGTCATATCGGAAAT
TTACACTTTGATGATAAAGTAAGCTCTCTTTTTAGCATAAAGAGACCCAT
CAATCTACAGTGTGCCTGGAATAAAAAGTGGAACAGAAATTCTAAAATAA
AGATGGATAAATCCATTATTTCTAACTATTAAATGTCATGAAAATGAAAT
AATTATTTCCTTTACTTTTTTTAACCCTATTTGATTTTTGTAACCCGGAG
GGGGGGGGGGGTAGAATTTATCACCCTCAATTATTTTTTATCTGAAAATA
CATATGTTGGTACATATGTTCTCATCAAAGCGATGACTTCATGACTAAAT
TTCCACCTGTCGGAAAAAAGCAAAAAGTTATGGTTTAAAAAAATGTCTGT
CACAGTTTAACCAATATAAAGATATTCAAATTATGTTTGAAGATTCTAGA
GGATAAAAGGTTCCCCTGTAACATAATTGCCGGTTTTGGATTTTCCATAA
AGACTTTTCTTTAAATCAATGCTGAAGATGAGTAAAATTTTCAAAATTTG
TCACAAATGATGATATTTTGTAAAGTAGCTCAATGGTTGGGCAAATGCCC
GCGAATGGCATGGTTGTGAATTCGAGTCTCACCGGATCTGTTGGTTTTCT
AACGGTTCTAGTGGCTGGAAGAAGACAGCACGAGAGCGACTGTATTTACT
TCATATTGTAATACATAAGGGCATTCATTTTGTAAAATTACTTTAATTTG
CTTTTCCAGGGTACGCCTCAGCTAATTTGTGGTCACCACCTGGTGACAGG
CAAGATTCAAAAACTCGATAAACCATATGCAGTAATGAAGAAAAACAGTA
TTTCACATGGAATGAGCGAGTCGATGGAAATCGATGATTCAGATGGTCAA
TCAACAGCCTACGATATTGTTGCTTTCGTCAAACAAAAAATAATCTTCAA
AAATCGACCCAAACCAATAATTATCAAAACTCAACCAACAAAAACGTGA Coding sequence (CDS) from alignment at sc0000019_pilon:525003..530901- >XLOC_041980 ID=XLOC_041980|Name=XLOC_041980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000019_pilon:525003..530901- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCAAATATTCCTAAAGCTATGGTTCAAATATTCCTAAAGCTTGGA
GAAGACCCAAAAGAATGGAGCATTGTTGAACTTCAAGGAACTTTGGAGAG
CAGTGAAGAAGAATTATGTGGAAGTCATATCGGAAATTTACACTTTGATG
ATAAATGGAGAAGACCCAAAAGAATGGAGCATTGTTGAACTTCAAGGAAC
TTTGGAGAGCAGTGAAGAAGAATTATGTGGAAGTCATATCGGAAATTTAC
ACTTTGATGATAAAGGTACGCCTCAGCTAATTTGTGGTCACCACCTGGTG
ACAGGCAAGATTCAAAAACTCGATAAACCATATGCAGTAATGAAGAAAAA
CAGTATTTCACATGGAATGAGCGAGTCGATGGAAATCGATGATTCAGATG
GTCAATCAACAGCCTACGATATTGTTGCTTTCGTCAAACAAAAAATAATC
TTCAAAAATCGACCCAAACCAATAATTATCAAAACTCAACCAACAAAAAC
GTGAGGTACGCCTCAGCTAATTTGTGGTCACCACCTGGTGACAGGCAAGA
TTCAAAAACTCGATAAACCATATGCAGTAATGAAGAAAAACAGTATTTCA
CATGGAATGAGCGAGTCGATGGAAATCGATGATTCAGATGGTCAATCAAC
AGCCTACGATATTGTTGCTTTCGTCAAACAAAAAATAATCTTCAAAAATC
GACCCAAACCAATAATTATCAAAACTCAACCAACAAAAACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:525003..530901 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 133-372:241 |
| Aaloc | 25-132:1040 |
| Aaloc | 1-21:5900 |
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