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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:545280..546743+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041979 ID=XLOC_041979|Name=XLOC_041979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1464bp|location=Sequence derived from alignment at sc0000019_pilon:545280..546743+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACATTGAAATTATTAAATGTGATATTTCTAAGCCTCTCATTGTG
CTCATTATGTCTGTCTTGTGGTCTTCAAAAAGCACTCAACGATATGACAA
ACCAAGTGAAAAACTTGACTATGAAGTGCAACCCTGATGGCTTGAAATGC
TCATCGTTCATTTGCAATGTTTTTCATAAAGATGAACCTGACAAGAAGTT
TTTCTCCATGGCTGGGTTTTGGCATTGTAAAGACAGTAAGGAGGTTTTTG
AGATTCATTATGAGGGAGCTAGTGCCACAGcgaacaaaaagtttaatgtG
AATACCAAACAACAGTTAAGTACAATTGTTGATGATAATCAAATCAAGCT
ATCAGTTGATGTCCTGTTTACAAATGAAGGCAacggaatgaaaaatttat
caatgaatTTCAACCTTGATTTAATTAATAACTCAAAGGTTTCAATTGCA
GAAAAGTTTTCATTGAAGCCAGAAATGTTAGCGATGGTGTGTAATTGTGA
AGGTATTAATGctcttgaaaatgaaatgacAACACGCTTCTCACTTATTA
AATCTGAGAAGACATTTTGTTGGGGTTTAACTGAAGATTGCTTATTACCG
TATTGTGTTGGAACAATTGAAAAACCTTATCTTATGCATTTCTCATTCAA
CGGTTCCATGTCCTGTCCAAATAAGCTACCAGAATACAATTTAACTTTGT
CCATCCATCATACAGAATCAATATCAATAAGCCAAACAAAGTTCCTTGTA
AACAAGTTTGATCCTGATATAGAGCTCAAGCATGAAATAGCTGAAAATGT
TCTCCTAAATCTCAATACAAAAAGCTACTTCACCAAAATCACAAAGGAAA
ACATTATTCTTCTGAATACTATTTCCGCAAAGATTTCTGGTAAATACAAA
GCAGATGCTACTCAAAACATCACTGTGAGTTTCCCAAATCACGGCTGTAC
ACCATCTGAAACAATAACAACCGCCAAACCTTCAACCACAAAAGCAACTA
CCAAAGCACCTGCTACAACAGCAGCAACTACCAAAGCACCTGCTACAACA
GCAGCAACTACTAAAGCACCTGATACAACAGCAGCAACTACCGAAGCACC
TGATACAACAGCAGCAACTACTAAAGCACCTGATACAACAGCAGCAACTA
CCAAAGCACCTGGTACAACAGCATCAACTACCAAAGCACCTGATACAACA
CCCGTTAAAACAACATCTGGGAAAGGAACAGGAGATGGCAAAACATCGGA
CAAGAAACCATCAGCTAGTCCAGCTAAAGTTGCATTAATCATCTTAgctg
ttcttattattttaacaGTATTCCTAGTTGGTTTGTATCTTAAAAAGAAG
AGAAGACTCAGCAGTCAACCTGCATATTATAATGACATTGCATTGAATGA
TCCATTGCGTTATGAAATGGACGAGGAACAAGGAGATGATGATGAATTAC
AATTGCTCACGTAA Coding sequence (CDS) from alignment at sc0000019_pilon:545280..546743+ >XLOC_041979 ID=XLOC_041979|Name=XLOC_041979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000019_pilon:545280..546743+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACATTGAAATTATTAAATGTGATATTTCTAAGCCTCTCATTGTG
CTCATTATGTCTGTCTTGTGGTCTTCAAAAAGCACTCAACGATATGACAA
ACCAAGTGAAAAACTTGACTATGAAGTGCAACCCTGATGGCTTGAAATGC
TCATCGTTCATTTGCAATGTTTTTCATAAAGATGAACCTGACAAGAAGTT
TTTCTCCATGGCTGGGTTTTGGCATTGTAAAGACAGTAAGGAGGTTTTTG
AGATTCATTATGAGGGAGCTAGTGCCACAGcgaacaaaaagtttaatgtG
AATACCAAACAACAGTTAAGTACAATTGTTGATGATAATCAAATCAAGCT
ATCAGTTGATGTCCTGTTTACAAATGAAGGCAacggaatgaaaaatttat
caatgaatTTCAACCTTGATTTAATTAATAACTCAAAGGTTTCAATTGCA
GAAAAGTTTTCATTGAAGCCAGAAATGTTAGCGATGGTGTGTAATTGTGA
AGGTATTAATGctcttgaaaatgaaatgacAACACGCTTCTCACTTATTA
AATCTGAGAAGACATTTTGTTGGGGTTTAACTGAAGATTGCTTATTACCG
TATTGTGTTGGAACAATTGAAAAACCTTATCTTATGCATTTCTCATTCAA
CGGTTCCATGTCCTGTCCAAATAAGCTACCAGAATACAATTTAACTTTGT
CCATCCATCATACAGAATCAATATCAATAAGCCAAACAAAGTTCCTTGTA
AACAAGTTTGATCCTGATATAGAGCTCAAGCATGAAATAGCTGAAAATGT
TCTCCTAAATCTCAATACAAAAAGCTACTTCACCAAAATCACAAAGGAAA
ACATTATTCTTCTGAATACTATTTCCGCAAAGATTTCTGGTAAATACAAA
GCAGATGCTACTCAAAACATCACTGTGAGTTTCCCAAATCACGGCTGTAC
ACCATCTGAAACAATAACAACCGCCAAACCTTCAACCACAAAAGCAACTA
CCAAAGCACCTGCTACAACAGATGGCAACATTGAAATTATTAAATGTGAT
ATTTCTAAGCCTCTCATTGTGCTCATTATGTCTGTCTTGTGGTCTTCAAA
AAGCACTCAACGATATGACAAACCAAGTGAAAAACTTGACTATGAAGTGC
AACCCTGATGGCTTGAAATGCTCATCGTTCATTTGCAATGTTTTTCATAA
AGATGAACCTGACAAGAAGTTTTTCTCCATGGCTGGGTTTTGGCATTGTA
AAGACAGTAAGGAGGTTTTTGAGATTCATTATGAGGGAGCTAGTGCCACA
GcgaacaaaaagtttaatgtGAATACCAAACAACAGTTAAGTACAATTGT
TGATGATAATCAAATCAAGCTATCAGTTGATGTCCTGTTTACAAATGAAG
GCAacggaatgaaaaatttatcaatgaatTTCAACCTTGATTTAATTAAT
AACTCAAAGGTTTCAATTGCAGAAAAGTTTTCATTGAAGCCAGAAATGTT
AGCGATGGTGTGTAATTGTGAAGGTATTAATGctcttgaaaatgaaatga
cAACACGCTTCTCACTTATTAAATCTGAGAAGACATTTTGTTGGGGTTTA
ACTGAAGATTGCTTATTACCGTATTGTGTTGGAACAATTGAAAAACCTTA
TCTTATGCATTTCTCATTCAACGGTTCCATGTCCTGTCCAAATAAGCTAC
CAGAATACAATTTAACTTTGTCCATCCATCATACAGAATCAATATCAATA
AGCCAAACAAAGTTCCTTGTAAACAAGTTTGATCCTGATATAGAGCTCAA
GCATGAAATAGCTGAAAATGTTCTCCTAAATCTCAATACAAAAAGCTACT
TCACCAAAATCACAAAGGAAAACATTATTCTTCTGAATACTATTTCCGCA
AAGATTTCTGGTAAATACAAAGCAGATGCTACTCAAAACATCACTGTGAG
TTTCCCAAATCACGGCTGTACACCATCTGAAACAATAACAACCGCCAAAC
CTTCAACCACAAAAGCAACTACCAAAGCACCTGCTACAACAGCAGCAACT
ACTAAAGCACCTGATACAACAGCAGCAACTACCAAAGCACCTGGTACAAC
AGCATCAACTACCAAAGCACCTGATACAACACCCGTTAAAACAACATCTG
GGAAAGGAACAGGAGATGGCAAAACATCGGACAAGAAACCATCAGCTAGT
CCAGCTAAAGTTGCATTAATCATCTTAgctgttcttattattttaacaGT
ATTCCTAGTTGGTTTGTATCTTAAAAAGAAGAGAAGACTCAGCAGTCAAC
CTGCATATTATAATGACATTGCATTGAATGATCCATTGCGTTATGAAATG
GACGAGGAACAAGGAGATGATGATGAATTACAATTGCTCACGTAACAGCA
ACTACTAAAGCACCTGATACAACAGCAGCAACTACCAAAGCACCTGGTAC
AACAGCATCAACTACCAAAGCACCTGATACAACACCCGTTAAAACAACAT
CTGGGAAAGGAACAGGAGATGGCAAAACATCGGACAAGAAACCATCAGCT
AGTCCAGCTAAAGTTGCATTAATCATCTTAgctgttcttattattttaac
aGTATTCCTAGTTGGTTTGTATCTTAAAAAGAAGAGAAGACTCAGCAGTC
AACCTGCATATTATAATGACATTGCATTGAATGATCCATTGCGTTATGAA
ATGGACGAGGAACAAGGAGATGATGATGAATTACAATTGCTCACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:545280..546743 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1024-1374:1114 |
| Aaloc | 1-1020:1 |
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