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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:563810..566148- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041978 ID=XLOC_041978|Name=XLOC_041978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2339bp|location=Sequence derived from alignment at sc0000019_pilon:563810..566148- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCAAAACAGCATTTTATATTTTCATTGTACAAGTTCTTTGTTT
TAAAACGTATGAAACATGCAAATGTGAACAGAGTGATATAGCATTTTGTT
ACAGATCAATTGACCCACATCGAGACATACCTACTGAATGTCACGCAGGG
TTAAAATGTGATTGTAGGTCAAAGAATTTGACTACATTTCCTACAAAACT
CTCTCAAACACCGGACAGAGTTATTTGGCTGAATTTAGCTGATAATCTTT
TGACCAATATTACGAGGGAAGATTTAGGAACATTTACAGGGCTACGTTTT
CTGGATCTGACTCAAAACCCTATTCAGTTTATTGGCTCAAAGACATTTCT
TAACTCCTCTGGTCTGATTGACCTTCGAATCCAAACTGACAGTTTGAAGT
ATAACTCATTACGCGGACTACGTAGCTTACGGGAATTACGGATCAACGGG
AATGGTATTTTACCGGAACTCCCGACCAAAGTGATGAGTCATCTAAAAGA
CTTGATACATTTGGTGATTTCCAATACAGCTGTAAAGAAATTACCAGAAA
ACTTTATGAATGGATATAAGCAGTTGTTGATTTTGGATATGAGAGATAAT
AAGATAGATTCGGTTGATGCAGGTAGTTAAAGCCCTTTTTCAAATTAACT
TGACTCCAATACACGAATTTCCTATTAGCAAATTCATATAAAAAAGTCAC
GAAAAACGTCGAGCAAAGCTCTGATTGGCTGAAGATTGCATACATAAACA
TATATTTTTTTAATATCCAGAGTATGAGATAATCTTTACATGTCTCATCC
AATAAGAGCTCTACTCGACATTTTTTCGTGACTTTTTCACATGAATCGGC
TAACAGGAAATTCGTGTATTGATCCAAATTTTCGTGAACAGGCCAAGAAA
GTTTCTTGAACAGACGGATGCGAAAGATTCATAGTAACCAGATCTCTATA
TTTCTATCCGAGTGTTGCAAAACCTTAAACCCATGGTCCCAACGGATCAA
TTTTGATAGACAAAACAGCTAGGAAGATGTAAAAACAGAAATCATCATTG
TTTTTTATTTCTTAGGTGCTTTCAACAACACGCCAAATATTAGGGAGCTC
CATCTATCGCACAACCACATCAAAACAGTCCATCACACCATCATTAAACA
TGCATCCAAATTGAAAGCACTCGATCTCAGTCATAATGATCTGACATCTT
TTGATAACGATTTCTTGGCCAATATACCAGAGTTGTATTTATTAGATCTT
AGCCATAACAAGTTGGTCAATATCACTTTAAATATTCCTATACTCACTCT
GGATCTCAGCTCTAATGCCATCACCACAACTGATGATATGCATTTCTCTA
ATTCATGCTGGATTCAGAATCTGAACGTTGCCAACAACTCAATCATCAAG
TTAACCAGATTCTATCAGATTGATAAGGACTTAATACCATCGCAATACAC
CACAAAACTACAGAAAGTTGATTTTTCATATAACGGTATACAAACCATTG
ATTCTGATGTTTTTGAACGTTTTTACGAGCTTAAGAAACTGAATCTTGAA
ACGAATTTGCTATCAAATATTGATCATTTGATTTTATCGCGAAATGTATT
TCGTTTATATTTGGCGGATAATAAGTTTACAAGATTCCCAAACATCATTG
ATAAACTCAAATTTATTTCGTGGTTGGATCTATCAAACAATAACATTAAA
GATATCCCTTTAAAGAAGCTTGTTGATTTAATATCTTTGCGTTATCTTAA
CTTGAAAAACAACCTTCTGTCACATTTGCCTGTTGATTTTCTCTCAGGAA
CCAAGTTATATGATTCATTTGATCTCTCTGATAATCCGTTGGTATGCACA
TGCGCATTAAGAAATATCTTGACATTGAGTACGACAGAAAATGCAATTAT
TTTAGGAAACTGTACAGAAAATGAAACAATCACAATCGATTTAAAAGTAT
TTAAAGATATTGCAAACTATAATAACATAACCACGGCAAAAAGTACGGCA
AAACCTGATCCAATTGACACGACTTCAACAATGACGGAAACGCTGCCCGA
CGAAACAACGACAAAACAGAAAATGACGACGATAAGTTCACCAACAAAGG
GTAAGCTACCGGCAACAAGGAAAACGACAACGTCAGAATCTCTACGAAAG
GAGTTCACCACGTCTATTGTCTTCAACGTGATTCTGGCCGTTGTGGTTCT
ATTATTGATTTTCCTGGTTGTGGTTCTATATGTGAAATATAAGAAAGTTT
ATTCTTTGAATGCATATCATACTAAAAGGGATACAGTACAAATGGAGAAT
ACTCATGATAAAATTGCATATTCAACAGAAGAAAATTAA Coding sequence (CDS) from alignment at sc0000019_pilon:563810..566148- >XLOC_041978 ID=XLOC_041978|Name=XLOC_041978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3792bp|location=Sequence derived from alignment at sc0000019_pilon:563810..566148- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCAAAACAGCATTTTATATTTTCATTGTACAAGTTCTTTGTTT
TAAAACGTATGAAACATGCAAATGTGAACAGAGTGATATAGCATTTTGTT
ACAGATCAATTGACCCACATCGAGACATACCTACTGAATGTCACGCAGGG
TTAAAATGTGATTGTAGGTCAAAGAATTTGACTACATTTCCTACAAAACT
CTCTCAAACACCGGACAGAGTTATTTGGCTGAATTTAGCTGATAATCTTT
TGACCAATATTACGAGGGAAGATTTAGGAACATTTACAGGGCTACGTTTT
CTGGATCTGACTCAAAACCCTATTCAGTTTATTGGCTCAAAGACATTTCT
TAACTCCTCTGGTCTGATTGACCTTCGAATCCAAACTGACAGTTTGAAGT
ATAACTCATTACGCGGACTACGTAGCTTACGGGAATTACGGATCAACGGG
AATGGTATTTTACCGGAACTCCCGACCAAAGTGATGAGTCATCTAAAAGA
CTTGATACATTTGGTGATTTCCAATACAGCTGTAAAGAAATTACCAGAAA
ACTTTATGAATGGATATAAGCAGTTGTTGATTTTGGATATGAGAGATAAT
AAGATAGATTCGGTTGATGCAGATGGTTCTCAAAACAGCATTTTATATTT
TCATTGTACAAGTTCTTTGTTTTAAAACGTATGAAACATGCAAATGTGAA
CAGAGTGATATAGCATTTTGTTACAGATCAATTGACCCACATCGAGACAT
ACCTACTGAATGTCACGCAGGGTTAAAATGTGATTGTAGGTCAAAGAATT
TGACTACATTTCCTACAAAACTCTCTCAAACACCGGACAGAGTTATTTGG
CTGAATTTAGCTGATAATCTTTTGACCAATATTACGAGGGAAGATTTAGG
AACATTTACAGGGCTACGTTTTCTGGATCTGACTCAAAACCCTATTCAGT
TTATTGGCTCAAAGACATTTCTTAACTCCTCTGGTCTGATTGACCTTCGA
ATCCAAACTGACAGTTTGAAGTATAACTCATTACGCGGACTACGTAGCTT
ACGGGAATTACGGATCAACGGGAATGGTATTTTACCGGAACTCCCGACCA
AAGTGATGAGTCATCTAAAAGACTTGATACATTTGGTGATTTCCAATACA
GCTGTAAAGAAATTACCAGAAAACTTTATGAATGGATATAAGCAGTTGTT
GATTTTGGATATGAGAGATAATAAGATAGATTCGGTTGATGCAGGTGCTT
TCAACAACACGCCAAATATTAGGGAGCTCCATCTATCGCACAACCACATC
AAAACAGTCCATCACACCATCATTAAACATGCATCCAAATTGAAAGCACT
CGATCTCAGTCATAATGATCTGACATCTTTTGATAACGATTTCTTGGCCA
ATATACCAGAGTTGTATTTATTAGATCTTAGCCATAACAAGTTGGTCAAT
ATCACTTTAAATATTCCTATACTCACTCTGGATCTCAGCTCTAATGCCAT
CACCACAACTGATGATATGCATTTCTCTAATTCATGCTGGATTCAGAATC
TGAACGTTGCCAACAACTCAATCATCAAGTTAACCAGATTCTATCAGATT
GATAAGGACTTAATACCATCGCAATACACCACAAAACTACAGAAAGTTGA
TTTTTCATATAACGGTATACAAACCATTGATTCTGATGTTTTTGAACGTT
TTTACGAGCTTAAGAAACTGAATCTTGAAACGAATTTGCTATCAAATATT
GATCATTTGATTTTATCGCGAAATGTATTTCGTTTATATTTGGCGGATAA
TAAGTTTACAAGATTCCCAAACATCATTGATAAACTCAAATTTATTTCGT
GGTTGGATCTATCAAACAATAACATTAAAGATATCCCTTTAAAGAAGCTT
GTTGATTTAATATCTTTGCGTTATCTTAACTTGAAAAACAACCTTCTGTC
ACATTTGCCTGTTGATTTTCTCTCAGGAACCAAGTTATATGATTCATTTG
ATCTCTCTGATAATCCGTTGGTATGCACATGCGCATTAAGAAATATCTTG
ACATTGAGTACGACAGAAAATGCAATTATTTTAGGAAACTGTACAGAAAA
TGAAACAATCACAATCGATTTAAAAGTATTTAAAGATATTGCAAACTATA
ATAACATAACCACGGCAAAAAGTACGGCAAAACCTGATCCAATTGACACG
ACTTCAACAATGACGGAAACGCTGCCCGACGAAACAACGACAAAACAGAA
AATGACGACGATAAGTTCACCAACAAAGGGTAAGCTACCGGCAACAAGGA
AAACGACAACGTCAGAATCTCTACGAAAGGAGTTCACCACGTCTATTGTC
TTCAACGTGATTCTGGCCGTTGTGGTTCTATTATTGATTTTCCTGGTTGT
GGTTCTATATGTGAAATATAAGAAAGTTTATTCTTTGAATGCATATCATA
CTAAAAGGGATACAGTACAAATGGAGAATACTCATGATAAAATTGCATAT
TCAACAGAAGAAAATTAAGTGCTTTCAACAACACGCCAAATATTAGGGAG
CTCCATCTATCGCACAACCACATCAAAACAGTCCATCACACCATCATTAA
ACATGCATCCAAATTGAAAGCACTCGATCTCAGTCATAATGATCTGACAT
CTTTTGATAACGATTTCTTGGCCAATATACCAGAGTTGTATTTATTAGAT
CTTAGCCATAACAAGTTGGTCAATATCACTTTAAATATTCCTATACTCAC
TCTGGATCTCAGCTCTAATGCCATCACCACAACTGATGATATGCATTTCT
CTAATTCATGCTGGATTCAGAATCTGAACGTTGCCAACAACTCAATCATC
AAGTTAACCAGATTCTATCAGATTGATAAGGACTTAATACCATCGCAATA
CACCACAAAACTACAGAAAGTTGATTTTTCATATAACGGTATACAAACCA
TTGATTCTGATGTTTTTGAACGTTTTTACGAGCTTAAGAAACTGAATCTT
GAAACGAATTTGCTATCAAATATTGATCATTTGATTTTATCGCGAAATGT
ATTTCGTTTATATTTGGCGGATAATAAGTTTACAAGATTCCCAAACATCA
TTGATAAACTCAAATTTATTTCGTGGTTGGATCTATCAAACAATAACATT
AAAGATATCCCTTTAAAGAAGCTTGTTGATTTAATATCTTTGCGTTATCT
TAACTTGAAAAACAACCTTCTGTCACATTTGCCTGTTGATTTTCTCTCAG
GAACCAAGTTATATGATTCATTTGATCTCTCTGATAATCCGTTGGTATGC
ACATGCGCATTAAGAAATATCTTGACATTGAGTACGACAGAAAATGCAAT
TATTTTAGGAAACTGTACAGAAAATGAAACAATCACAATCGATTTAAAAG
TATTTAAAGATATTGCAAACTATAATAACATAACCACGGCAAAAAGTACG
GCAAAACCTGATCCAATTGACACGACTTCAACAATGACGGAAACGCTGCC
CGACGAAACAACGACAAAACAGAAAATGACGACGATAAGTTCACCAACAA
AGGGTAAGCTACCGGCAACAAGGAAAACGACAACGTCAGAATCTCTACGA
AAGGAGTTCACCACGTCTATTGTCTTCAACGTGATTCTGGCCGTTGTGGT
TCTATTATTGATTTTCCTGGTTGTGGTTCTATATGTGAAATATAAGAAAG
TTTATTCTTTGAATGCATATCATACTAAAAGGGATACAGTACAAATGGAG
AATACTCATGATAAAATTGCATATTCAACAGAAGAAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:563810..566148 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-1896:1273 |
| Aaloc | 1-621:2340 |
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