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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:573613..575106- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041977 ID=XLOC_041977|Name=XLOC_041977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1494bp|location=Sequence derived from alignment at sc0000019_pilon:573613..575106- (Clytia hemisphaerica_ch_hm2_pilon)
GCAATTTATCGAATACATATAAAAAGAAACATGTTGCATTTCACAATAAA
AGTTTGTTCGTTGATGCTAATAATAGTATCGATTTGTCATACAGCACCAA
CTATGAACCCTTCAACAACACATGAAGAAGCCACAACCACAACAACAACG
ACAATACCGCCTACAACAGCTGAATTAACGACCAAACACAAGAAAGAGCC
AGAACAGTCAACACCTACAACAACTACAACTATACCACCAACTATGACTG
AGACGTCAACAAAACACAACGAACAGCCAGAACGACCAACATCTACAAAA
GCTACAACCACAACAACTACAACACCCACAACAACCACACCGCATACTGC
TGAGGCATCAACAAAACATAAGAAAGAAACAGAACAACCAACAACTGTGA
CCACACCAAATATGACTGAGACATCAACAAAACCCAACAAAGCGCCAGAA
CAGTCAACACCCTCAAAAGCAACAACCACAACGCCAACTGCTGAGACATC
AACCAAACACAACGAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAA
CCACACCACCTACTGCTGAGATATCAACCAAACACAACGAAGGACCAGAA
CAGTCAACACCCTCAAAAGCAACAACCACAACGCCAACTGCTGAGACATC
AACAAAACACAACGAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAA
CCACACCACCTACTGCTGAGATATCAACCAAACACAACGAAGGACCAGAA
CAGTCAACACCCTCAAAAGCAACAACCACAACGCCAACTGCTGAGACATC
AACAAAACACAACGAAGGACCAGAACAGTCAACAACAGCTACAACCACGC
CACCTTCAGCTGAACAAACAACAAAACACAAGAAAGAAACAGAACAACTA
ACATCTACAAAAGCAGCAACCACAGCAACGACAACCACAACGCCAACTGC
TGAGACATCAACAAAACACAAGAAAGAACCGAAACAATCAACAACCACAA
CAACTGCAACGCAATCTACTACCAAAACAACAACATCTTCCCCAAGTTTT
GAAATAGATTGTCAATTCCAAGATGGTTCATCTTTCAAATCTGGTGATAT
CATATCTCAACATTATCATCCTGTTACCAAAAAACTATGCTTCAAAGTTT
ATTGTGGTAACTTGGGCTCTATCAAATCCCAAAACTTCGATTGTGAAGAT
GAGAAAATAACAGAAACGACCCCAACAACGACCACCAAAGGTTCGGATGT
CCAAGGCTCTGGCAAGAGAGGATCATCTTCATCAAAAACAACTGAAAATC
CTTTACGTAGGAAACATACTGCATCAATCACATTCAATATTTTGTTAGCC
CTCCTGATTATCATCCTACTTGTTGCTTTCATATCAACTTATCGTAAATA
TAAAAAGACATTTCATTTGAATGCTTTTCACACTAAACGGGACACAGATA
TTCAGCTTGAAAGTGCTTACTCAAATTCGATGGACGATTTATGA Coding sequence (CDS) from alignment at sc0000019_pilon:573613..575106- >XLOC_041977 ID=XLOC_041977|Name=XLOC_041977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2520bp|location=Sequence derived from alignment at sc0000019_pilon:573613..575106- (Clytia hemisphaerica_ch_hm2_pilon)
GCAATTTATCGAATACATATAAAAAGAAACATGTTGCATTTCACAATAAA
AGTTTGTTCGTTGATGCTAATAATAGTATCGATTTGTCATACAGCACCAA
CTATGAACCCTTCAACAACACATGAAGAAGCCACAACCACAACAACAACG
ACAATACCGCCTACAACAGCTGAATTAACGACCAAACACAAGAAAGAGCC
AGAACAGTCAACACCTACAACAACTACAACTATACCACCAACTATGACTG
AGACGTCAACAAAACACAACGAACAGCCAGAACGACCAACATCTACAAAA
GCTACAACCACAACAACTACAACACCCACAACAACCACACCGCATACTGC
TGAGGCATCAACAAAACATAAGAAAGAAACAGAACAACCAACAACTGTGA
CCACACCAAATATGACTGAGACATCAACAAAACCCAACAAAGCGCCAGAA
CAGTCAACACCCTCAAAAGCAACAACCACAACGCCAACTGCTGAGACATC
AACCAAACACAACGAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAA
CCACACCACCTACTGCTGAGATATCAACCAAACACAACGAAGGACCAGAA
CAGTCAACACCCTCAAAAGCAACAACCACAACGCCAACTGCTGAGACATC
AACAAAACACAACGAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAA
CCACACCACCTACTGGCAATTTATCGAATACATATAAAAAGAAACATGTT
GCATTTCACAATAAAAGTTTGTTCGTTGATGCTAATAATAGTATCGATTT
GTCATACAGCACCAACTATGAACCCTTCAACAACACATGAAGAAGCCACA
ACCACAACAACAACGACAATACCGCCTACAACAGCTGAATTAACGACCAA
ACACAAGAAAGAGCCAGAACAGTCAACACCTACAACAACTACAACTATAC
CACCAACTATGACTGAGACGTCAACAAAACACAACGAACAGCCAGAACGA
CCAACATCTACAAAAGCTACAACCACAACAACTACAACACCCACAACAAC
CACACCGCATACTGCTGAGGCATCAACAAAACATAAGAAAGAAACAGAAC
AACCAACAACTGTGACCACACCAAATATGACTGAGACATCAACAAAACCC
AACAAAGCGCCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCC
AACTGCTGAGACATCAACCAAACACAACGAAGGACCAGAACAGTCAACAC
CCTCAAAAGCAACAACCACACCACCTACTGCTGAGATATCAACCAAACAC
AACGAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCC
AACTGCTGAGACATCAACAAAACACAACGAAGGACCAGAACAGTCAACAC
CCTCAAAAGCAACAACCACACCACCTACTGCTGAGACATCAACAAAACAC
AAGAAAGAACCGAAACAATCAACAACCACAACAACTGCAACGCAATCTAC
TACCAAAACAACAACATCTTCCCCAAGTTTTGAAATAGATTGTCAATTCC
AAGATGGTTCATCTTTCAAATCTGGTGATATCATATCTCAACATTATCAT
CCTGTTACCAAAAAACTATGCTTCAAAGTTTATTGTGGTAACTTGGGCTC
TATCAAATCCCAAAACTTCGATTGTGAAGATGAGAAAATAACAGAAACGA
CCCCAACAACGACCACCAAAGGTTCGGATGTCCAAGGCTCTGGCAAGAGA
GGATCATCTTCATCAAAAACAACTGAAAATCCTTTACGTAGGAAACATAC
TGCATCAATCACATTCAATATTTTGTTAGCCCTCCTGATTATCATCCTAC
TTGTTGCTTTCATATCAACTTATCGTAAATATAAAAAGACATTTCATTTG
AATGCTTTTCACACTAAACGGGACACAGATATTCAGCTTGAAAGTGCTTA
CTCAAATTCGATGGACGATTTATGACTGAGACATCAACAAAACACAAGAA
AGAACCGAAACAATCAACAACCACAACAACTGCAACGCAATCTACTACCA
AAACAACAACATCTTCCCCAAGTTTTGAAATAGATTGTCAATTCCAAGAT
GGTTCATCTTTCAAATCTGGTGATATCATATCTCAACATTATCATCCTGT
TACCAAAAAACTATGCTTCAAAGTTTATTGTGGTAACTTGGGCTCTATCA
AATCCCAAAACTTCGATTGTGAAGATGAGAAAATAACAGAAACGACCCCA
ACAACGACCACCAAAGGTTCGGATGTCCAAGGCTCTGGCAAGAGAGGATC
ATCTTCATCAAAAACAACTGAAAATCCTTTACGTAGGAAACATACTGCAT
CAATCACATTCAATATTTTGTTAGCCCTCCTGATTATCATCCTACTTGTT
GCTTTCATATCAACTTATCGTAAATATAAAAAGACATTTCATTTGAATGC
TTTTCACACTAAACGGGACACAGATATTCAGCTTGAAAGTGCTTACTCAA
ATTCGATGGACGATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:573613..575106 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-1260:544 |
| Aaloc | 1-714:1495 |
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