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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:619204..622305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041974 ID=XLOC_041974|Name=XLOC_041974|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3102bp|location=Sequence derived from alignment at sc0000019_pilon:619204..622305- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTTCATACCATCTTATTGGTGCTCTCTTTGATTCGCCCCAATAC
TGGTGAACAAGATATATTGTACCCATATCCATCCGTTAGACATCATTTAG
ACCCTAGGCGCTCACATCGTTACGTTCGTGACTGTCAACCTAAAGAACAT
GGAAACCTTACACACGAAACTATTAAAACATTGAATTCGAGCAAAGAAAT
TCAAGTTAATTATTTCAGGAAAGATTTCACTGGCTTTGGTTTACAATTTG
GACATCATTCTATTATTAAGGATCCAACATCTATGATCTCAATACACCAG
CCTCTAGATGGTGGTTGTCAGAACCTTTCTACTAGTACGGTTAAGGATAC
TGCTATTCAAAATGGCTGCTACATAGCTACAAATGCAGGCTTTTTTGTGC
CGAGTGACCGCTCACCTTATGGTGCTTGCCTCGGAAACATTATTTCAGAT
TCAAAAATAGTACGAAAAACGGGTATACAAAATGCAAACTTTGGAATCCG
TCGGGATGGTTCAATAGTAATCGGGTATTTATCTGAAGATGAAGTAACCG
AAACGAAAAATCCGTTTATTCAATTAGTAACCGGTGTAGGATGGATTATT
CGTAATGGTAAAAGTTACGTGACCGAGAGTATAAAAGCTGAGTGCGAAGA
CACACAAACGACATCCAGTATGGCGCGATTCTTCTCAGTACAATCTGCAC
GGACATTGCTTGGTGTGGATGGTAATGGATATGTGCATTTGGTTACTGTT
GATGGTAAAACTAATTCAAGAGGGTATAACACACTGCAGTATTTTTTAAG
CTATACATATCTCTTTTAAAAAATTTCTAAAATCCAGTTTTCGTATAAAT
GAAAAATTGTATGGGGTTTTGAGGATATTAGATGTGGTGCATACATATGA
AAAGGACTGGATATCCAGGAGGTTAGCTTAAAAAAGGCTTTTTTGTAGGT
CATTTTTGAGGATATCCTGGGGGTCATCCGAAAAAAAATTAGAAAATCGG
AGATATCCAAGGGCCAAATATTTTGAAATAGGAAAAAAATAGACACTACA
AAATTCTATGCCAAACCTACATAGTTCGGACCCCCCACCCCATTTGGGGG
TGAAATAATATGCTTAAAACCATACACAATTTTTTTCTGAAATCGTCCAT
TCATTTCATGGTAGTTATTTTCATTGACTGACTCTTGATTTGCTTGATTA
AAAAAGAAATTCGAAACAAGCAGCTTGAATACAACGTATTACAACGTATG
AAAGTATTGCCCTGTTTTAATGAGATTGAATTTTCGTTTCGTTTTCATTC
TCTAGAATCAACCTACCAGCCGCAGTGAAGTATTTGATCGAACAAGGTGT
TCAGAATGCAATCAATTTGGATGGTGGAGGATCGGCAACTTATGTCATCA
ACTCAACTGTGGTCAATTACCCTTCAGATACACACCATGATCAACCAGAG
TATAGATTGTTGTATCTATGATATGCACCATTGCAATGTTTTCTGACATC
ACATCACGGCTGTTTGGTTGTAAGTGACGTAAAATCAATCAATACGTCAC
TTGCAACCAATCAGCTGCTGGGTCCGTGGAAGACATTGCAATGGTGCATA
TCATGAATTTTATTAGTCAACTTTTCTAAAACATACCTTGATGATAATGA
TAAAAACCAGTTTGATTTTATAAATGAATCGTTCACAGTGAAAAGCTGCA
ATTTTGAGGAAAAATCTCGCTTTTTCACCGTTCATTAATATGATAGATTA
TAGCTTTTCAGTGTAAATTTATCCAAATATCAATTTTTGAGTATAGTTGG
GTCGATTTGATTAGTTCTCGTTTTTACTCAGAGCTCGATCATTGAGATCG
ATTTTATTGAGCAATACGAACCTAATTCTAAATTTGTATTTGCTTTGACT
GTCCCTTTCCATTACTTATCATTTCATCCTTCGTGTTTTAGGATTTTGGT
TCCACGTAAAGTCAGTTCCATTATTTGTGTGAAGAAAGAAATGAACGGTG
ATGTCACTCCAGGTATTCTTTCTCTCACTTGACAGTTGTTTCAGTCTAGA
TATTCCCTTACTTGTGCCTCACGAGGTAAAAATAGGAACATTCTCTTAAC
GGGACATAAAAGTATTAAAATGTAAACATTGCGCGAACCACAATTAAAAC
TACGTGTCCAAAACAAACTTGTAAAACAATTGAAACAATCAAAATCAGCC
ATATTTGTTTTTATTTTTTATTTTGACATGTGACATTTGTTTTGATTTTG
TATCCCGCTGCATATGATTTATTTACAAATTTCGCTAGTACTTTTATGTC
CCTTTAAATGCCGCCATCTAGATGACCTTAAAGTCTGAAGTCGCCCAGGG
GTTATCGAATTTTGGTTGACTTAAGAATTTTTTTTTACTTTCTACAATAC
TTCACAATACTATTTTAAAATCTCTTGGCCTTTTTTTAGAACACATGGCA
TCGCTTAGCTACTGTTGCAAGTAAGTCTAATGTTATAATAACGGTTGATA
GCAATCTATCGGCGCCGTTTGTTACTTCTTTCGAAGTGACACCTCAGAAC
ACATTCTAAAGTCAAAAATTGTAGAATTTAACGTTGTCATTCGACCATTT
TGACACTGCTATCTTTGAGTGAGATGATAAATAGATATATTGAATTCCCA
AGATGATTGAAAAGGTTGTGGATATTTTTTTTGGCTATAATTTTTTTTTA
CAGTATACTGAATATAATTAGTTTTGAATAAGATACATAAATTACCCCAA
AAATGAGAAAATAGCAAGACCTGTGAAAGAAAACAAAACAAAAGGTTTTG
AATATTGAAATATTAAGTATTCAAGTCATTAAATTTCGTATAAATCATGA
GGATTTCCCTATTTTCGTTTCTACAGCCGCAATTACTTCTTGATCATTGG
GTTGACAGTGATTATTGGTTTTTCGTGTCTATTGCATGTTCATTTCTACA
CATTGTACCAACACTACCGAAACAAAGTTAAAGATTTGTTGAGTGGTCAA
CAGAAAAAAGAAGCATTACAAAGTCTCTTGCAACAAGCTAATAATGAGTT
GTCGTCAGAGTTTGATAGTGATTTTGACGATTTTGAGGATGATGACTTAT
AG Coding sequence (CDS) from alignment at sc0000019_pilon:619204..622305- >XLOC_041974 ID=XLOC_041974|Name=XLOC_041974|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2490bp|location=Sequence derived from alignment at sc0000019_pilon:619204..622305- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTTCATACCATCTTATTGGTGCTCTCTTTGATTCGCCCCAATAC
TGGTGAACAAGATATATTGTACCCATATCCATCCGTTAGACATCATTTAG
ACCCTAGGCGCTCACATCGTTACGTTCGTGACTGTCAACCTAAAGAACAT
GGAAACCTTACACACGAAACTATTAAAACATTGAATTCGAGCAAAGAAAT
TCAAGTTAATTATTTCAGGAAAGATTTCACTGGCTTTGGTTTACAATTTG
GACATCATTCTATTATTAAGGATCCAACATCTATGATCTCAATACACCAG
CCTCTAGATGGTGGTTGTCAGAACCTTTCTACTAGTACGGTTAAGGATAC
TGCTATTCAAAATGGCTGCTACATAGCTACAAATGCAGGCTTTTTTGTGC
CGAGTGACCGCTCACCTTATGGTGCTTGCCTCGGAAACATTATTTCAGAT
TCAAAAATAGTACGAAAAACGGGTATACAAAATGCAAACTTTGGAATCCG
TCGGGATGGTTCAATAGTAATCGGGTATTTATCTGAAGATGAAGTAACCG
AAACGAAAAATCCGTTTATTCAATTAGTAACCGGTGTAGGATGGATTATT
CGTAATGGTAAAAGTTACGTGACCGAGAGTATAAAAGCTGAGTGCGAAGA
CACACAAACGACATCCAGTATGGCGCGATTCTTCTCAGTACAATCTGCAC
GGACATTGCTTGGTGTGGATGGTAATGGATATGTGCATTTGGTTACTGTT
GATGGTAAAACTAATTCAAGAGGATGTATTTTCATACCATCTTATTGGTG
CTCTCTTTGATTCGCCCCAATACTGGTGAACAAGATATATTGTACCCATA
TCCATCCGTTAGACATCATTTAGACCCTAGGCGCTCACATCGTTACGTTC
GTGACTGTCAACCTAAAGAACATGGAAACCTTACACACGAAACTATTAAA
ACATTGAATTCGAGCAAAGAAATTCAAGTTAATTATTTCAGGAAAGATTT
CACTGGCTTTGGTTTACAATTTGGACATCATTCTATTATTAAGGATCCAA
CATCTATGATCTCAATACACCAGCCTCTAGATGGTGGTTGTCAGAACCTT
TCTACTAGTACGGTTAAGGATACTGCTATTCAAAATGGCTGCTACATAGC
TACAAATGCAGGCTTTTTTGTGCCGAGTGACCGCTCACCTTATGGTGCTT
GCCTCGGAAACATTATTTCAGATTCAAAAATAGTACGAAAAACGGGTATA
CAAAATGCAAACTTTGGAATCCGTCGGGATGGTTCAATAGTAATCGGGTA
TTTATCTGAAGATGAAGTAACCGAAACGAAAAATCCGTTTATTCAATTAG
TAACCGGTGTAGGATGGATTATTCGTAATGGTAAAAGTTACGTGACCGAG
AGTATAAAAGCTGAGTGCGAAGACACACAAACGACATCCAGTATGGCGCG
ATTCTTCTCAGTACAATCTGCACGGACATTGCTTGGTGTGGATGGTAATG
GATATGTGCATTTGGTTACTGTTGATGGTAAAACTAATTCAAGAGGAATC
AACCTACCAGCCGCAGTGAAGTATTTGATCGAACAAGGTGTTCAGAATGC
AATCAATTTGGATGGTGGAGGATCGGCAACTTATGTCATCAACTCAACTG
TGGTCAATTACCCTTCAGATACACACCATGATCAACCAGAAATCAACCTA
CCAGCCGCAGTGAAGTATTTGATCGAACAAGGTGTTCAGAATGCAATCAA
TTTGGATGGTGGAGGATCGGCAACTTATGTCATCAACTCAACTGTGGTCA
ATTACCCTTCAGATACACACCATGATCAACCAGAGATTTTGGTTCCACGT
AAAGTCAGTTCCATTATTTGTGTGAAGAAAGAAATGAACGGTGATGTCAC
TCCAGGATTTTGGTTCCACGTAAAGTCAGTTCCATTATTTGTGTGAAGAA
AGAAATGAACGGTGATGTCACTCCAGAACACATGGCATCGCTTAGCTACT
GTTGCAAAACACATGGCATCGCTTAGCTACTGTTGCAACCGCAATTACTT
CTTGATCATTGGGTTGACAGTGATTATTGGTTTTTCGTGTCTATTGCATG
TTCATTTCTACACATTGTACCAACACTACCGAAACAAAGTTAAAGATTTG
TTGAGTGGTCAACAGAAAAAAGAAGCATTACAAAGTCTCTTGCAACAAGC
TAATAATGAGTTGTCGTCAGAGTTTGATAGTGATTTTGACGATTTTGAGG
ATGATGACTTATAGCCGCAATTACTTCTTGATCATTGGGTTGACAGTGAT
TATTGGTTTTTCGTGTCTATTGCATGTTCATTTCTACACATTGTACCAAC
ACTACCGAAACAAAGTTAAAGATTTGTTGAGTGGTCAACAGAAAAAAGAA
GCATTACAAAGTCTCTTGCAACAAGCTAATAATGAGTTGTCGTCAGAGTT
TGATAGTGATTTTGACGATTTTGAGGATGATGACTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:619204..622305 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1245:226 |
| Aaloc | 991-1017:662 |
| Aaloc | 919-987:1161 |
| Aaloc | 775-915:1797 |
| Aaloc | 1-771:3103 |
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