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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:648460..652637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041972 ID=XLOC_041972|Name=XLOC_041972|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4178bp|location=Sequence derived from alignment at sc0000019_pilon:648460..652637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAGTGTCTATGGCAACCAATTGAGCAGTGTCTCTTTGCTGACCG
CTTACACCATAATAGAAATAATAATGAAAATGTGGAAAGAACACCAACCA
TACATGACACTATACTTCAAGAAATCCCTATCCTTATTCAAAGAGGTTTT
GCAGAAAATATTATAACATTTGTTTATGACATGAATAAAAAATATGAGAA
ATATCAGCCAATCTTGGAAGTTTTGGCAACAATGGCACTCTATGGAAACG
AAGATGTAACACGAAAGGTCTTAGAAGCTTTACCAAAAATTTGTAATATC
CCAACAAAGCTGATGTACTTTTATGAATTGACTCGAAAATATGATCATAT
CAAAAATGTTTGGGATAACCAACATAATGGATGGGTTCACAAATGCATTT
TGGAATGGGCAGGGCAGTTCGACAATGATGATATTATGACGCTCCTCTAT
TATTTTACAAAGTATAAAAGAAGACATGGACACAGACTTTTGGATGTAAG
CTATCTTCTCTAAATCTTTCATTAACAAAGCCTTATCAAAGTCTTCCAAA
ATTCAACATATCAAAGGGACATGAAAGTAGTAAAATGCAAACATTTTGCA
AACAATGTTTCATTATAGAGAACAATTAAAATTATGTGTCCAAAACAAAC
TTGTAAAACGATTGAAACAATCAGAATTACTTTGACATGTGACATTTGTT
TTGATTTTGTATCCCGCTGTTACGGTTTGTTTACAAATTTTGTAAAGTCC
CTTTAAGTTTTGAATTATTTTGTTCCTACTGTATCTAATTTTCATTTCAC
ATTGGTCATTAAAATTTGATTATTTCAAATGGAGCTATAATATTGAAATT
GATAAAGTATGATTTGCTGAGCAATTAATTTGTTTTTGGCCTTTTTCACC
AGTTTTAGCATTAATCTTGTCGAAAATACCTCAAAAGTGAAAAAGTTCTC
ATTGGTATAGTTTTTGAATCGTATATTTAAGCAAGGTTATTTTTAAGATC
CTGCCTAACATTTACTAAATTAATTCATAATTAATTATGAATTATGAATT
TTATTTAAGTTATGGAACACTTCAAGACCCAACAACTTAGATGATCGTGT
GGAGTTTGCCTTTGAACTGATAATTCATTATGCAGAGTATGGGTACAATG
GAGACAATGGAGTTGCAAATGTAGACATATTTCAACAATATTTTACTGGA
AATCCGATAGGTATCAACCAGGATATTTCACGCATCGTTGAATTTATTAT
ATATTTTGAAAGATTGAAGAGAGCTCAAACGGCTGCAGACTGTATACAGG
TGCTTGCTGAGAAATGTGGGCAAGTGGATCAAATGCCAAGCTGTTATGAT
GAGGCTAACAGTGATAAAAAAGAGCATTGTGCATTGGTTTTTGAACATGT
CCTACATCGATTTCATAAAAATCGAGAGGTAAGCCTTTATTGATAAAATA
TTTATTGATATATTTATTGCAATGTTATTATATTTTTTTTACATATGTCC
ATAACGCAAGAAATCACAAGAAATTAGTCTGGTGGTATAATAGCCCTTTT
CATAAATTACGTCACAAACATCACTTGCCTCGTATTCAAACAATTACCAT
GGTGATTATGTCCCTTGAGACATTAAATGCTTTTTTTCTATAATAGAAAG
TAGTTTTAACAAAATCCGTTGGGAGTTAATCATGGCAATAATTTCAAAAC
GAGGTAAGTGATGTTCGTGACGTAATTTATTAAAAAGTCTATTCTAACAG
TTTTTAGCGCGAAAGCTGGAAATTTCTAGTAGTTTTAATCTAATATTTGT
CTTGTTTTTTATACATAAAAAAAGATCTGTAAGAAATATTGAGTGTTTTT
GAAAGAAGAAATAATTTTTGATTTATTACTTTTCTAAAAATCATTTTTAG
GTTTGGAGAATATTTTTGAAGGCTGGATTACCAATACATCGTTTAATATG
GAACATAAGAAACATTGTTCAAAATGAAAGCCTTATTGGTGATGAAGAAA
TTGTTGATTTGGTCTGTCAAACACTTGAGAAAAATCACCAGCATATTTCA
GCGCTGACGGTTGGTTTATATCCTAAAAACATTTTCTTCGCTTACTGCAA
AATCAATAACTATGAGAAGAGATGTAACAATATTATTGATGGCAGGTTAT
GATGATCTCACCTCTGAATCATGAAACACTTAATTCTTTATGGATAATAA
TCTACAATAAAGAAAAAGAAGTTTTTATATGTTTCAAAAGAACATTTTAA
AAAACTTCAAAACTAGTTTACACATCGCTTGTTTGCTCATGGTAGTTTAG
TTCGTTGAAATTTGGTCTGGTGCCTAAAGAACAGCCCCCCTGTTTGTTAG
ACTAGAGTCTACTTTTGGCTGAACTTTGCTTTTCGATAATTTTTTATGAC
GCTGAGTCCAGTGAAGTAGACTAGGAGCGTTTGGCGAGATCGCCATTTTG
AAAGAAAATGTTAAGAATCCAAATAATAATAAAACTATGAGAAACAAACA
TCAATAACAGATTTGCAATCCCTTATTCTCAAATAAAAACATCAAACATT
GCTTCATACTGTTTTTACCTTCCAAAAACAACTAAAATCTGACAGACTGT
TTGTTTGTTATCTTCAAACCTGCCCTGCTCTGTTTATAAGGCCCCTGAGA
GTCTCTGTCTATCGTATGTGAAAAATCACTTAGCCTTCTTTACTTTATAG
GTTCTGAAGCCTTACATGGAATGTTTAAAAATTGCACAAGACATTCAGGA
AGGAAATCGCACAAGTTTTCGAAGAATCCTTTCTGCTACCAAGAATTTAT
ACATTAGAAGACTGGTAAAAATGAATCATTTTTTCAAACGTTCCTTCCCT
CCCCCGCCGGAGGATGATTGTAAAACTTGACAGAAAATCGTAATTTTATT
CATTTCAATTAGTTTTCGAGCACTACCATAATACCTCCTAGTTCGAACAG
TGCTAAAAACTTTTAAAATTGAATAGTCAATAGAAACTATTATATCATTT
CTTGTTATATTTTAAGGTTGATGGTAACCACATTGCTGGCAAGAAAGTTT
TGATCTCATCTTCGTATTTCATCAAAGAGAACGAAAACGACAAAAGACAT
GACCAATATCACCTAGAGCCTTTAATTGGGCTTCTAGCTGCATTAAGTGA
TGTCTTTGGTCCTGAAAATACACACTTCATTGAGTTCGATTCTCAATCCA
GAACAAGACCTCCATCTGCAAGTTCTAGAAAGCGTCCACGAAGTAATGGT
GCAAACCAATCTAATTCTCAACCAGGAAATTCTGGAAACGAGACCAGGAT
CTTAATGAGAAAAAACATCGATTTCCATAACAACAGACCTGGTAGCGATT
TTGAAAAGATGTTTGAACAAGCTCAATCATTTGCAAAATCCAAAGCTCAT
CAAATGGTAAAATCTTTGTTTCATTATGCCCCATAAGCTTTTTTTTATAA
ATACATCCAAAGTTTTCGGATTTTATTAACTTTTTGAGTTTTAAGCCTAA
ATATGTTTTTTAACATGTTCTTATTTTCACCATTTTGTGGGTATTTTTGT
CCATTTTCCTAAGAAACTAGAGTCCGAAAAGCCTTAAAATGTTCTTAACT
TGTTCTTTAAAATTTGGCCCTTGTATAGTTTGTTATTATAAAAAAACGTG
TACGTTACTGACTCTTATACCAGGACCAAGGAGAAAGTTAAATCCGCCAT
CTTTAATTGGAGTTTTAAAAAACATAAACATCGGTCCCAGTCCCAATCGA
GTTTCAGTCCGTTATCTTTCCCCCCACTGGCTGGAAAATGTCACCGGGTC
TGCGAGAAAGGGGCGTTTCAAGGTAAAGTGTTTTATCTTGTTTATTTTTT
ATCGTCTATTGATTCTTTTTAACAGGCAATCTTGAAACATGCTAAGAGTC
GACGAACACCACCAGACGAGCCGTTTCAAAATTTCAATAATTTCAACAAA
AAGCAACCCAATACTTTTGGAAGTGATTTGCTGTCACCTATCCTCTATGC
ATCTTCAAATCGAGGGCTTCCTAACCCTACCAATTATGACATCATCATTA
TTATGACTGATCTAACACAGCCAAATAATGAGTATGAAAAAATGATTAAC
CAGTTACACGAATTAAGAAAAGTCCGAGATACAAGAGTTGTTATTATCAA
TTTCGGCAGTAGAGAAGAAATTCAACAG Coding sequence (CDS) from alignment at sc0000019_pilon:648460..652637- >XLOC_041972 ID=XLOC_041972|Name=XLOC_041972|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3660bp|location=Sequence derived from alignment at sc0000019_pilon:648460..652637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAGTGTCTATGGCAACCAATTGAGCAGTGTCTCTTTGCTGACCG
CTTACACCATAATAGAAATAATAATGAAAATGTGGAAAGAACACCAACCA
TACATGACACTATACTTCAAGAAATCCCTATCCTTATTCAAAGAGGTTTT
GCAGAAAATATTATAACATTTGTTTATGACATGAATAAAAAATATGAGAA
ATATCAGCCAATCTTGGAAGTTTTGGCAACAATGGCACTCTATGGAAACG
AAGATGTAACACGAAAGGTCTTAGAAGCTTTACCAAAAATTTGTAATATC
CCAACAAAGCTGATGTACTTTTATGAATTGACTCGAAAATATGATCATAT
CAAAAATGTTTGGGATAACCAACATAATGGATGGGTTCACAAATGCATTT
TGGAATGGGCAGGGCAGTTCGACAATGATGATATTATGACGCTCCTCTAT
TATTTTACAAAGTATAAAAGAAGACATGGACACAGACTTTTGGATATGGA
AGAGTGTCTATGGCAACCAATTGAGCAGTGTCTCTTTGCTGACCGCTTAC
ACCATAATAGAAATAATAATGAAAATGTGGAAAGAACACCAACCATACAT
GACACTATACTTCAAGAAATCCCTATCCTTATTCAAAGAGGTTTTGCAGA
AAATATTATAACATTTGTTTATGACATGAATAAAAAATATGAGAAATATC
AGCCAATCTTGGAAGTTTTGGCAACAATGGCACTCTATGGAAACGAAGAT
GTAACACGAAAGGTCTTAGAAGCTTTACCAAAAATTTGTAATATCCCAAC
AAAGCTGATGTACTTTTATGAATTGACTCGAAAATATGATCATATCAAAA
ATGTTTGGGATAACCAACATAATGGATGGGTTCACAAATGCATTTTGGAA
TGGGCAGGGCAGTTCGACAATGATGATATTATGACGCTCCTCTATTATTT
TACAAAGTATAAAAGAAGACATGGACACAGACTTTTGGATTTATGGAACA
CTTCAAGACCCAACAACTTAGATGATCGTGTGGAGTTTGCCTTTGAACTG
ATAATTCATTATGCAGAGTATGGGTACAATGGAGACAATGGAGTTGCAAA
TGTAGACATATTTCAACAATATTTTACTGGAAATCCGATAGGTATCAACC
AGGATATTTCACGCATCGTTGAATTTATTATATATTTTGAAAGATTGAAG
AGAGCTCAAACGGCTGCAGACTGTATACAGGTGCTTGCTGAGAAATGTGG
GCAAGTGGATCAAATGCCAAGCTGTTATGATGAGGCTAACAGTGATAAAA
AAGAGCATTGTGCATTGGTTTTTGAACATGTCCTACATCGATTTCATAAA
AATCGAGAGTTATGGAACACTTCAAGACCCAACAACTTAGATGATCGTGT
GGAGTTTGCCTTTGAACTGATAATTCATTATGCAGAGTATGGGTACAATG
GAGACAATGGAGTTGCAAATGTAGACATATTTCAACAATATTTTACTGGA
AATCCGATAGGTATCAACCAGGATATTTCACGCATCGTTGAATTTATTAT
ATATTTTGAAAGATTGAAGAGAGCTCAAACGGCTGCAGACTGTATACAGG
TGCTTGCTGAGAAATGTGGGCAAGTGGATCAAATGCCAAGCTGTTATGAT
GAGGCTAACAGTGATAAAAAAGAGCATTGTGCATTGGTTTTTGAACATGT
CCTACATCGATTTCATAAAAATCGAGAGGTTTGGAGAATATTTTTGAAGG
CTGGATTACCAATACATCGTTTAATATGGAACATAAGAAACATTGTTCAA
AATGAAAGCCTTATTGGTGATGAAGAAATTGTTGATTTGGTCTGTCAAAC
ACTTGAGAAAAATCACCAGCATATTTCAGCGCTGACGGTTTGGAGAATAT
TTTTGAAGGCTGGATTACCAATACATCGTTTAATATGGAACATAAGAAAC
ATTGTTCAAAATGAAAGCCTTATTGGTGATGAAGAAATTGTTGATTTGGT
CTGTCAAACACTTGAGAAAAATCACCAGCATATTTCAGCGCTGACGGTTC
TGAAGCCTTACATGGAATGTTTAAAAATTGCACAAGACATTCAGGAAGGA
AATCGCACAAGTTTTCGAAGAATCCTTTCTGCTACCAAGAATTTATACAT
TAGAAGACTGGTTCTGAAGCCTTACATGGAATGTTTAAAAATTGCACAAG
ACATTCAGGAAGGAAATCGCACAAGTTTTCGAAGAATCCTTTCTGCTACC
AAGAATTTATACATTAGAAGACTGGTTGATGGTAACCACATTGCTGGCAA
GAAAGTTTTGATCTCATCTTCGTATTTCATCAAAGAGAACGAAAACGACA
AAAGACATGACCAATATCACCTAGAGCCTTTAATTGGGCTTCTAGCTGCA
TTAAGTGATGTCTTTGGTCCTGAAAATACACACTTCATTGAGTTCGATTC
TCAATCCAGAACAAGACCTCCATCTGCAAGTTCTAGAAAGCGTCCACGAA
GTAATGGTGCAAACCAATCTAATTCTCAACCAGGAAATTCTGGAAACGAG
ACCAGGATCTTAATGAGAAAAAACATCGATTTCCATAACAACAGACCTGG
TAGCGATTTTGAAAAGATGTTTGAACAAGCTCAATCATTTGCAAAATCCA
AAGCTCATCAAATGGTTGATGGTAACCACATTGCTGGCAAGAAAGTTTTG
ATCTCATCTTCGTATTTCATCAAAGAGAACGAAAACGACAAAAGACATGA
CCAATATCACCTAGAGCCTTTAATTGGGCTTCTAGCTGCATTAAGTGATG
TCTTTGGTCCTGAAAATACACACTTCATTGAGTTCGATTCTCAATCCAGA
ACAAGACCTCCATCTGCAAGTTCTAGAAAGCGTCCACGAAGTAATGGTGC
AAACCAATCTAATTCTCAACCAGGAAATTCTGGAAACGAGACCAGGATCT
TAATGAGAAAAAACATCGATTTCCATAACAACAGACCTGGTAGCGATTTT
GAAAAGATGTTTGAACAAGCTCAATCATTTGCAAAATCCAAAGCTCATCA
AATGGCAATCTTGAAACATGCTAAGAGTCGACGAACACCACCAGACGAGC
CGTTTCAAAATTTCAATAATTTCAACAAAAAGCAACCCAATACTTTTGGA
AGTGATTTGCTGTCACCTATCCTCTATGCATCTTCAAATCGAGGGCTTCC
TAACCCTACCAATTATGACATCATCATTATTATGACTGATCTAACACAGC
CAAATAATGAGTATGAAAAAATGATTAACCAGTTACACGAATTAAGAAAA
GTCCGAGATACAAGAGTTGTTATTATCAATTTCGGCAGTAGAGAAGAAAT
TCAACAGGCAATCTTGAAACATGCTAAGAGTCGACGAACACCACCAGACG
AGCCGTTTCAAAATTTCAATAATTTCAACAAAAAGCAACCCAATACTTTT
GGAAGTGATTTGCTGTCACCTATCCTCTATGCATCTTCAAATCGAGGGCT
TCCTAACCCTACCAATTATGACATCATCATTATTATGACTGATCTAACAC
AGCCAAATAATGAGTATGAAAAAATGATTAACCAGTTACACGAATTAAGA
AAAGTCCGAGATACAAGAGTTGTTATTATCAATTTCGGCAGTAGAGAAGA
AATTCAACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:648460..652637 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1528-1830:304 |
| Aaloc | 1138-1527:1163 |
| Aaloc | 1024-1137:1479 |
| Aaloc | 865-1023:2279 |
| Aaloc | 496-864:3120 |
| Aaloc | 1-495:4179 |
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