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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000147_pilon:35602..40987- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041945 ID=XLOC_041945|Name=XLOC_041945|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5386bp|location=Sequence derived from alignment at sc0000147_pilon:35602..40987- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGAGAGAGCTGAAAAAGGAAATTGAATACTTGAAAACAGTCTT
TCCGAAGACTCAACATGTTCTACGGATCTTGTCTGCAAGTACAGATGATC
TGACTTGCTCATTTACCGACAACTCTGGCAAGAAGCACACAATTATATGT
AGCATTACAGTAAGTTATGAAATATTTCAAATAAAACTATTGTTCTCTGT
AAGCACTCTGTATAATAAAGTACTGTGCCGGATACTCCGTGTTCTGAAGA
GGCAAATTATATCAGGAAGAATTATCTATCAACTTGTGCATTAGATCAAA
CAAAAATTGGCTTTTGAATTATAAACTTGTTGTTTGTTTGTTCTCTGATG
TTTTCTTTTTTTATTGTGGTATAATTTGACTTTTGCTAAAAAAGGTTACG
CATTATAATAAAGTGATTCTTCATATACTATTGTTTTAAAACAGTTTGAA
AATCCTCTATCGTCTCCTCTTCCAGGATAGCTATCCCGATTTTCCTCCAA
TATGGTGCTCAGAATCTGAGGCGCCACAACTTGTCGAAATCGTTGAAAAA
ATTAATGCAATCACATCAAGCAATCATTTATTATTTACAATGACTAAAAC
ACTGGCTATTGAACTTTTTACAATGATCAAAGTTGAAGTACCTACAAGTG
TACTAGAAGCTACTTTAGTCTCTGATGAGAAGGTATTTACTTTACCTGGA
TTTCTGGAAATGCTCATCTCCCTTAATTTTGCTCAAAAAAGTGGTGAATC
AGGAAATATCAAAAAGTGTTCATTTTTGTTTTTTTTGCTTATTAGAGGGT
CAAATATCTCAGGCCTCAAACAAAGCTTGATGTTCGATAGTTTGGAGAGA
TTATTGCAGCTTTTTATACTTCAAATAGTATTCAACCTTCTTTTTATTAA
AATAAAATTGTGACATTTCTCCTGACCTTTCCGTCTCTCCCTCCCACCTT
TTAAGATGAAAAATTGTACTGAAAAACTTCCATTTATAAACGGAAAGAAA
ATTTCAGTTTTTTTTCTCTTTACTCAGGGAGTAGATGAAGATTACGAGAT
GGATGAAGTAGACTGTGATGATGAAGAGGAAAATGAAATTGAAGATGAAG
ATGATGACGATGACCCCATTGACCAAGAGTGTTTCGATTTCAGGGAAGAC
CCTGTCAAGTGAGTGTTTTGAAAGTATCTTATCTTCACCTTTCCAAGGCT
GTTTCGTTTCTTTTGAGATTCATTCCTCGTTCTAAAAAGGACATCATAAA
ACGTATCTTCAACCATGTGCTTCACCCAGTATTTTTTCAGCAAAAACTTT
ATCCCCCTTCTCTCGCTGCGCTGCAAGTACAATTTGTTTGGAAACTGTTT
TGTTATTTCTGCTTTGTCAGCATTATTGACTTTCTATATCATTAAAAAGA
ATATCTATTTATTTTTCTTTACTTTAGTGACGAATCAAAGGAGAAAGATG
AAGTTGGGGAAGCCAATTATTCACAACTTCAAAAGTTACGAGGCGTCCAA
AGGGAAGAATATCTATCGGTAAGGGGTCTTAAACTGTTCCTAAAATTTTC
TTATCATATATACACGTTTTCTTTAAGAACGATTTTATAAGAACATAATG
TTCTAAAAATGAAAAAAAAAAACCTGAAACCAAAGAACAAACTAAGAACA
ATTCCTGCCTAAGTTTTTAAATTCCTTTTTATAGTAAATTTGTTAACACG
GTAGTAAGCATATGAAGAACATTTTAAGCCTGAAAAAAAAAAAAAAAAAA
AAAAAAATAAGAACAGCCAAGCTCCAGCCAAAATTAATTGAGGCTTACAA
ATTTGATTTTCTCTCTACCTATCCTTCAAAAACATACATGACATCAATAA
CTGATTCTATATTATATTTTCAGGGCAAAGTAAGCGGCTCAGTACAAGCA
ACAGATCGATTGATGAAAGAATTAAAAAATATTTATAAGTCAGATAGCTT
CAAAAAAAGTAAGTGCTCCAATATTGATGACCAAAGTTCTTTGGACCTAC
CTAGAAAGAAGTCCTTTGAATTAAACTTTTCACCTTATCACGAATATTTA
AAAAGCAATTATAAAAATGGTAGACAGCATTGTATTTTTTTTCAAGATAT
TTCGATTTGAAAGTTAAAGTATTAGACATATTGCAACGTCGGGTGTAGTG
TGGTGCTTTTTCGGGATTATAGATATGGGATTTTAAGATTTTATCATTTT
TGTCTATTTCAGATTTATATACACTGGAGTTAAAAGAAGAAAGTAATTTA
TATGACTGGTTTGTAAAACTGAAAGGGTATGAATTAGTTCTCTTTGTCAT
ACTGAGTGTCCCAGGAAAATGTCTCCATCTTTGAAGCGAATTCTAATCTA
TATTTTTTGCATTTGAAAGAGGAAGAATAAACTTAACTTTTGAGGGGTCA
ACTGTCAAATTGGTCAGTTTTCTGGGACAGCCGATATTAGCTGAACTATT
ACTTGTGAGCCGGAAATGGACCTTTCTTTCGATCTGCCTGTCGGCTTCTA
CACATCACATAATATAATTAAACCAGAACGATGCAGCCTCTTTCAGACAG
ACTTATAAATTCATATGATAATGTGTTTATTCTACAATAACACTTCCGAT
TCAGACTCTAAAGTTTCATGTCAAATGTGAAATTTTTTTCTTTCAGATTC
GACAAAGAAAGCCACTTACATAAGGATTTACTGAAACTTTTCAAATCAGA
CTCCAAAACCGATCACATATGCTTGAACCTAAGTTATACGGTATCCATGA
AATTTTCTGCTTAGTAATGTTCTATCTCGCTCTATAATTTCTGATTATTG
TTAATTATGAAATCATTTTCATTTTCTTCGAGACGCAGGGTGTTTATTAT
ACCCTTAAGCTGATAAGTTTTCGCGTCCACTTTTTTCAGGAATCGAGGAT
CTAAATTTTTTCGCGCCGGCAACATTTTGGGAAAAGTATTAACATGTTTT
GTTGTGAGAATTGGGTAGCTTTTTGTAATTTAGTTTCTTTTGCGCTTTCG
AATATTCTTATGCGCCTTTCTTACGTAATGCGCTGTTATTCATGTTTATT
TTTGTGCTGATATTTGGGAGATATGATGCATATGATGCTTTGAAATTTCA
TGAATTTGGGCTCAGCACGCGCTTTATAAAGACAATGCTTGGTTTTTTCA
AGATTTTTAGCCTGGATATGTTGCAATGTTGTGTTCATGAATAAGAAAAG
TGTTTTACAGAGGATTACGTATAACATTCTTTGGTGAACATAGATGTTGA
TGACCTTCTTTTCCCTCTTAGTCACGTTTTCCAATGGAACCACCGTTTGT
TCGCGTTTGTTATCCAGCAATCACTGGAGGGTAAACAATCTTTTTATACA
GATTAATGAATGGACCTCCAGGCCTAGCCATGAACAATACCTTGCGCGTG
CCAAAATAGCACACCATAAAAAATAAATGTCATAGATTTTGTACATTCTT
TTATATTTTAGGAGTGCTATTTCAGCACTCGCAAACCATTTAAGGTGTGT
GCCAGCGTGTGCGAGTGCAATAGCACGCCATACACGGCCAGGCCTGGACC
TCAAAATTTTACTGTTTGACCCATAAATTCACATTCACTGATTTTGCTTG
AAACTTACGACTATAGTCCATGCGAACTAAATATACCTACTTGTCCCTAC
TTGTCTATGTATCCATCACGTTACTGTAGCTATTATTTGTAACCCTCAAA
TCATGACGTATAGTTTACTTCGTTTGAGTGAATGGCCCGAGATACTCATA
ATTTTATTGAGCATTTAGTACCATACGTTTGTTTGCACCAAGTCAAGGTG
AAACCTTTCAACCCCTTCAAAAGCACTTAATATGAATAATAATTGAAACC
TAATTTCCTTATATTTCAACTTTTCTTGCAGATACGTCTTGAATGGCGGT
GCAATCTGTATGGAACTTCTAACGCCACAAGGGTGGAGCAGTGCGTACAG
TATAGAAGCTCTCATCATGCAAATATCGGCCACCCTTGTGAAAGGAAAAG
CACGAGTCGATTTCTCGAGCACAAACAGGGTAATTATTTTTCGTGCGATT
TCTACAAGGCTTCTTATTTGAAAACTCGTATCGCAAGCCAATGTGTGGAG
GCTCTCAGGATCGACCAGGGAAGCCTATATTCTAATCTAGGTTTTAGTAA
ATTTGGAATTTAAAACAATGGACGTGGCAATATTATAAGTATACATATAA
CCGTCAATCTGGCATTCGTAAATAGGCTCCACGGCTCTCAGTTCTACGAA
GAATCGTTAGTCCAACTTATTCATATCTAAGAGGATGCTGAAACGCTAAA
GAAAACATTCACATTTCTAAGTAACAGTTTTGCGCCACCATCCATTAATC
TATGATCCATCCTAGAAGCAGTTTTTGTTTAGACTTTTTTACTCTTGATT
TTTTCTTTCTTATCTTCAGATAAACACAGTATACTCGCTCAATAAAGCAC
AACAATCATATAAAACCATGGTACAGATACACGAAAAAAGTGGTACGAAT
AACCTCTTTATCAACACTTCAAAAAAAAGCCTATCCAAAAACCACTATAG
CCTTCATTCGGTCCCGATCTTGCCCGGATAATGGGGACTTTTCCTCTTAC
CTCGACAGAAGAGGACTATTTGAGATTTCTAAAATAAATGTTCTACCCTC
TCACTTCTTCTTTGTTTTTCATCTCCATAGATTTCTCTCAAAAAGTATAA
TACTCTTCTCAACGGTTTATAATTTGTTATCTGCCCTTAACAAAGTATTA
TCATCGATGTTGGCATGATTCCCCATAGTTTCACCCCCCTATGTTTAGGG
GGGGGGCTTCAAATTCTCAGACAACCTGTAAGGGTGGGGGGGGTTGAAAA
AGTCTCAATAATTAGCGGGGGTTTGGCCTATAGGGGGTATGGTTATACAG
GGGGATGGTTGTATAGAGGGGCTCCAAAATTTATCATTTTCAGTGTCATT
CTCAGTCAAAAATTTGATCCCAAGGTTCACGACCTCGGTTATTAGGGGGA
GGGGGGGGGTCTGAGAGATTCATATATAGGGGGTTCGGCCTTTAGGGTGG
GGGGTTTAAACCATCCAGGAAGTTATGTTCCCGAATGGTAGCAAAATGAA
AAAGGTGCAAACCTAAAGTGAATGAACGTTTCATTTATTCCTAAGCAATA
TAAATTAGTTCATGGTAAAAACCTAATTCCATGACCAGAAAAGCAAACTT
TTCTTCGCTGACTGAAAAGATAACGCTAGATAAAAAAACCCATGGGTGGG
GTGGTACAGGCTATGACCAGAGAATCATCATCAAATTATTTTAAGTCTGA
GTAAAAAGTTCTAATAGACTTTAAAAATTTATCTTTTGTTATCGAATTTT
CTAGGTTGGTTTACACCGCCAAAAGACGAAGGTTAA Coding sequence (CDS) from alignment at sc0000147_pilon:35602..40987- >XLOC_041945 ID=XLOC_041945|Name=XLOC_041945|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000147_pilon:35602..40987- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGAGAGAGCTGAAAAAGGAAATTGAATACTTGAAAACAGTCTT
TCCGAAGACTCAACATGTTCTACGGATCTTGTCTGCAAGTACAGATGATC
TGACTTGCTCATTTACCGACAACTCTGGCAAGAAGCACACAATTATATGT
AGCATTACAATGTCTCGGAGAGAGCTGAAAAAGGAAATTGAATACTTGAA
AACAGTCTTTCCGAAGACTCAACATGTTCTACGGATCTTGTCTGCAAGTA
CAGATGATCTGACTTGCTCATTTACCGACAACTCTGGCAAGAAGCACACA
ATTATATGTAGCATTACAGATAGCTATCCCGATTTTCCTCCAATATGGTG
CTCAGAATCTGAGGCGCCACAACTTGTCGAAATCGTTGAAAAAATTAATG
CAATCACATCAAGCAATCATTTATTATTTACAATGACTAAAACACTGGCT
ATTGAACTTTTTACAATGATCAAAGTTGAAGTACCTACAAGTGTACTAGA
AGCTACTTTAGTCTCTGATGAGAAGGATAGCTATCCCGATTTTCCTCCAA
TATGGTGCTCAGAATCTGAGGCGCCACAACTTGTCGAAATCGTTGAAAAA
ATTAATGCAATCACATCAAGCAATCATTTATTATTTACAATGACTAAAAC
ACTGGCTATTGAACTTTTTACAATGATCAAAGTTGAAGTACCTACAAGTG
TACTAGAAGCTACTTTAGTCTCTGATGAGAAGGGAGTAGATGAAGATTAC
GAGATGGATGAAGTAGACTGTGATGATGAAGAGGAAAATGAAATTGAAGA
TGAAGATGATGACGATGACCCCATTGACCAAGAGTGTTTCGATTTCAGGG
AAGACCCTGTCAAGGAGTAGATGAAGATTACGAGATGGATGAAGTAGACT
GTGATGATGAAGAGGAAAATGAAATTGAAGATGAAGATGATGACGATGAC
CCCATTGACCAAGAGTGTTTCGATTTCAGGGAAGACCCTGTCAATGACGA
ATCAAAGGAGAAAGATGAAGTTGGGGAAGCCAATTATTCACAACTTCAAA
AGTTACGAGGCGTCCAAAGGGAAGAATATCTATCGTGACGAATCAAAGGA
GAAAGATGAAGTTGGGGAAGCCAATTATTCACAACTTCAAAAGTTACGAG
GCGTCCAAAGGGAAGAATATCTATCGGGCAAAGTAAGCGGCTCAGTACAA
GCAACAGATCGATTGATGAAAGAATTAAAAAATATTTATAAGTCAGATAG
CTTCAAAAAAAGGCAAAGTAAGCGGCTCAGTACAAGCAACAGATCGATTG
ATGAAAGAATTAAAAAATATTTATAAGTCAGATAGCTTCAAAAAAAATTT
ATATACACTGGAGTTAAAAGAAGAAAGTAATTTATATGACTGGTTTGTAA
AACTGAAAGGATTTATATACACTGGAGTTAAAAGAAGAAAGTAATTTATA
TGACTGGTTTGTAAAACTGAAAGGATTCGACAAAGAAAGCCACTTACATA
AGGATTTACTGAAACTTTTCAAATCAGACTCCAAAACCGATCACATATGC
TTGAACCTAAGTTATACGATTCGACAAAGAAAGCCACTTACATAAGGATT
TACTGAAACTTTTCAAATCAGACTCCAAAACCGATCACATATGCTTGAAC
CTAAGTTATACGTCACGTTTTCCAATGGAACCACCGTTTGTTCGCGTTTG
TTATCCAGCAATCACTGGAGGTCACGTTTTCCAATGGAACCACCGTTTGT
TCGCGTTTGTTATCCAGCAATCACTGGAGGATACGTCTTGAATGGCGGTG
CAATCTGTATGGAACTTCTAACGCCACAAGGGTGGAGCAGTGCGTACAGT
ATAGAAGCTCTCATCATGCAAATATCGGCCACCCTTGTGAAAGGAAAAGC
ACGAGTCGATTTCTCGAGCACAAACAGGATACGTCTTGAATGGCGGTGCA
ATCTGTATGGAACTTCTAACGCCACAAGGGTGGAGCAGTGCGTACAGTAT
AGAAGCTCTCATCATGCAAATATCGGCCACCCTTGTGAAAGGAAAAGCAC
GAGTCGATTTCTCGAGCACAAACAGGATAAACACAGTATACTCGCTCAAT
AAAGCACAACAATCATATAAAACCATGGTACAGATACACGAAAAAAGTGA
TAAACACAGTATACTCGCTCAATAAAGCACAACAATCATATAAAACCATG
GTACAGATACACGAAAAAAGTGGTTGGTTTACACCGCCAAAAGACGAAGG
TTAAGTTGGTTTACACCGCCAAAAGACGAAGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000147_pilon | genome | sc0000147_pilon:35602..40987 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1114-1143:31 |
| Aaloc | 1039-1110:968 |
| Aaloc | 892-1038:1505 |
| Aaloc | 832-888:2116 |
| Aaloc | 739-831:2740 |
| Aaloc | 676-735:3173 |
| Aaloc | 589-672:3514 |
| Aaloc | 499-588:3959 |
| Aaloc | 367-495:4360 |
| Aaloc | 160-366:4912 |
| Aaloc | 1-159:5387 |
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