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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000147_pilon:54006..58567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041944 ID=XLOC_041944|Name=XLOC_041944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4562bp|location=Sequence derived from alignment at sc0000147_pilon:54006..58567- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCTTACTGTTTCGATTCGATTCCTGCTGAAGACTGTCAAACATATAA
AGATGTAGGAGCTTGTAATGATTTCTTACCCAGTCTCCTGTGTCGTTCCA
CGTGCGGAAATTGCTTTGAAGGTAAGTGGACCAATCATAGAACTTGGTCT
TGAAGTTGGGTTGCAATAATCGTGCTCGAATAATATAGTCCAGTAGAATT
CCATCAAAAATAGGCTCAACCTAGAGAAAAATTTTTTAGAAGGTTTCTAT
ATACCGTTGGAATAATAATTTCGAATGCGGCGTAGAGTCAATTTTTCGTC
ATAATGAAATTGTCTGTATACGTAAGATATACACACTGGAATCGTCCAAA
AAAGGGTCAAAAATCAATTAAATGTCAAACGTTTTCTTTCATTTTTTATT
TATATCTTGTTGTTTTTGTTTCACGCTTTTTAATTCTTTTAACACACCTA
GAAGCTAGGAGAGTTACAATCATGGTCGAAATATATTGAGATTTTAGTGT
ATTTTAATGTTTTTCAGAATTTAAAGTTCGGGCGAGAATTGCTATTTTAG
CACTTCAACTTCCTTTCACTGAATATCTCGATTTTGGAGGGGTTTAGTGG
CTTCTAGGCTATATTCCAAGGGTTTGGAGCAAATTTGAGCTTTTAAATCC
TAGGATCCTAAGGTCGTAAGTCTTAAGTCTCATGTTAAAACTCAGAGTTA
AAACTCTTCTTTCCAACTGTAGTTTAACGCGCTTAAAAATCATTTGTGGT
GTTTAAAACTTCGCAGGGAAATCCGCTTTGTCTCAAATATTTTGCACATG
ATTGTAGGATAGTTAAGTGCTTCGACGACGCTATGATTTTTGACCATCAA
TGTAGTTCACCAGATTCCTCCATTTCTACTACCCTCTGTAAAGGGCGGAG
GGAAAATTTCGACAGTCGACAGTCTTATTTTAAACCATCACTTCGATTAC
AGGCGATGAGATTTCAAGTTCGTCCACAACCTTACCCCCGTTTACTTTGT
TCCCCGAAACTACCACCACGCCCGGTAAGACGATATAATGATTTTTGAAA
TACATAAGTCAAAATAACGTTATTTTTCCAATCTTACATTTCCTAGTTGT
ATTTATCCTGTATGATTTTTCTGCTTTGTTGCTTCGTATTATTAACAAGA
AAATGTTAACTCCGTTAACCGATGTCAGTATCTTGCTTTTAACGCCTTTA
TTTATCTTTTGTACTTTTACGAAAAAATCTTGGGGAAAGGAGTGGCACCC
TCTCCTACTTTGCAGTAGACAGCTGAGAAAAAGGAAGTTTTCGATCCTCA
ATTATGGTTGCAAACTTACTTACTATTGTACTTTTTTCCAGAACCGTCAA
CAACTCAAACGCCACTCACCACAACACAATCGACAGAAGATGCTGTTGAA
CCTCAAACCACATTACAACCTGAAACCACATTTGGTAAGAGCTCTCTACA
GGGTGTCCATAAGAAATGTAGCATAATTTTCATTCTAAAAAAATCTTTAT
AAATTGTGCCGATTTTTATGACTTATCTCAATCAACAATGGATTATCACT
GATTTGATCTAAAATTCTACAGCTTTTCTATACTTTCTATAGCTTGAATT
CATTGAACTTTATATATCTCTGGACCAAGCTATATCCGCCATCTTTGATC
GGAGTTTTTTTTAAACTGGTACCCTAATGGCGGCACTATAACAATAGCGT
TCAGTTTGAGGTCGTTGTTGTTATTATTATCCATATCAGAAATTCAAACA
ACGTTTTTTTCTAGCGTCAGCCAAGTCTTTTCGCTTCAATGCAATGACTT
TAACAAGTTTTGAATACCCTTGCAAGCGGGCTGCAAATGACCAAAAAGTG
TTTTTTTTCTGACGTTAGTTTAGTCTTTTCGCTTCAATGCAACGACTTCA
ATAAAGTTCCGAGCGGGCTGCAAATGACGTTATCGCCCTATAACCAGGGT
GGTTAATGATATTTCAGCCCTCGGAAGCGCGACGCCTTAGTTTTCTCAGC
GCGGGTATGACTATTTCAGTCATAGAACCTTTCAATACCGCCCGCCGTTC
GAATCTTTAATGGCTTACTTAATGACCGCTATATGGATAAAAATACTCAA
TAGCGGTGATGATGTAGCGCCGTTAGACGTTAATTCTTAGCAATGGCCTT
TTCCCTGGTACCAATTCCAAAAGACTCCGATCAAAGATGGCGTTAACCAA
GCTATATTGGTTCAGGGATGTATACAGGTCAGTGCTTGAATTAGAGGTCC
AATTTAAAAATATCTTACACTGTTAATAACCCGTTAATAACCCGTATCAT
TATTTTTTTCACCTTCTAGAGCCGTTTGTACACAACAGTGATCTTACGAA
AGGTATTTGTATGCAAAGTTTTAGGTTTAACCATTCAAATATTCAAATTT
TGGCTAAACTGCAAGTGACCAACTAATTAATTGAATGTCGTGACATGGCA
ATCTTTTTAAACTTAACCAGTTTTGACGTTTTTTGATAACTATAAAACTG
AATTTTTTGACATGTTCTTTTTCTTAGACTCGTTGATAATTACTAGTACC
TTTCCTCTATTCTCCTCCATTCTAGATACGAGCATCATTTTCCTGGTCGA
TGCTTCCAAATACACAATGAAATATTACAAGAAGCGTGTTCAAAATTATA
TGATGGGTGTATACAAACATTATTCCAACACAATCCCTAAAGTCCATTTC
GGTCTTATCTCATATCACAGTTGGATTTATAAACTCAAAATTTTGAAAGA
TTCACAGCGTACTTTTGAAGAAGCGGTACTTAGGCTAAACGCTGGCGGAG
CCTGGCGTTACATGCATCTTGGACTACGCTCCGCCAAAGCTATGTTTCGA
ACAATGTCTTCACGTAACGAGACACGAATTTTGGTCATCGTTTCCGGGGG
TATTTCGCATCGCTATTTTGGTGAAAGTGGTTTTCATTTGAGTAGACAAC
AAGCAATTATTATGAGACGAGAAGGTGATTTTTTTTCTTTTAAATCTTGA
ATCCATTTAAGGAAAAAATGCTACCACTTTTTTGGCATGCTCGTGAAATT
AAATCCAATGAAAATGAAAATTATGAACCCAAACTTCCCGGTTTTTGCCA
CTGCTAGTAAAAAGCGGGTTGTTTCAGTAGAAGACATTACTTCACGAAAT
CATCAATATATGTTAAATACAATGTCCTAATTTTTCAGGTGTATACATCA
TGACGGTGGCATTAAACAAACGATACACAGATTTCAGAGTACTTCGTGCT
TTAGTTTCACCCACAAAAACAGACCATGTCATTCGTACTCCAAACTCAAC
GACTGCTTATGAAATTTCCATACCTACCATAGCGCGCCTTATCGAATCAG
GTTTGTATCTTTTATAAAAGATTTTAAGTCTATTGCTCGTTCATGGGTCA
AATAAGCTCATTGCATCCTCTAAGCCTCTCTTTACGCAGCCTGTGTCTAA
AACGGTGATCGAAAGAAAATTGAGACTCAAGTTTACGAGGGTGCGATAAT
GCGTATAACAAAATAAAATTTCTTTTAATTCAACCTATCTTCTGCGTAGA
ATAAGGGTTTAGGGGTGTGTTTTATCGATATTTTTGTTTATTGTGTTAAG
TGTAATGTCCCAACAATGTGCCAGGATAGGAATAGCTCATTACCCATAAT
TCATTTCGAATGTGAAACGGACTATACCAAAACTAAAACACGTGGTAGAA
TTCGTGAGCTTGATTCTCATTTCATCCCTCAGTTCGTTATTACAAGCTAT
CATAGTTGAGTATCCGCATAACTCGACCCGCACGGGGAATAAAAATTTGT
TCAAGCTAAGAAGATGAATGTTGAATGAGACATTCGATTTATAGAGGTTC
AAGTCCTAGAGATTCTGCTGTAGATGATATATTGGCGCTACCCCTATGCT
CATTGACCTCTAACTAACGTTTAGACGTTGATACCGTGTTGAACTTTAAA
TATCGATACACAATTCATGACTTATTAATTTCACTTTTAGGACCGAACTG
CGATCTCCAATATGCAGATATAGCTATCTTGGTTGAAACGAAAAAGCAAA
ACTTTCTACGGTTCGAATCAGTCAAGACTTTCTTAAACCAACTCTACAAT
ATTGGCAGTAACCTGAAAATCCGTATGCGATTCTTAAATCTTCCAAAACC
CCGATGGAGCTGTTGTTTTAAGTTATACTCCGAAAACACTTTTCAAAAGC
AGGTCTTCCGTCTTGGCTCAGTATTTGACCAATCAATGCAGCCATACCAA
AGCGTTACGAAACGTGTACAAAAAGCTGTCAATTATGAAATGAACGAAGA
CTTTGGGTCAACTTCTCGATTCAAAGTTCTAATAGTCATTACTGAAGATC
CCATAACGACAGAGGACTTGAGGCAAGTCGATCATGCTTATCGCGAAGAT
AAAACCGTCATCAATATCTCGCAAAATGCTGCTACTAAATTACCGGAGCC
GAGTGGTACGTCGCTAGGCAACAATTTAAACTTTGCACATTTTACATTTG
ATAAAGGAGAGACCATTTTAGCGTACATTAAAGCGTCAGAAGGAAATGTT
CCTTGTATGTAA Coding sequence (CDS) from alignment at sc0000147_pilon:54006..58567- >XLOC_041944 ID=XLOC_041944|Name=XLOC_041944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2904bp|location=Sequence derived from alignment at sc0000147_pilon:54006..58567- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCTTACTGTTTCGATTCGATTCCTGCTGAAGACTGTCAAACATATAA
AGATGTAGGAGCTTGTAATGATTTCTTACCCAGTCTCCTGTGTCGTTCCA
CGTGCGGAAATTGCTTTGAAGGTTCCTTACTGTTTCGATTCGATTCCTGC
TGAAGACTGTCAAACATATAAAGATGTAGGAGCTTGTAATGATTTCTTAC
CCAGTCTCCTGTGTCGTTCCACGTGCGGAAATTGCTTTGAAGGCGATGAG
ATTTCAAGTTCGTCCACAACCTTACCCCCGTTTACTTTGTTCCCCGAAAC
TACCACCACGCCCGGCGATGAGATTTCAAGTTCGTCCACAACCTTACCCC
CGTTTACTTTGTTCCCCGAAACTACCACCACGCCCGAACCGTCAACAACT
CAAACGCCACTCACCACAACACAATCGACAGAAGATGCTGTTGAACCTCA
AACCACATTACAACCTGAAACCACATTTGAACCGTCAACAACTCAAACGC
CACTCACCACAACACAATCGACAGAAGATGCTGTTGAACCTCAAACCACA
TTACAACCTGAAACCACATTTGAGCCGTTTGTACACAACAGTGATCTTAC
GAAAGAGCCGTTTGTACACAACAGTGATCTTACGAAAGATACGAGCATCA
TTTTCCTGGTCGATGCTTCCAAATACACAATGAAATATTACAAGAAGCGT
GTTCAAAATTATATGATGGGTGTATACAAACATTATTCCAACACAATCCC
TAAAGTCCATTTCGGTCTTATCTCATATCACAGTTGGATTTATAAACTCA
AAATTTTGAAAGATTCACAGCGTACTTTTGAAGAAGCGGTACTTAGGCTA
AACGCTGGCGGAGCCTGGCGTTACATGCATCTTGGACTACGCTCCGCCAA
AGCTATGTTTCGAACAATGTCTTCACGTAACGAGACACGAATTTTGGTCA
TCGTTTCCGGGGGTATTTCGCATCGCTATTTTGGTGAAAGTGGTTTTCAT
TTGAGTAGACAACAAGCAATTATTATGAGACGAGAAGATACGAGCATCAT
TTTCCTGGTCGATGCTTCCAAATACACAATGAAATATTACAAGAAGCGTG
TTCAAAATTATATGATGGGTGTATACAAACATTATTCCAACACAATCCCT
AAAGTCCATTTCGGTCTTATCTCATATCACAGTTGGATTTATAAACTCAA
AATTTTGAAAGATTCACAGCGTACTTTTGAAGAAGCGGTACTTAGGCTAA
ACGCTGGCGGAGCCTGGCGTTACATGCATCTTGGACTACGCTCCGCCAAA
GCTATGTTTCGAACAATGTCTTCACGTAACGAGACACGAATTTTGGTCAT
CGTTTCCGGGGGTATTTCGCATCGCTATTTTGGTGAAAGTGGTTTTCATT
TGAGTAGACAACAAGCAATTATTATGAGACGAGAAGGTGTATACATCATG
ACGGTGGCATTAAACAAACGATACACAGATTTCAGAGTACTTCGTGCTTT
AGTTTCACCCACAAAAACAGACCATGTCATTCGTACTCCAAACTCAACGA
CTGCTTATGAAATTTCCATACCTACCATAGCGCGCCTTATCGAATCAGGT
GTATACATCATGACGGTGGCATTAAACAAACGATACACAGATTTCAGAGT
ACTTCGTGCTTTAGTTTCACCCACAAAAACAGACCATGTCATTCGTACTC
CAAACTCAACGACTGCTTATGAAATTTCCATACCTACCATAGCGCGCCTT
ATCGAATCAGGACCGAACTGCGATCTCCAATATGCAGATATAGCTATCTT
GGTTGAAACGAAAAAGCAAAACTTTCTACGGTTCGAATCAGTCAAGACTT
TCTTAAACCAACTCTACAATATTGGCAGTAACCTGAAAATCCGTATGCGA
TTCTTAAATCTTCCAAAACCCCGATGGAGCTGTTGTTTTAAGTTATACTC
CGAAAACACTTTTCAAAAGCAGGTCTTCCGTCTTGGCTCAGTATTTGACC
AATCAATGCAGCCATACCAAAGCGTTACGAAACGTGTACAAAAAGCTGTC
AATTATGAAATGAACGAAGACTTTGGGTCAACTTCTCGATTCAAAGTTCT
AATAGTCATTACTGAAGATCCCATAACGACAGAGGACTTGAGGCAAGTCG
ATCATGCTTATCGCGAAGATAAAACCGTCATCAATATCTCGCAAAATGCT
GCTACTAAATTACCGGAGCCGAGTGGTACGTCGCTAGGCAACAATTTAAA
CTTTGCACATTTTACATTTGATAAAGGAGAGACCATTTTAGCGTACATTA
AAGCGTCAGAAGGAAATGTTCCTTGTATGTAAGACCGAACTGCGATCTCC
AATATGCAGATATAGCTATCTTGGTTGAAACGAAAAAGCAAAACTTTCTA
CGGTTCGAATCAGTCAAGACTTTCTTAAACCAACTCTACAATATTGGCAG
TAACCTGAAAATCCGTATGCGATTCTTAAATCTTCCAAAACCCCGATGGA
GCTGTTGTTTTAAGTTATACTCCGAAAACACTTTTCAAAAGCAGGTCTTC
CGTCTTGGCTCAGTATTTGACCAATCAATGCAGCCATACCAAAGCGTTAC
GAAACGTGTACAAAAAGCTGTCAATTATGAAATGAACGAAGACTTTGGGT
CAACTTCTCGATTCAAAGTTCTAATAGTCATTACTGAAGATCCCATAACG
ACAGAGGACTTGAGGCAAGTCGATCATGCTTATCGCGAAGATAAAACCGT
CATCAATATCTCGCAAAATGCTGCTACTAAATTACCGGAGCCGAGTGGTA
CGTCGCTAGGCAACAATTTAAACTTTGCACATTTTACATTTGATAAAGGA
GAGACCATTTTAGCGTACATTAAAGCGTCAGAAGGAAATGTTCCTTGTAT
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000147_pilon | genome | sc0000147_pilon:54006..58567 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1452:571 |
| Aaloc | 721-879:1373 |
| Aaloc | 322-717:1986 |
| Aaloc | 289-318:2242 |
| Aaloc | 196-285:3220 |
| Aaloc | 124-192:3609 |
| Aaloc | 1-120:4563 |
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