|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:1060028..1065308+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041913 ID=XLOC_041913|Name=XLOC_041913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5281bp|location=Sequence derived from alignment at sc0000053_pilon:1060028..1065308+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCTTTTCCTGCTTTTGATTCTTCCACATGTCGCTGGTAAGTTTCA
CCTTCACGTCATTCATCACTCGTATTCAAGacccattctcacagacccac
tgagagcctttcccactggaaaaattagccaaaacaTCGTCCTTAATGGA
AAATGACACTCTAATTCTTGTccctgctgaaaataatcagataagcaaat
cctcatcgtaaaatattgtgctattttttccatccccactgaattttctg
gcttgaaaGCAATGAAATTCAAATCCAGGCCAGATGTTCTATAAGGAGTT
GAGAGGATTTCTGAATAAACCAAGGAAACGTTTGGGGAGTGACGATCTCA
AAAAGTCTGGGAcccaaattttaatttcatattttcattgattttctttc
taatTTTACAGAGCCATTGCTTTCAAATTACCTGCAAGGAGACTCATCTT
CACGAGCTCTTCCCGTGCAAATGGATATGGCTTCAGGTCAGTATTTTGGC
GTGTaccaaaaaggaaaaataaaaacagaaaaaccaTTGGAAAATTTTAT
CTTTCAGTCATCCAAGAATACCTgcacaattttgatttaaaggttttgct
ttAAAATAAGAGCGATATCATTTGCTTAcccatcaattttaatttacaag
ctttttgatattgaattgacacggatgtggagcaagattggtcagaaaga
agagaaaagaaaaacaatttttttgcttatatcagcacaatatgacaata
ggcagacactgttctgatatgaaatacgtgtctgatatgaaatgggaaca
cttatgtaaaaataaaacctttaactctCTTCTCCAGTAATTGTCATTAA
ATCCTTAACTTCCAAAAGTTTAGACTAAAAACCATGCTCCAAAATAATCC
TTTCCACCTTCAATATTCTAGAGGCTGGTATCACAATCTGCACTGGTCAA
ACGCGAACAATTTCATGTCGTGATGGAGCCAACATGGCAGTCACCAATGC
ATTCTGGGGCAGGATTTCGGACAAAGTGTGTCCGTCCGATGATGGTGACC
CGGTGACGGATTGCATCGGGTCACGTGACACGTTACCATTGGTGAGAAAG
AAATGCGAAGGAAAGAAAGAATGCAAACTGTCCGCTAGACACAGGTAAGA
ATAATCATGCGTTATTTATTGGACAGTTTTCTGGGGAAGCATTTGGTGGc
aaaaattataatataaaGCCTGCAGTGTCAATATAATGGACAGAggatcg
agaaaaaaataccGTTAGATGCTTGAGCCAGGGCTGTTTTCAAGGTACAT
TTCTAACTaaaaaaataatcagttttttttgacaaaataatttgTTTGAC
GTTGAATAAACGTTATTCTGTGACGTGTACTTATGAGCCGTCTGTAAGTg
atctggaaaaaatggacGTGTAAACGCGTCAACAGAGTAAAGGCGCTATC
AAGTTGAGTCCTTGGTTTAAACCATCGATGTTTAATCCCTTGGGCTTTAT
GGTTTGGAGTTTGTTGATCCAATTGTTCTCTCGCGTATCAATAATAGACG
CAAATAATTCCCCATCTATGGTTAGAATTTAAATAAAACCCACCAAAAAG
TCAATCTATTACCCAGAGCCATTTAATTCTGTTTATGGAAGTGATACAGT
CGAGAGTGCTATATCACACTATAAAGAAGCTAGCTTAGGGACTGGTTTCG
AGTTTGCAAAAACGCATCTTTGAATAAAGCTGATGTAGCAAAGAATTTAG
TGAGATGCATATCTCAAGATACTTTGTCACATACTTGTGTAGTTTTAGAA
TGTGGCTGACATCTAcccagtagcgtagccaagaggggcgcaaaaatTGT
TTATGAGAGCAGGTTTTTATGCtattataattatcttttaaaaccatgaa
taaataattacagtgtcataagaatctgctctcctacacaaattttgcgc
ccctcttggctacgttACTGTCTGCCTGATTCAACTTGACTACTCATACC
tttttttCATTGGGTTTAgggccccgaaggggctagagatgaatattcaa
cctttctcaaacaataaaaagtgaagccttaagttcGCCCcgcattttaa
aaattttgtttgaaaaacacactagactagtctaagacgagtttcatcta
agaggaacaaacgtgaagacgggagtTTTTCGGGGGTAGCCGTTGTAGAC
TCTATTTTCcgccgcgcaacatattacgttttataatatacaaactgtGT
TATATCATGATAATatacggacgataacatcgtctaaaaACACACACGCG
TGTTCTGAATGGGAAAAATAATTGGCTTCTTTTCCCAGCCGGGAGTTTCG
AATCTAGCCCCTTTGGAGCTTTTAAAATCAATGCTTTTTCTTTTCCAGAG
AATTACAAAACCAGGGATCGAGCCATTGCGCAGGCGTACAAAAATACTTG
GTTGTGAACTACACGTGCGAACCAGAATCTCAAGGAGTGACTTTGTGTGA
TTCCGTCGAAACCGACCTCTTCTGCAGAGCAGGATGGAATATGGAGTTGG
CTGATGTCTTCTGGGGTAGAAGGTAAGAGGAATAGCCTTAGTATTCGGTG
ATTTCGTTAATTATAatgtacatgtttttctttttataagcataacgctt
ttaagcatatgaaggctcagatttgctgattttttaagcAATACATCAAG
TACATCAATACATTCaagtcatcaatttttttctgatcaAAAAGGTTTAA
AAGTGGTCTTAAACAAAAAGACGTTCCAGGGAtagccacattccactgct
cccaaaaccTGGACGCTGTTTGAAtcaaaatgtttacaaaatttctaagG
TTTTGCAAAATTTGGGTCGGGGTGAATTATAAACATTATAATGAATTATA
AACATTGtaattcataagcatataataagcaaaCGCTTTGTctaaattct
ttgaaaacttaagcataCATGAGCCTAACCAAGGGGCAGAtacttgctta
ttaaaaaaatatgtatgcATCTACAACGGTAATCAAGAGAATCTGTTTCC
ATATGGTTAAACATCGAATACCAATTTATGCAAGGTGCTACCCCCATTCT
CCTTGGTATAATATGAGTATCATTGGTTGGCTTTTATTGATCAGTGTCAT
TTGACCCAAGTGCGGTAACTGAGAATAGAGTAAAAACGTTCCTCATTTTT
ACACCCAACGAGTGTGAAACTATCAGTGAAACCACTTAGGCTTGGTTGTA
AATCCTTAATTACGAATCTTTTTTATCCTGATATAAACCTTAAATTCTTC
TTCACTTTAGAGCGAGCGCCAAGATGTGTGGCGGGGATGGTGAGATCGAA
TGCGACGCCTCTGAGTCCGCCTCCACTTTCCTCAAGAACAAATGTAACGG
ACAAAACAGATGTCATATCAAGGCTGATGCGGACTCACTGGATCCCAAAA
CTCATTCTTCATGTAACGGcatcttgaaatatttaatGGTGAATTATGTG
TGCAAACCACAAGAACAAACTAATGATGAAAGTAAGTGTTTTACCAGAAA
ACTACTcgcaccactttttgatttcactgatataatcaaaatatattatg
gtcaaaatctattgagaatttatctttttttctcgtctttcaaaatttgg
agttcgggtgagaaagtcgatttcgggccatctctcaaatttaatcggat
atttcaatttggctcgggtttatagacccccaggctatattctgagtcct
ACTGGACAATTCTTAagaacttttgaatcctcagataCTAAGGTCGTCTT
AAGTTTATCGtgaaaactcagagttaaaactctacccttccaacctaact
tccaaatcgtttgtggttttgaattttccttttttctaaaatattatgac
catgattgtaggtgTTACTACAGTCCTTTTGTGAGAGCTATAAGAATCAT
AAAAAGCGAGCTAAGGAACTGGGGCGAGTTTGTTTCAACCTTATGATGAA
ATCATCCCTTTAAAACCAAATGTCAGTTGTTAACAAATATATAGTCTTCA
TAATAACTCAGGAACAAACTTGTATTCCCTACTGTGCGTATTAAGCTATG
CATTTTACTGTGTCTTCATCGAAAGCTTTCCCCAAAATAAAGTCTTGCTG
TCTCCAGTTTCATAGCCTTCACAAGGGGGGCAGCAGTTTTCTCCTGTCTT
GTTtggaattttcgagttatttgtcAACACAGTACAGTTATTTAGATACC
TGGTGAAATTGCAATTCATGCCAATTTTCTAGAAGATGAAGCGGTCGAAT
TCGTTAAGTCTGACTAGACGAGTTTACTTTGCACTTTCCTCTTCTCTTTT
TGGAACTGAGGTGGCGCTCTAAGGCCGAATACCCCGAAATGTCGCTTCAA
ATGTGAAGAAGGAAGGTGgaattctcattttttctttcaactgTCAAGCT
TATTGCATAAGGTTCTCTGCTGGTTTTTTATGCCAATTAAGGAAATTAGA
AGACGACTGGATGTATGTATGGAAATTAGGTTCACAAAATAGATCGTGCA
GTGGCTTTTAGTGCACAATCGGCCCTGGTAGTGAGTTTTTGAAAGATTAT
TCGTCCTATAAATGCCTCATATGGTAATAATGGTCGAAAATGGTCTCTTT
ACAcccttttcattttctcttcacAGCAGAGAGCGAAGAAGAGATGAAAG
ACGAGACGTCCAAAGAATTGATGGTGATGTtaaacaaacagaaaaatgcT
GCTGCCAAGTCTTCaaccaaaaaaatctctaagaAAGAAGAAGTAGCTGA
GGAGCCTACTCAACAACATTCTCTCATTATCAACGAAGATTCGCTCTCCT
CCTCACCACACGCTAAAACCGTCACAGGAGAAGCGCGCACACAAATCGCT
GAGTCAGCAAACACGTCACAAAAGGAGGATAAAGTCGAGGTTTCAGAGCC
AAACACAGTTCGCTCAATCCTCGATCGCGCTAAAgaagttttaaaaacat
tagATTATGATGGAAGTAGTTCCAGTGAGATTTCAAAACGTGGCGGTATC
ATGAGGAGCGCCCCTGCGCCCTCCAGCCGCCAATTTGTTAATGATACAGC
AAAGGCGGTAAAACAAGTGGCCGCCCTCGCTCAAACCTTGGTCAAACACG
CTGAAGCAAAAGcattattgaaaaacaaaaacaaaagccaGTTGACCACG
AAGAAAGATAACACAAAAATGACACCGACAAAGAGAGGGTTCATAGCGCC
TGAACCTGGACAATTCGGAAACACACCTTAA Coding sequence (CDS) from alignment at sc0000053_pilon:1060028..1065308+ >XLOC_041913 ID=XLOC_041913|Name=XLOC_041913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2676bp|location=Sequence derived from alignment at sc0000053_pilon:1060028..1065308+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCTTTTCCTGCTTTTGATTCTTCCACATGTCGCTGATGTTGCTTT
TCCTGCTTTTGATTCTTCCACATGTCGCTGAGCCATTGCTTTCAAATTAC
CTGCAAGGAGACTCATCTTCACGAGCTCTTCCCGTGCAAATGGATATGGC
TTCAGAGCCATTGCTTTCAAATTACCTGCAAGGAGACTCATCTTCACGAG
CTCTTCCCGTGCAAATGGATATGGCTTCAGAGGCTGGTATCACAATCTGC
ACTGGTCAAACGCGAACAATTTCATGTCGTGATGGAGCCAACATGGCAGT
CACCAATGCATTCTGGGGCAGGATTTCGGACAAAGTGTGTCCGTCCGATG
ATGGTGACCCGGTGACGGATTGCATCGGGTCACGTGACACGTTACCATTG
GTGAGAAAGAAATGCGAAGGAAAGAAAGAATGCAAACTGTCCGCTAGACA
CAGAGGCTGGTATCACAATCTGCACTGGTCAAACGCGAACAATTTCATGT
CGTGATGGAGCCAACATGGCAGTCACCAATGCATTCTGGGGCAGGATTTC
GGACAAAGTGTGTCCGTCCGATGATGGTGACCCGGTGACGGATTGCATCG
GGTCACGTGACACGTTACCATTGGTGAGAAAGAAATGCGAAGGAAAGAAA
GAATGCAAACTGTCCGCTAGACACAGAGAATTACAAAACCAGGGATCGAG
CCATTGCGCAGGCGTACAAAAATACTTGGTTGTGAACTACACGTGCGAAC
CAGAATCTCAAGGAGTGACTTTGTGTGATTCCGTCGAAACCGACCTCTTC
TGCAGAGCAGGATGGAATATGGAGTTGGCTGATGTCTTCTGGGGTAGAAG
AGAATTACAAAACCAGGGATCGAGCCATTGCGCAGGCGTACAAAAATACT
TGGTTGTGAACTACACGTGCGAACCAGAATCTCAAGGAGTGACTTTGTGT
GATTCCGTCGAAACCGACCTCTTCTGCAGAGCAGGATGGAATATGGAGTT
GGCTGATGTCTTCTGGGGTAGAAGAGCGAGCGCCAAGATGTGTGGCGGGG
ATGGTGAGATCGAATGCGACGCCTCTGAGTCCGCCTCCACTTTCCTCAAG
AACAAATGTAACGGACAAAACAGATGTCATATCAAGGCTGATGCGGACTC
ACTGGATCCCAAAACTCATTCTTCATGTAACGGcatcttgaaatatttaa
tGGTGAATTATGTGTGCAAACCACAAGAACAAACTAATGATGAAAAGCGA
GCGCCAAGATGTGTGGCGGGGATGGTGAGATCGAATGCGACGCCTCTGAG
TCCGCCTCCACTTTCCTCAAGAACAAATGTAACGGACAAAACAGATGTCA
TATCAAGGCTGATGCGGACTCACTGGATCCCAAAACTCATTCTTCATGTA
ACGGcatcttgaaatatttaatGGTGAATTATGTGTGCAAACCACAAGAA
CAAACTAATGATGAAACAGAGAGCGAAGAAGAGATGAAAGACGAGACGTC
CAAAGAATTGATGGTGATGTtaaacaaacagaaaaatgcTGCTGCCAAGT
CTTCaaccaaaaaaatctctaagaAAGAAGAAGTAGCTGAGGAGCCTACT
CAACAACATTCTCTCATTATCAACGAAGATTCGCTCTCCTCCTCACCACA
CGCTAAAACCGTCACAGGAGAAGCGCGCACACAAATCGCTGAGTCAGCAA
ACACGTCACAAAAGGAGGATAAAGTCGAGGTTTCAGAGCCAAACACAGTT
CGCTCAATCCTCGATCGCGCTAAAgaagttttaaaaacattagATTATGA
TGGAAGTAGTTCCAGTGAGATTTCAAAACGTGGCGGTATCATGAGGAGCG
CCCCTGCGCCCTCCAGCCGCCAATTTGTTAATGATACAGCAAAGGCGGTA
AAACAAGTGGCCGCCCTCGCTCAAACCTTGGTCAAACACGCTGAAGCAAA
AGcattattgaaaaacaaaaacaaaagccaGTTGACCACGAAGAAAGATA
ACACAAAAATGACACCGACAAAGAGAGGGTTCATAGCGCCTGAACCTGGA
CAATTCGGAAACACACCTTAACAGAGAGCGAAGAAGAGATGAAAGACGAG
ACGTCCAAAGAATTGATGGTGATGTtaaacaaacagaaaaatgcTGCTGC
CAAGTCTTCaaccaaaaaaatctctaagaAAGAAGAAGTAGCTGAGGAGC
CTACTCAACAACATTCTCTCATTATCAACGAAGATTCGCTCTCCTCCTCA
CCACACGCTAAAACCGTCACAGGAGAAGCGCGCACACAAATCGCTGAGTC
AGCAAACACGTCACAAAAGGAGGATAAAGTCGAGGTTTCAGAGCCAAACA
CAGTTCGCTCAATCCTCGATCGCGCTAAAgaagttttaaaaacattagAT
TATGATGGAAGTAGTTCCAGTGAGATTTCAAAACGTGGCGGTATCATGAG
GAGCGCCCCTGCGCCCTCCAGCCGCCAATTTGTTAATGATACAGCAAAGG
CGGTAAAACAAGTGGCCGCCCTCGCTCAAACCTTGGTCAAACACGCTGAA
GCAAAAGcattattgaaaaacaaaaacaaaagccaGTTGACCACGAAGAA
AGATAACACAAAAATGACACCGACAAAGAGAGGGTTCATAGCGCCTGAAC
CTGGACAATTCGGAAACACACCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:1060028..1065308 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-1338:4679 |
| Aaloc | 514-732:3312 |
| Aaloc | 340-510:2400 |
| Aaloc | 118-336:924 |
| Aaloc | 43-114:414 |
| Aaloc | 1-39:1 |
|
