XLOC_041874.3 (mRNA) -

Overview
NameXLOC_041874.3
Unique NameXLOC_041874.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000089_pilon:1045196..1045883+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041874.3 ID=XLOC_041874.3|Name=XLOC_041874.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=688bp|location=Sequence derived from alignment at sc0000089_pilon:1045196..1045883+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCATCTCAGGTTTTGGTGGGTCGTCTAAAGGCTCGAAGGAGTATGACAT GACTGCTTTAAATTTAAAGAGTCGTTTTGGTGGTGGTTCTTTTCCTCTCT CTGCTTTAGTTGTTCCGACGATAACATCTTCTCCCTTAAATCCTTCTGTA GAATTTCAACATCATGAACATTTAGCTTCTCTCGATCTTGCAGATGACTT TACTACACCACAAGAGGAGATTTGTGTGTTGATAGGGGTTGATCAGTACC ATCGCTTTGTTAGTGGAGAAACCGTACGTCGTTCTTCTGGACCCGTTGCA ACTAAATCTGTGTTTGGATGGTTAGTTAGTGGTCCAATAGAGGGTACATC CTCCTCCTTCTCTAACTCCCTTCTTCTCTCTTCCCAAACTCCTTCTATTG ACGAACGTCTTTCTCGCTTCTGGGACCTTGAATCAATGGGTATTGTTGAT GAGTCGATTGAAGATGAGGTAATGACGAAAGAATTCAAAGACTCCATTGT CCATAACGGAGAGAGATACGAGGTTCCTCTTCCACGAAAGGATGTACATC CTGATCTCCAGGATAACTTTTCTGTTGCCAAACAACGTCTTTTTGGACTG AAGAAGAAATTCAATCATAACCCTGACCTCAAAGCACAATAcaaccaata ttttgaagaTCAGCTTGAACAAAATATCATCGAAAAAG

Coding sequence (CDS) from alignment at sc0000089_pilon:1045196..1045883+

>XLOC_041874.3 ID=XLOC_041874.3|Name=XLOC_041874.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1376bp|location=Sequence derived from alignment at sc0000089_pilon:1045196..1045883+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCATCTCAGGTTTTGGTGGGTCGTCTAAAGGCTCGAAGGAGTATGACAT
GACTGCTTTAAATTTAAAGAGTCGTTTTGGTGGTGGTTCTTTTCCTCTCT
CTGCTTTAGTTGTTCCGACGATAACATCTTCTCCCTTAAATCCTTCTGTA
GAATTTCAACATCATGAACATTTAGCTTCTCTCGATCTTGCAGATGACTT
TACTACACCACAAGAGGAGATTTGTGTGTTGATAGGGGTTGATCAGTACC
ATCGCTTTGTTAGTGGAGAAACCGTACGTCGTTCTTCTGGACCCGTTGCA
ACTAAATCTGTGTTTGGATGGTTAGTTAGTGGTCCAATAGAGGGTACATC
CTCCTCCTTCTCTAACTCCCTTCTTCTCTCTTCCCAAACTCCTTCTATTG
ACGAACGTCTTTCTCGCTTCTGGGACCTTGAATCAATGGGTATTGTTGAT
GAGTCGATTGAAGATGAGGTAATGACGAAAGAATTCAAAGACTCCATTGT
CCATAACGGAGAGAGATACGAGGTTCCTCTTCCACGAAAGGATGTACATC
CTGATCTCCAGGATAACTTTTCTGTTGCCAAACAACGTCTTTTTGGACTG
AAGAAGAAATTCAATCATAACCCTGACCTCAAAGCACAATAcaaccaata
ttttgaagaTCAGCTTGAACAAAATATCATCGAAAAAGGTCATCTCAGGT
TTTGGTGGGTCGTCTAAAGGCTCGAAGGAGTATGACATGACTGCTTTAAA
TTTAAAGAGTCGTTTTGGTGGTGGTTCTTTTCCTCTCTCTGCTTTAGTTG
TTCCGACGATAACATCTTCTCCCTTAAATCCTTCTGTAGAATTTCAACAT
CATGAACATTTAGCTTCTCTCGATCTTGCAGATGACTTTACTACACCACA
AGAGGAGATTTGTGTGTTGATAGGGGTTGATCAGTACCATCGCTTTGTTA
GTGGAGAAACCGTACGTCGTTCTTCTGGACCCGTTGCAACTAAATCTGTG
TTTGGATGGTTAGTTAGTGGTCCAATAGAGGGTACATCCTCCTCCTTCTC
TAACTCCCTTCTTCTCTCTTCCCAAACTCCTTCTATTGACGAACGTCTTT
CTCGCTTCTGGGACCTTGAATCAATGGGTATTGTTGATGAGTCGATTGAA
GATGAGGTAATGACGAAAGAATTCAAAGACTCCATTGTCCATAACGGAGA
GAGATACGAGGTTCCTCTTCCACGAAAGGATGTACATCCTGATCTCCAGG
ATAACTTTTCTGTTGCCAAACAACGTCTTTTTGGACTGAAGAAGAAATTC
AATCATAACCCTGACCTCAAAGCACAATAcaaccaatattttgaagaTCA
GCTTGAACAAAATATCATCGAAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041874.3XLOC_041874.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:1045196..1045883 +
Properties
Property NameValue
Aaloc1174-1239:623
Aaloc1015-1173:463
Aaloc556-1014:1