|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:502492..506273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041859 ID=XLOC_041859|Name=XLOC_041859|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3782bp|location=Sequence derived from alignment at sc0000251_pilon:502492..506273- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTCTTCACGTGGGAGTGATGTTACTCCTACTTGTGGCTTTGAT
CGATTGTCGGGCTATCAAAAAAGGTATACTTTTATTCAATGTTTTTTACC
TAGCTAAGGAATCTTCCTGAATTTTCAATGCAATGAAAGTAGAAAGAGCA
TCCCTTCTCGGTTACCTTTTCATGTTGTAATGATCCTTCTTTGTTATGTT
TTTCGCTAAATTCGTCTTCACTGTCGATGCATAAAATTTCATTTACCTTA
TGGGGAGGAAAATAGTCATGATTTATCTATTTATTTCGGTCTCGATTATT
TGGCCCCGATTCTTTGGCGCCTTTTCATAAATTATCTTGAGTGCAACGAC
TGCCTCGTTTTGAAACCATTGTCAAGGTGACTAAATTCCTTGGGTCTTCG
AGTGCTACTTTCTATAAGTAGAGTAAACTTCTTATGAACTCCTCTGGGAA
TCAATTACCACAGTAATATTTTGAAAACGAGGAGTTGCTAGTGACGTAAT
TTATGGAAAGGTTTTATAAAAGTAAATATTTTCTGTGTTTGCATGATTTT
AAGACAAATTCTACAGCTTGATTTTGTTTTGGCTAGGTGTTATTTTCTTC
TCTCCTAATACTGTATATGATTATATGTACGGCCTTGCCCCCCATTCTTT
GCTTACAATATATGCACGACCTAATCATCCAAGTTAAAACTGCAATGCAT
GAGACAGTATCAAATTAAAATAGTCTAGAGTAATCTTAGACCAATTCTAG
TCAGGCGTGATGTGTGAACTTAAGGGATTTTTCGAAATAAAGAATAAAGC
AATTTCGGAACAAATTTTGAAAAAAAACTTTTTTGAAATTTTTGAATAAT
TCCCTTTACTTTTTTAGGGAAAGATCACAAAAAGTCTTCAAAGTTATCAC
ATCATGCTCGTAAATTTGCTACCGAAGCCTCGAAAAGTATTTATCAGCAT
GCGCTAGACGAAACTAAAAAAGACTTGGGAGAGGCGATAGATAGTGCAGT
TCAAGCATATACTGAACAGACTATTGGAGGTAGGATACATACAAGGCTAA
CAAAGTGAACTTCGCCATATTTTAGAATACCTGCGACTCACAACCCCAAC
CCCCCGGTCACGAGTCCCTGATGTAACTCACTGGAAATAACTGGAACCTT
TTCCCAATTATTACAATAGATAACATCCTGTTCAAAGAATGAATGTTCTA
TCCCATTTCATAATGTGCTTCTCATTGTAAATCCACTCTCCATACATTTA
ACGAGATGTACATACCCCTAGACTCGTCATTTTTGAGCATTTTCACAAAG
ACAATTTTTACATAGAGATGACCTAGAATAGATTTGCATGTCTTACAACA
ACAACAACACATCTACTGTAGAAAAATGCCAAAAATAACTTGTATCGCGC
ATGTATCGTCATTTAACCAAACGCATTATAAACAGGATTTAGCTGAACAA
TCTAAAAAAGCAAACACTTTCTTACACCATCAACTCCATTATTCGACCAA
ACTTCTTCATTTTTCAAAGGTCATAAAGGCAAAAAGAAAGAAGTCACGCC
AGATACATCTTCAGAGGACCAAAGTAAACGACATGTCCAAAGTTATAATG
ATCCTTTAGCTGAGCAAAACCCTGATGAAGATGAAGCTCATCCAATGCCA
CAACCAGGCCATGTTCCACAAAACTTAAATGGGATTATCCAAAAATATAA
ACCAAAGAAAGTTCAAGATGATAAGAAAAACAAAAACAAAAACAAACAAG
ACAATAAGCAGTCATATGCTGCAGGAACTTGTAAGTTAATAAAATTCCTT
TCCTTCAGCAGTGTAACCCTTTCATAAATTTAAGTTTGGTTAAACCCTTC
TTAAACTAATTTTTCAAGATTGTGCTTTTCTCAGATGCTTTTTTATACTT
TTAGATAGTTCTGTTAGTTTTAAACTTCGTAGATTAAAGTGTTACGATTG
ATGAAATTGAGATTCAGTGTAGTTTTGACATCTTTCATTCCCTTTAGCCG
ATTCAGAAAATTCAGAGGAAGCACCTGATGAAGCTGAGGCACCACCACCA
GGAGGTGCCCCACCCGCAGGTGGTAACCCACCACCTCCAGGAGGTGCTCA
GCCACCTCCTGCTGGAGGGCAGCCCACAACTACTCCAGCACCACCTCCTG
CTGGTGATGATGATGACAGTGATGATAGCGATGATGATGCTCAGCCACCT
GAACAAAAACCAGCCCCAGGAGGCGGCTCTCCTCCTCCTCCAGGTGGTGC
TCCTCCACCACCAGGAGGTGCCCCACCCCCTCCAGGCGGTGCCCCTCCAC
CACCAGGTGGTGTCCCACCCCCTCCAGGTGGTGCTCCCCCACCACCAGCA
GGAAAGAAACCACCAACAGAAGCCAAATCTGACGGAGATGATCAAGAAGA
TTTGAAAGCCTTACTAGATGAAAGTATTGGTAAGATGTCCAGCCATTCAC
AACGAATTCTAAAATAAAGACTGGAATGGAAAAGGAAACGATCTAGAACG
TTGAAGATCCGAAAAACCGGATTTTCTTCAAGGTTGAAGAGATTCTTTCA
GATGTCAAATAATGGCTGCTGCAGATATGGAAATTTGGAAACCTCGTTAA
AAAATCAGATTCCCAATTCCAGTCTTAATTTTGGAGTTCGTTGATCAAAT
CAGTTAAATCTAAAAGTTATTCAAAAATAAAATCTCGATGCATCAAAAGC
TAATAGATTCTAATTAGTCACTTTTGAGTATCACTTCAATATTCAAATAG
GTCAAAAACCTCCTTTTCTTTCTTTTCATCTATTTAGGAAACTTAGTCAA
AGCAAATCAAGCTGTAGAAACACTCTTATCTGCCAGCAGTGGAGGTAAGA
GCTTTTTACCGTTTTCTTCTCCTGCCAATACTGCACCCACTAAACCAGGA
ATTTCCTCATCTTATCTTTGTAATTATTTTTACTTTTAGGATCATCTAGT
GGACCCTCTCCATCTGGAGGTGCTCCCCCACCCGGTGGTGCTCCTCCTCC
AGGCGGTGCCCCTCCTCCTCCAGGCGGTTCCCCTCCACCCCCAGGCGGTG
CTCCTCCTCCAGGCGGTGCTCCTCCTCCAGGCGGTGCCCCTCCTCCTCCA
GGCGGTTCCCCTCCACCCCCAGGCGGTGCTCCTCCTCCAGGCGGCGCTCC
TCCTCCAGGCGGCGCTCCTCCTCCAGGCGGTGCTCCTCCTCCAGGCGGCG
CTCCTCCTCCAGGCGGCGCTCCTCCACCAGGTGGTGCTCCTCCTCCAGGC
GGTGCTCCTCCACCACCAGGTGGCGCCCCTCCCACTGAGGCTAAACCAGA
TGAGGCTGCTGGTGCTCCTCCCCCTCCTGGTGGTGCCGGTGGCGCTCCTG
GAGCAGCAGGTGGCAAAGGTGGAGACTGCACTGGTTGCGAAAACCCATAC
TGCTGTGCCGAACCCTTTGGAGCTACCTCAACTGTTATTCATTTCCCAGC
ACCACCATGTGCCTGTGCTCCCCCACCACCACCTTGTATGGCAATGCCAT
GTCCACCACCCCCTCCTCCATGTGCTTGTGCACCACCACCTCCTCCCCCC
CACCTCCACCACCGCCGCCGCCGCCACCGCCACCACCTCCACCTCCACCT
CCTCCACCACCTCCACCACCACCACCCCCTCCTCCTCCTCCTCCTCCTCC
ACCACCACCACCATGCCCAGTACCATGTCCTGCACCTTGTCCAGTAGCAT
GTGCACCTCCACCACCACCACCTTGTGCACCAGCCTGTATGCCCCCAGCT
TGTGGACCAACCTGCAGTCGCGATTGTTGTGA Coding sequence (CDS) from alignment at sc0000251_pilon:502492..506273- >XLOC_041859 ID=XLOC_041859|Name=XLOC_041859|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000251_pilon:502492..506273- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTCTTCACGTGGGAGTGATGTTACTCCTACTTGTGGCTTTGAT
CGATTGTCGGGCTATCAAAAAAGATGAAAGCTCTTCACGTGGGAGTGATG
TTACTCCTACTTGTGGCTTTGATCGATTGTCGGGCTATCAAAAAAGGGAA
AGATCACAAAAAGTCTTCAAAGTTATCACATCATGCTCGTAAATTTGCTA
CCGAAGCCTCGAAAAGTATTTATCAGCATGCGCTAGACGAAACTAAAAAA
GACTTGGGAGAGGCGATAGATAGTGCAGTTCAAGCATATACTGAACAGAC
TATTGGAGGGAAAGATCACAAAAAGTCTTCAAAGTTATCACATCATGCTC
GTAAATTTGCTACCGAAGCCTCGAAAAGTATTTATCAGCATGCGCTAGAC
GAAACTAAAAAAGACTTGGGAGAGGCGATAGATAGTGCAGTTCAAGCATA
TACTGAACAGACTATTGGAGGTCATAAAGGCAAAAAGAAAGAAGTCACGC
CAGATACATCTTCAGAGGACCAAAGTAAACGACATGTCCAAAGTTATAAT
GATCCTTTAGCTGAGCAAAACCCTGATGAAGATGAAGCTCATCCAATGCC
ACAACCAGGCCATGTTCCACAAAACTTAAATGGGATTATCCAAAAATATA
AACCAAAGAAAGTTCAAGATGATAAGAAAAACAAAAACAAAAACAAACAA
GACAATAAGCAGTCATATGCTGCAGGAACTTGTCATAAAGGCAAAAAGAA
AGAAGTCACGCCAGATACATCTTCAGAGGACCAAAGTAAACGACATGTCC
AAAGTTATAATGATCCTTTAGCTGAGCAAAACCCTGATGAAGATGAAGCT
CATCCAATGCCACAACCAGGCCATGTTCCACAAAACTTAAATGGGATTAT
CCAAAAATATAAACCAAAGAAAGTTCAAGATGATAAGAAAAACAAAAACA
AAAACAAACAAGACAATAAGCAGTCATATGCTGCAGGAACTTCCGATTCA
GAAAATTCAGAGGAAGCACCTGATGAAGCTGAGGCACCACCACCAGGAGG
TGCCCCACCCGCAGGTGGTAACCCACCACCTCCAGGAGGTGCTCAGCCAC
CTCCTGCTGGAGGGCAGCCCACAACTACTCCAGCACCACCTCCTGCTGGT
GATGATGATGACAGTGATGATAGCGATGATGATGCTCAGCCACCTGAACA
AAAACCAGCCCCAGGAGGCGGCTCTCCTCCTCCTCCAGGTGGTGCTCCTC
CACCACCAGGAGGTGCCCCACCCCCTCCAGGCGGTGCCCCTCCACCACCA
GGTGGTGTCCCACCCCCTCCAGGTGGTGCTCCCCCACCACCAGCAGGAAA
GAAACCACCAACAGAAGCCAAATCTGACGGAGATGATCAAGAAGATTTGA
AAGCCTTACTAGATGAAAGTATTGCCGATTCAGAAAATTCAGAGGAAGCA
CCTGATGAAGCTGAGGCACCACCACCAGGAGGTGCCCCACCCGCAGGTGG
TAACCCACCACCTCCAGGAGGTGCTCAGCCACCTCCTGCTGGAGGGCAGC
CCACAACTACTCCAGCACCACCTCCTGCTGGTGATGATGATGACAGTGAT
GATAGCGATGATGATGCTCAGCCACCTGAACAAAAACCAGCCCCAGGAGG
CGGCTCTCCTCCTCCTCCAGGTGGTGCTCCTCCACCACCAGGAGGTGCCC
CACCCCCTCCAGGCGGTGCCCCTCCACCACCAGGTGGTGTCCCACCCCCT
CCAGGTGGTGCTCCCCCACCACCAGCAGGAAAGAAACCACCAACAGAAGC
CAAATCTGACGGAGATGATCAAGAAGATTTGAAAGCCTTACTAGATGAAA
GTATTGGAAACTTAGTCAAAGCAAATCAAGCTGTAGAAACACTCTTATCT
GCCAGCAGTGGAGGAAACTTAGTCAAAGCAAATCAAGCTGTAGAAACACT
CTTATCTGCCAGCAGTGGAGGATCATCTAGTGGACCCTCTCCATCTGGAG
GTGCTCCCCCACCCGGATCATCTAGTGGACCCTCTCCATCTGGAGGTGCT
CCCCCACCCGGCGGCGCTCCTCCACCAGGTGGTGCTCCTCCTCCAGGCGG
TGCTCCTCCACCACCAGGTGGCGCCCCTCCCACTGAGGCTAAACCAGATG
AGGCTGCTGGTGCTCCTCCCCCTCCTGGTGGTGCCGGTGGCGCTCCTGGA
GCAGCAGGTGGCAAAGGTGGAGACTGCACTGGTTGCGAAAACCCATACTG
CTGTGCCGAACCCTTTGGAGCTACCTCAACTGTTATTCATTTCCCAGCAC
CACCATGTGCCTGTGCTCCCCCACCACCACCTTGTATGGCAATGCCATGT
CCACCACCCCCTCCTCCATGTGCTTGCGGCGCTCCTCCACCAGGTGGTGC
TCCTCCTCCAGGCGGTGCTCCTCCACCACCAGGTGGCGCCCCTCCCACTG
AGGCTAAACCAGATGAGGCTGCTGGTGCTCCTCCCCCTCCTGGTGGTGCC
GGTGGCGCTCCTGGAGCAGCAGGTGGCAAAGGTGGAGACTGCACTGGTTG
CGAAAACCCATACTGCTGTGCCGAACCCTTTGGAGCTACCTCAACTGTTA
TTCATTTCCCAGCACCACCATGTGCCTGTGCTCCCCCACCACCACCTTGT
ATGGCAATGCCATGTCCACCACCCCCTCCTCCATGTGCTTCCACCACCAC
CATGCCCAGTACCATGTCCTGCACCTTGTCCAGTAGCATGTGCACCTCCA
CCACCACCACCTTGTGCACCAGCCTGTATGCCCCCAGCTTGTGGACCAAC
CTGCAGTCGCGATTGTTGTGACCACCACCACCATGCCCAGTACCATGTCC
TGCACCTTGTCCAGTAGCATGTGCACCTCCACCACCACCACCTTGTGCAC
CAGCCTGTATGCCCCCAGCTTGTGGACCAACCTGCAGTCGCGATTGTTGT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:502492..506273 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1348-1476:130 |
| Aaloc | 1033-1344:569 |
| Aaloc | 988-1029:842 |
| Aaloc | 931-984:994 |
| Aaloc | 499-927:1784 |
| Aaloc | 238-495:2262 |
| Aaloc | 76-234:2914 |
| Aaloc | 1-72:3783 |
|
